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(-) Description

Title :  LIGAND CONCENTRATION REGULATES THE PATHWAYS OF COUPLED PROTEIN FOLDING AND BINDING
 
Authors :  N. K. Tonthat
Date :  28 Feb 13  (Deposition) - 22 Jan 14  (Release) - 05 Feb 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A
Keywords :  Rna-Binding, Endonuclease, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  K. G. Daniels, N. K. Tonthat, D. R. Mcclure, Y. C. Chang, X. Liu, M. A. Schumacher, C. A. Fierke, S. C. Schmidler, T. G. Oas
Ligand Concentration Regulates The Pathways Of Coupled Protein Folding And Binding.
J. Am. Chem. Soc. V. 136 822 2014
PubMed-ID: 24364358  |  Reference-DOI: 10.1021/JA4086726

(-) Compounds

Molecule 1 - RIBONUCLEASE P PROTEIN COMPONENT
    ChainsA
    EC Number3.1.26.5
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneRNPA, BSSC8_00790
    MutationYES
    Organism ScientificBACILLUS SUBTILIS
    Organism Taxid1423
    SynonymRNASE P PROTEIN, RNASEP PROTEIN, PROTEIN C5

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric/Biological Unit (1, 3)
No.NameCountTypeFull Name
1PPV3Ligand/IonPYROPHOSPHATE

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:3 , ARG A:9 , ARG A:65 , ARG A:68BINDING SITE FOR RESIDUE PPV A 201
2AC2SOFTWARESER A:51 , ASN A:56 , ARG A:88 , LYS A:89BINDING SITE FOR RESIDUE PPV A 202
3AC3SOFTWAREARG A:60 , HIS A:105 , HOH A:312BINDING SITE FOR RESIDUE PPV A 203

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4JG4)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Lys A:114 -Lys A:115

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4JG4)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4JG4)

(-) Exons   (0, 0)

(no "Exon" information available for 4JG4)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:114
                                                                                                                                                  
               SCOP domains d4jg4a_ A: automated matches                                                                                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhh..hhhhhhhhhhhheeee...eeeeee........eeeeee.....hhhhhhhhhhhhhhhhhhhh......eeeeee.hhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 4jg4 A   2 AHLKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQAENDELRVGLSVSKKIGNAVMRNRIKRLIRQAFLEEKERLKEKDYIIIARKAASQLTYEETKKSLQHLWRKSSLYKK 115
                                    11        21        31        41        51        61        71        81        91       101       111    

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4JG4)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4JG4)

(-) Gene Ontology  (11, 22)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

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        RNPA_BACSU | P258141a6f

(-) Related Entries Specified in the PDB File

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