Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  X-RAY STRUCTURE OF ACETYLCHOLINE BINDING PROTEIN (ACHBP) IN COMPLEX WITH 6-(4-METHOXYPHENYL)-N4-OCTYLPYRIMIDINE-2,4-DIAMINE
 
Authors :  K. Kaczanowska, M. Harel, Z. Radic', J. -P. Changeux, M. G. Finn, P. Tayl
Date :  03 May 14  (Deposition) - 16 Jul 14  (Release) - 13 Aug 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J
Biol. Unit 1:  A,B,C,D,E  (1x)
Biol. Unit 2:  F,G,H,I,J  (1x)
Keywords :  Acetylcholine-Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Kaczanowska, M. Harel, Z. Radic, J. P. Changeux, M. G. Finn, P. Taylo
Structural Basis For Cooperative Interactions Of Substitute 2-Aminopyrimidines With The Acetylcholine Binding Protein.
Proc. Natl. Acad. Sci. Usa V. 111 10749 2014
PubMed-ID: 25006260  |  Reference-DOI: 10.1073/PNAS.1410992111

(-) Compounds

Molecule 1 - ACETYLCHOLINE-BINDING PROTEIN
    Chains: A, B, C, D, E, F, G, H, I, J
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293S-GNT1
    Expression System Common: HUMAN
    Expression System Plasmid: PFLAG-CMV3
    Expression System Taxid: 9606
    Organism Common: GREAT POND SNAIL
    Organism Scientific: LYMNAEA STAGNALIS
    Organism Taxid: 6523
    Synonym: ACH-BINDING PROTEIN, ACHBP

 Structural Features

(-) Chains, Units

  12345678910
Asymmetric Unit : ABCDEFGHIJ
Biological Unit 1 (1x): ABCDE     
Biological Unit 2 (1x):      FGHIJ

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 39)

Asymmetric Unit (3, 39)
No.NameCountTypeFull Name
1KK110Ligand/Ion6-(4-METHOXYPHENYL)-N~4~-OCTYLPYRIMIDINE-2,4-DIAMINE
2NAG10Ligand/IonN-ACETYL-D-GLUCOSAMINE
3PO419Ligand/IonPHOSPHATE ION
Biological Unit 1 (3, 22)
No.NameCountTypeFull Name
1KK15Ligand/Ion6-(4-METHOXYPHENYL)-N~4~-OCTYLPYRIMIDINE-2,4-DIAMINE
2NAG5Ligand/IonN-ACETYL-D-GLUCOSAMINE
3PO412Ligand/IonPHOSPHATE ION
Biological Unit 2 (3, 17)
No.NameCountTypeFull Name
1KK15Ligand/Ion6-(4-METHOXYPHENYL)-N~4~-OCTYLPYRIMIDINE-2,4-DIAMINE
2NAG5Ligand/IonN-ACETYL-D-GLUCOSAMINE
3PO47Ligand/IonPHOSPHATE ION

(-) Sites  (38, 38)

Asymmetric Unit (38, 38)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETYR A:89 , LYS A:139 , SER A:142 , TRP A:143 , TYR A:192 , TRP B:53 , LEU B:102 , LEU B:112BINDING SITE FOR RESIDUE KK1 A 301
02AC2SOFTWAREASN A:66 , SER A:68 , ASP I:-4BINDING SITE FOR RESIDUE NAG A 302
03AC3SOFTWAREASP A:17 , VAL A:18 , ILE A:19 , HIS A:145 , ARG B:3 , VAL B:74 , SER B:75BINDING SITE FOR RESIDUE PO4 A 303
04AC4SOFTWAREARG A:3 , VAL A:74 , SER A:75 , ASP E:17 , VAL E:18 , ILE E:19 , HIS E:145BINDING SITE FOR RESIDUE PO4 A 304
05AC5SOFTWAREVAL A:41 , GLU A:43 , HOH A:407BINDING SITE FOR RESIDUE PO4 A 305
06AC6SOFTWARETYR B:89 , LYS B:139 , SER B:142 , TRP B:143 , VAL B:183 , TYR B:192 , TRP C:53 , LEU C:112 , MET C:114BINDING SITE FOR RESIDUE KK1 B 301
07AC7SOFTWAREASN B:66 , SER B:68BINDING SITE FOR RESIDUE NAG B 302
08AC8SOFTWAREILE B:6 , ASN B:9 , ASN B:66 , SER B:70 , LEU H:1 , ASP H:2 , ASP H:5BINDING SITE FOR RESIDUE PO4 B 303
09AC9SOFTWARETYR C:89 , SER C:142 , TRP C:143 , TYR C:192 , ILE D:36 , TRP D:53 , LEU D:112 , TYR D:164 , SER D:166BINDING SITE FOR RESIDUE KK1 C 301
10BC1SOFTWAREASN C:66 , SER C:68 , HIS C:69 , SER I:159 , ASP I:160 , VAL I:176BINDING SITE FOR RESIDUE NAG C 302
11BC2SOFTWAREASP B:17 , VAL B:18 , ILE B:19 , HIS B:145 , ARG C:3 , VAL C:74 , SER C:75BINDING SITE FOR RESIDUE PO4 C 303
12BC3SOFTWAREASP C:17 , VAL C:18 , ILE C:19 , HIS C:145 , ARG D:3 , VAL D:74 , SER D:75BINDING SITE FOR RESIDUE PO4 C 304
13BC4SOFTWAREVAL C:41 , VAL C:128 , ASP C:129 , ARG C:170BINDING SITE FOR RESIDUE PO4 C 305
14BC5SOFTWARETYR D:89 , SER D:142 , TRP D:143 , TYR D:185 , CYS D:188 , TYR D:192 , TRP E:53 , ARG E:104 , LEU E:112 , TYR E:164 , SER E:166BINDING SITE FOR RESIDUE KK1 D 301
15BC6SOFTWAREASN D:66 , SER D:68BINDING SITE FOR RESIDUE NAG D 302
16BC7SOFTWAREVAL D:41 , HOH D:417 , HOH D:418 , HOH D:420BINDING SITE FOR RESIDUE PO4 D 303
17BC8SOFTWARETRP A:53 , LEU A:112 , MET A:114 , TYR E:89 , LYS E:139 , SER E:142 , TRP E:143 , VAL E:183 , TYR E:192BINDING SITE FOR RESIDUE KK1 E 301
18BC9SOFTWAREASN E:66 , SER E:68 , HIS J:69BINDING SITE FOR RESIDUE NAG E 302
19CC1SOFTWAREASP D:17 , VAL D:18 , ILE D:19 , HIS D:145 , ARG E:3 , SER E:75BINDING SITE FOR RESIDUE PO4 E 303
20CC2SOFTWAREGLU E:40 , ARG E:120BINDING SITE FOR RESIDUE PO4 E 304
21CC3SOFTWARESER D:186 , LYS E:34 , SER E:159 , TYR E:164BINDING SITE FOR RESIDUE PO4 E 305
22CC4SOFTWARETYR F:89 , LYS F:139 , SER F:142 , TRP F:143 , ASN F:181 , VAL F:183 , TYR F:192 , TRP G:53 , LEU G:112 , MET G:114 , TYR G:164BINDING SITE FOR RESIDUE KK1 F 301
23CC5SOFTWAREASN F:66 , HIS F:69BINDING SITE FOR RESIDUE NAG F 302
24CC6SOFTWAREARG F:3 , VAL F:74 , SER F:75 , ASP J:17 , ILE J:19 , HIS J:145BINDING SITE FOR RESIDUE PO4 F 303
25CC7SOFTWAREASP D:2 , ASP D:5 , ASP F:2 , ASN F:9 , ASN F:66 , SER F:70BINDING SITE FOR RESIDUE PO4 F 304
26CC8SOFTWARETYR G:89 , SER G:142 , TRP G:143 , TYR G:192 , LEU H:112BINDING SITE FOR RESIDUE KK1 G 301
27CC9SOFTWARELYS C:-5 , ASP C:-4 , ASN G:66 , SER G:68BINDING SITE FOR RESIDUE NAG G 302
28DC1SOFTWAREASP F:17 , VAL F:18 , ILE F:19 , HIS F:145 , ARG G:3 , VAL G:74 , SER G:75BINDING SITE FOR RESIDUE PO4 G 303
29DC2SOFTWARELEU C:1 , ASP C:2 , ASP C:5 , ILE G:6 , ASN G:66 , SER G:70BINDING SITE FOR RESIDUE PO4 G 304
30DC3SOFTWARETYR H:89 , SER H:142 , TRP H:143 , TYR H:192 , ARG I:104 , LEU I:112BINDING SITE FOR RESIDUE KK1 H 301
31DC4SOFTWAREASP B:-4 , ASN H:66 , SER H:68BINDING SITE FOR RESIDUE NAG H 302
32DC5SOFTWAREASP G:17 , VAL G:18 , ILE G:19 , HIS G:145 , ARG H:3 , VAL H:74 , SER H:75BINDING SITE FOR RESIDUE PO4 H 303
33DC6SOFTWAREASP H:17 , VAL H:18 , ILE H:19 , HIS H:145 , ARG I:3 , VAL I:74 , SER I:75BINDING SITE FOR RESIDUE PO4 H 304
34DC7SOFTWARETYR I:89 , LYS I:139 , SER I:142 , TRP I:143 , VAL I:183 , TYR I:192 , TRP J:53 , ARG J:104 , LEU J:112BINDING SITE FOR RESIDUE KK1 I 301
35DC8SOFTWAREGLU C:163 , ASN I:66 , SER I:68BINDING SITE FOR RESIDUE NAG I 302
36DC9SOFTWARELEU F:112 , TYR F:113 , MET F:114 , HOH F:405 , TYR J:89 , SER J:142 , TRP J:143 , TYR J:192BINDING SITE FOR RESIDUE KK1 J 301
37EC1SOFTWAREASP E:-4 , HIS E:69 , ASN J:66 , SER J:68 , HIS J:69BINDING SITE FOR RESIDUE NAG J 302
38EC2SOFTWAREASP I:17 , VAL I:18 , ILE I:19 , HIS I:145 , ARG J:3 , VAL J:74 , SER J:75BINDING SITE FOR RESIDUE PO4 J 303

(-) SS Bonds  (11, 11)

Asymmetric Unit
No.Residues
1A:123 -A:136
2B:123 -B:136
3C:123 -C:136
4D:123 -D:136
5D:187 -D:188
6E:123 -E:136
7F:123 -F:136
8G:123 -G:136
9H:123 -H:136
10I:123 -I:136
11J:123 -J:136

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Thr A:155 -Thr A:156
2Glu A:157 -Asn A:158
3Asp A:160 -Asp A:161
4Asp D:160 -Asp D:161

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4QAA)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4QAA)

(-) Exons   (0, 0)

(no "Exon" information available for 4QAA)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:207
                                                                                                                                                                                                                                               
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhh............eeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee................eeeeeeeeeee......eeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qaa A  -7 DYKDDDDKLDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVEAYEDVEVSLNFRKKG 205
                                     2        12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182||     198       
                                                                                                                                                                                                                        183|               
                                                                                                                                                                                                                         190               


Chain B from PDB  Type:PROTEIN  Length:207
                                                                                                                                                                                                                                               
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhh............eeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee................eeeeeeeeeeeee....eeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qaa B  -5 KDDDDKLDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTPEAYEDVEVSLNFRKKG 205
                                     4        14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184|      198       
                                                                                                                                                                                                                       184|                
                                                                                                                                                                                                                        189                


Chain C from PDB  Type:PROTEIN  Length:209
                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhh.hhhhhhhhhhhhhhhh............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeee....ee...........eeeeeeeeeeeee....eeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qaa C  -7 DYKDDDDKLDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTPEAYEDVEVSLNFRKKG 205
                                     2        12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182 ||    196         
                                                                                                                                                                                                                         184|                
                                                                                                                                                                                                                          189                


Chain D from PDB  Type:PROTEIN  Length:213
                                                                                                                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhh.hhhhhhhhhhhhhhhh............eeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee................eeeeeeeeeeeee........eeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qaa D  -7 DYKDDDDKLDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 205
                                     2        12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202   


Chain E from PDB  Type:PROTEIN  Length:205
                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhh.hhhhhhhhhhhhhhhh............eeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeee..............eeeeeeeeeeeee...eeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qaa E  -7 DYKDDDDKLDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTSDDSEYFSQYSRFEILDVTQKKNSVTEAYEDVEVSLNFRKKG 205
                                     2        12        22        32        42        52        62        72        82        92       102       112       122       132       142       152  ||   165       175       190       200     
                                                                                                                                                                                            155|                      184|               
                                                                                                                                                                                             159                       190               


Chain F from PDB  Type:PROTEIN  Length:209
                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhh............eeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh........eeeehhhhh....eee.......ee.....eeee...eeee..eeeeeee...........eeeeeeeee.......eeee...ee...........eeeeeeeeeeeee.....eeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qaa F  -7 DYKDDDDKLDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTENSDDSEYFSQYSRFEILDVTQKKNSVTCPEAYEDVEVSLNFRKKG 205
                                     2        12        22        32        42        52        62        72        82        92       102       112       122       132       142       152  ||   163       173       183||     196         
                                                                                                                                                                                            155|                        184|                 
                                                                                                                                                                                             157                         188                 


Chain G from PDB  Type:PROTEIN  Length:208
                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhh.hhhhhhhhhhhhhhhh............eeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeee....ee.........eeeeeeeeeeeee.....eeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qaa G  -7 DYKDDDDKLDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSSEYFSQYSRFEILDVTQKKNSVTYPEAYEDVEVSLNFRKKG 205
                                     2        12        22        32        42        52        62        72        82        92       102       112       122       132       142       152      |164       174       184||     197        
                                                                                                                                                                                                159|                    185|                
                                                                                                                                                                                                 162                     189                


Chain H from PDB  Type:PROTEIN  Length:207
                                                                                                                                                                                                                                               
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhh.hhhhhhhhhhhhhhhh............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeee.............eeeeeeeeeeeeee....eeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qaa H  -7 DYKDDDDKLDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTDDSEYFSQYSRFEILDVTQKKNSVTYSPEAYEDVEVSLNFRKKG 205
                                     2        12        22        32        42        52        62        72        82        92       102       112       122       132       142       152  ||   166       176       186|      198       
                                                                                                                                                                                            155|                       186|                
                                                                                                                                                                                             160                        189                


Chain I from PDB  Type:PROTEIN  Length:207
                                                                                                                                                                                                                                               
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhh.hhhhhhhhhhhhhhhh............eeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eee...............eeeeeeeeeee.........eeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qaa I  -7 DYKDDDDKLDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTSDDSEYFSQYSRFEILDVTQKKNSVTYPEAYEDVEVSLNFRKKG 205
                                     2        12        22        32        42        52        62        72        82        92       102       112       122       132       142       152  ||   165       175       185|      198       
                                                                                                                                                                                            155|                       185|                
                                                                                                                                                                                             159                        189                


Chain J from PDB  Type:PROTEIN  Length:206
                                                                                                                                                                                                                                              
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhh............eeeeeeeeeeeeeeee....eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee...ee...........eeeeeeeeeee.....eeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qaa J  -7 DYKDDDDKLDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSEAYEDVEVSLNFRKKG 205
                                     2        12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182|      199      
                                                                                                                                                                                                                       182|               
                                                                                                                                                                                                                        190
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4QAA)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4QAA)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4QAA)

(-) Gene Ontology  (9, 9)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    KK1  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NAG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    PO4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
    CC7  [ RasMol ]  +environment [ RasMol ]
    CC8  [ RasMol ]  +environment [ RasMol ]
    CC9  [ RasMol ]  +environment [ RasMol ]
    DC1  [ RasMol ]  +environment [ RasMol ]
    DC2  [ RasMol ]  +environment [ RasMol ]
    DC3  [ RasMol ]  +environment [ RasMol ]
    DC4  [ RasMol ]  +environment [ RasMol ]
    DC5  [ RasMol ]  +environment [ RasMol ]
    DC6  [ RasMol ]  +environment [ RasMol ]
    DC7  [ RasMol ]  +environment [ RasMol ]
    DC8  [ RasMol ]  +environment [ RasMol ]
    DC9  [ RasMol ]  +environment [ RasMol ]
    EC1  [ RasMol ]  +environment [ RasMol ]
    EC2  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Asp A:160 - Asp A:161   [ RasMol ]  
    Asp D:160 - Asp D:161   [ RasMol ]  
    Glu A:157 - Asn A:158   [ RasMol ]  
    Thr A:155 - Thr A:156   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format | Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  4qaa
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  ACHP_LYMST | P58154
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  ACHP_LYMST | P58154
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ACHP_LYMST | P58154: 1i9b 1uv6 1uw6 1ux2 1yi5 2zju 2zjv 3u8j 3u8k 3u8l 3u8m 3u8n 3wip 3wth 3wti 3wtj 3wtk 3wtl 3wtm 3wtn 3wto 3zdg 3zdh 4alx 4hqp 4nzb 4qab 4qac 4um1 4um3 4zjt 4zk1 4zr6 4zru 5afh 5afj 5afk 5afl 5afm 5afn 5bp0 5j5f 5j5g 5j5h 5j5i 5t90

(-) Related Entries Specified in the PDB File

1uv6 1uw6 1ux2 4qab 4qac