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(-) Description

Title :  PROTEOLYSIS INSIDE THE MEMBRANE IS A RATE-GOVERNED REACTION NOT DRIVEN BY SUBSTRATE AFFINITY
 
Authors :  S. W. Dickey, R. P. Baker, S. Cho, S. Urban
Date :  11 Nov 13  (Deposition) - 25 Dec 13  (Release) - 01 Jan 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (2x)
Biol. Unit 3:  A  (3x)
Biol. Unit 4:  A  (6x)
Keywords :  Intramembrane Protease, Rhomboid Protease, Hydrolase-Membrane Protein Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. W. Dickey, R. P. Baker, S. Cho, S. Urban
Proteolysis Inside The Membrane Is A Rate-Governed Reaction Not Driven By Substrate Affinity.
Cell(Cambridge, Mass. ) V. 155 1270 2013
PubMed-ID: 24315097  |  Reference-DOI: 10.1016/J.CELL.2013.10.053

(-) Compounds

Molecule 1 - RHOMBOID PROTEASE GLPG
    Chains: A
    EC Number: 3.4.21.105
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 87-276
    Gene: GLPG, B3424, JW5687
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Synonym: INTRAMEMBRANE SERINE PROTEASE

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (2x): A
Biological Unit 3 (3x): A
Biological Unit 4 (6x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4NJP)

(-) Sites  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4NJP)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4NJP)

(-) Exons   (0, 0)

(no "Exon" information available for 4NJP)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:182
                                                                                                                                                                                                                      
               SCOP domains d4njpa_ A: GlpG                                                                                                                                                                        SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhh...hhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4njp A  91 ERAGPVTWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNA 272
                                   100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Membrane and cell surface proteins and peptides (2046)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4NJP)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4NJP)

(-) Gene Ontology  (11, 11)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GLPG_ECOLI | P09391: 2ic8 2irv 2lep 2nrf 2o7l 2xov 2xow 2xtu 2xtv 3b44 3b45 3txt 3ubb 3zeb 3zmh 3zmi 3zmj 3zot 4h1d 4hdd 4njn 5f5b 5f5d 5f5g 5f5j 5f5k

(-) Related Entries Specified in the PDB File

2ic8 THE SAME PROTEIN CRYSTALLIZED AT DIFFERENT PH
4njn