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(-) Description

Title :  CRYSTAL STRUCTURE OF DNA DUPLEX CONTAINING CONSECUTIVE T-T MISPAIRS (BR-DERIVATIVE)
 
Authors :  J. Kondo, T. Yamada, C. Hirose, Y. Tanaka, A. Ono
Date :  04 Jun 13  (Deposition) - 05 Mar 14  (Release) - 05 Mar 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym./Biol. Unit :  A,B
Keywords :  T-T Mispair, A-T-T Triplet, Non-Helical Dna Duplex, Dna (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. Kondo, T. Yamada, C. Hirose, I. Okamoto, Y. Tanaka, A. Ono
Crystal Structure Of Metallo Dna Duplex Containing Consecutive Watson-Crick-Like T-Hg(Ii) -T Base Pairs
Angew. Chem. Int. Ed. Engl. V. 53 2385 2014
PubMed-ID: 24478025  |  Reference-DOI: 10.1002/ANIE.201309066

(-) Compounds

Molecule 1 - DNA (5'-D(*CP*GP*(CBR)P*GP*AP*TP*TP*TP*CP*GP*CP*G)-3')
    ChainsA, B
    EngineeredYES
    Other DetailsCHEMICALLY SYNTHESIZED
    SyntheticYES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1CBR2Mod. Nucleotide5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE

(-) Sites  (0, 0)

(no "Site" information available for 4L26)

(-) SS Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:DNA  Length:12
                                           
                  4l26 A  1 CGcGATTTCGCG 12
                              |     10  
                              |         
                              3-CBR     

Chain B from PDB  Type:DNA  Length:12
                                           
                  4l26 B  1 CGcGATTTCGCG 12
                              |     10  
                              3-CBR     

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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 Related Entries

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(-) Related Entries Specified in the PDB File

4l24 4l25