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(-) Description

Title :  CRYSTAL STRUCTURE OF MARBURG VIRUS VP24
 
Authors :  A. P. P. Zhang, Z. Bornholdt, D. Abelson, E. O. Saphire
Date :  11 Feb 14  (Deposition) - 26 Mar 14  (Release) - 07 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.65
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Marburg, Vp24, Pyramidal Fold, Protein, Ebola, Virus, Viral, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. P. Zhang, Z. A. Bornholdt, D. M. Abelson, E. O. Saphire
Crystal Structure Of Marburg Virus Vp24.
J. Virol. V. 88 5859 2014
PubMed-ID: 24574400  |  Reference-DOI: 10.1128/JVI.03565-13

(-) Compounds

Molecule 1 - MEMBRANE-ASSOCIATED PROTEIN VP24
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: VP24
    Gene: VP24
    Organism Common: MARV
    Organism Scientific: MARBURG VIRUS - MUSOKE, KENYA, 1980
    Organism Taxid: 33727
    Strain: MUSOKE-80

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4OR8)

(-) Sites  (0, 0)

(no "Site" information available for 4OR8)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4OR8)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4OR8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4OR8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4OR8)

(-) Exons   (0, 0)

(no "Exon" information available for 4OR8)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:225
                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eee.................eeee..eeeeee..eeeeee..hhhhhhhhhhh..hhhhhhhhhhhhhhhh...eee.hhhhhhhhhhhhhh.hhhhhh..hhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhh............eeeeee..eeeeeeee..eeeeeeee...eeeeeeeehhhhhh.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4or8 A  -2 DDKMAELSTRYNLPNLDLNSTARWIKEPSVGGWTVKWGNFVFHIPNTGMTLLHHLKSNFVVPEWQQTRNLFSHLFKNPKSTIIEPFLALRILLGVALKDQELQQSLIPGFRSIVHMLSEWLLLEVTSAIHISPNLLGIYLTSDMFKILMAGVKNFFNKMFTLHVVNDHGKPSSIEIKLTGQQIIITRVNMGFLVEVRRISESVVFGLVAEAVLREHSQMEKGQPL 241
                                     7   ||   25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       216       226       236     
                                        11|                                                                                                                                                                                     204|                         
                                         20                                                                                                                                                                                      216                         


Chain B from PDB  Type:PROTEIN  Length:226
                                                                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee........hhhhhhh.eeeee..eeeeee..eeeeee..hhhhhhhh.....hhhhhhhhhhhhhhhh....ee.hhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhh............eeeee....eeeeee...eeeeeeeeeeee...eeeeeeeeeeeehhhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4or8 B   2 AELSTRYNLPALDLNSTARWIKEPSVGGWTVKWGNFVFHIPNTGMTLLHHLKSNFVVPEWQQTRNLFSHLFKNPKSTIIEPFLALRILLGVALKDQELQQSLIPGFRSIVHMLSEWLLLEVTSAIHISPNLLGIYLTSDMFKILMAGVKNFFNKMFTLHVVNDHGKPSSIEIKLTGQQIIITRVNMGFLVEVRRIDIEPETVLSESVVFGLVAEAVLREHSQGQPL 241
                                    11||      29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       212       222       232 ||   
                                     12|                                                                                                                                                                                        208|                   234|   
                                      21                                                                                                                                                                                         212                    238
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4OR8)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4OR8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4OR8)

(-) Gene Ontology  (10, 10)

Asymmetric/Biological Unit(hide GO term definitions)

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  4or8
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  VP24_MABVM | P35256
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