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(-) Description

Title :  STRUCTURE OF P. VULGARIS HIGB TOXIN
 
Authors :  M. A. Schureck, J. A. Dunkle, T. Maehigashi, C. M. Dunham
Date :  22 Mar 14  (Deposition) - 21 Oct 15  (Release) - 25 Nov 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.25
Chains :  Asym./Biol. Unit :  A
Keywords :  Bacterial Toxins, Biofilms, Cell Metabolism, Energy Metabolism, Microbial Pathogenesis, Stress Response, Stringent Response, Translation Control, Toxin, Microbial Rnase Fold, Ribosome-Dependent Mrna Interferase, Host Inhibition Of Growth A, Mrna, And Ribosome (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. A. Schureck, J. A. Dunkle, T. Maehigashi, S. J. Miles, C. M. Dunham
Defining The Mrna Recognition Signature Of A Bacterial Toxi Protein.
Proc. Natl. Acad. Sci. Usa V. 112 13862 2015
PubMed-ID: 26508639  |  Reference-DOI: 10.1073/PNAS.1512959112

(-) Compounds

Molecule 1 - KILLER PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PBAD/MYC-HISA
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: HIGB
    Organism Scientific: PROTEUS VULGARIS
    Organism Taxid: 585
    Strain: UR-75

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric/Biological Unit (1, 4)
No.NameCountTypeFull Name
1CL4Ligand/IonCHLORIDE ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:4 , PHE A:5 , LYS A:11 , HOH A:328BINDING SITE FOR RESIDUE CL A 201
2AC2SOFTWAREGLU A:42 , ILE A:43 , HOH A:369BINDING SITE FOR RESIDUE CL A 202
3AC3SOFTWAREHOH A:360 , HOH A:392BINDING SITE FOR RESIDUE CL A 203
4AC4SOFTWARELEU A:12 , HOH A:310BINDING SITE FOR RESIDUE CL A 204

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4PX8)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4PX8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4PX8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4PX8)

(-) Exons   (0, 0)

(no "Exon" information available for 4PX8)

(-) Sequences/Alignments

Asymmetric/Biological Unit
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:99
                                                                                                                                  
               SCOP domains --------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.ee.hhhhh..eeeeee..eeeeeeee..eeeeeeeee.hhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------- Transcript
                  4px8 A  1 GIKSFKHKGLKLLFEKGVTSGVPAQDVDRINDRLQAIDTATEIGELNRQIYKLHPLKGDREGYWSITVRANWRITFQFINGDAYILNYEDYHKLGPEQK 99
                                    10        20        30        40        50        60        70        80        90
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4PX8)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4PX8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4PX8)

(-) Gene Ontology  (15, 15)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HIGB_PROVU | Q7A225: 4mct 4mcx 4w4g 4ypb 4yy3 4yzv 4zsn 5iwh 5ixl

(-) Related Entries Specified in the PDB File

4mct STRUCTURE OF TOXIN-ANTITOXIN COMPLEX
4mcx STRUCTURE OF TOXIN-ANTITOXIN COMPLEX
4pxr
4w4g
4ypb
4yzv