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(-) Description

Title :  HUMAN ENHANCER OF ZESTE (DROSOPHILA) HOMOLOG 2(EZH2)
 
Authors :  A. Dong, H. Zeng, H. He, A. Wernimont, C. Bountra, C. H. Arrowsmith, A. M. P. J. Brown, H. Wu, Structural Genomics Consortium (Sgc)
Date :  30 Aug 13  (Deposition) - 25 Sep 13  (Release) - 18 Mar 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A
Keywords :  Ezh2, Gene Regulation, Chromatin Modification, Histone Methyltransferase, Transcription, Gene Silencing, Polycomb Repressive Complex 2, Structural Genomics, Structural Genomics Consortium, Sgc, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  H. Wu, H. Zeng, A. Dong, F. Li, H. He, G. Senisterra, A. Seitova, S. Duan, P. J. Brown, M. Vedadi, C. H. Arrowsmith, M. Schapira
Structure Of The Catalytic Domain Of Ezh2 Reveals Conformational Plasticity In Cofactor And Substrate Binding Sites And Explains Oncogenic Mutations.
Plos One V. 8 83737 2013
PubMed-ID: 24367611  |  Reference-DOI: 10.1371/JOURNAL.PONE.0083737

(-) Compounds

Molecule 1 - HISTONE-LYSINE N-METHYLTRANSFERASE EZH2
    ChainsA
    EC Number2.1.1.43
    EngineeredYES
    Expression SystemSPODOPTERA FRUGIPERDA
    Expression System Cell LineSF9
    Expression System CommonFALL ARMYWORM
    Expression System Taxid7108
    Expression System VectorPFBOH-LIC-C-HIS
    Expression System Vector TypeBACULOVIRUS
    FragmentUNP RESIDUES 520-746
    GeneEZH2, KMT6
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymENX-1, ENHANCER OF ZESTE HOMOLOG 2, LYSINE N- METHYLTRANSFERASE 6

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 10)

Asymmetric/Biological Unit (2, 10)
No.NameCountTypeFull Name
1UNX4Ligand/IonUNKNOWN ATOM OR ION
2ZN6Ligand/IonZINC ION

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:566 , CYS A:580 , CYS A:588 , CYS A:601BINDING SITE FOR RESIDUE ZN A 801
2AC2SOFTWARECYS A:560 , CYS A:573 , CYS A:580 , CYS A:585BINDING SITE FOR RESIDUE ZN A 802
3AC3SOFTWARECYS A:560 , CYS A:562 , CYS A:566 , CYS A:571BINDING SITE FOR RESIDUE ZN A 803
4AC4SOFTWARECYS A:530 , CYS A:543 , CYS A:549 , CYS A:553BINDING SITE FOR RESIDUE ZN A 804
5AC5SOFTWARECYS A:523 , HIS A:525 , CYS A:530 , CYS A:534BINDING SITE FOR RESIDUE ZN A 805
6AC6SOFTWARECYS A:523 , CYS A:536 , CYS A:543 , CYS A:547BINDING SITE FOR RESIDUE ZN A 806

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4MI0)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4MI0)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4MI0)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:208
                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhh...............................hhhhhh...........................hhhhhh....eeeee.....eeeee........eeee...eeeehhhhhhhhhh......eee....eeee.....hhhhhhee.....eeeeeeee..eeeeeeee..........ee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4mi0 A 520 YQPCDHPRQPCDSSCPCVIAQNFCEKFCQCSSECQNRFPGCRCKAQCNTKQCPCYLAVRECDPDLCLTCGAADHWDSKNVSCKNCSIQRGSKKHLLLAPSDVAGWGIFIKDPVQKNEFISEYCGEIISQDEADRRGKVKYMCSFLFNLNNDFVVDATRKGNKIRFANHSVNPNCYAKVMMVNGDHRIGIFAKRAIQTGEELFFDYRYS 729
                                   529       539       549       559       569       579       589       599       609       619       629       639       649       661       671       681       691       701       711       721        
                                                                                                                                                                   657|                                                                     
                                                                                                                                                                    660                                                                     

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4MI0)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MI0)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (59, 59)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        EZH2_HUMAN | Q159102c6v 4mi5 5gsa 5h14 5h15 5h17 5h19 5h24 5h25 5hyn 5ij7 5ij8 5ls6 5u5t 5u62 5wuk

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4MI0)