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(-) Description

Title :  CRYSTAL STRUCTURE OF CK1E IN COMPLEX WITH PF4800567
 
Authors :  X. Huang, A. M. Long, H. Zhao
Date :  19 Oct 12  (Deposition) - 14 Nov 12  (Release) - 02 Jan 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.74
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Ck1E, Kinase, Inhibitor, Pf4800567, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. M. Long, H. Zhao, X. Huang
Structural Basis For The Potent And Selective Inhibition Of Casein Kinase 1 Epsilon.
J. Med. Chem. V. 55 10307 2012
PubMed-ID: 23106386  |  Reference-DOI: 10.1021/JM301336N

(-) Compounds

Molecule 1 - CASEIN KINASE I ISOFORM EPSILON
    ChainsA, B
    EC Number2.7.11.1
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneCSNK1E
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymCKI-EPSILON, CKIE

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit AB
Biological Unit 1 (1x)A 
Biological Unit 2 (1x) B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 11)

Asymmetric Unit (2, 11)
No.NameCountTypeFull Name
116W2Ligand/Ion3-[(3-CHLOROPHENOXY)METHYL]-1-(TETRAHYDRO-2H-PYRAN-4-YL)-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-AMINE
2SO49Ligand/IonSULFATE ION
Biological Unit 1 (2, 6)
No.NameCountTypeFull Name
116W1Ligand/Ion3-[(3-CHLOROPHENOXY)METHYL]-1-(TETRAHYDRO-2H-PYRAN-4-YL)-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-AMINE
2SO45Ligand/IonSULFATE ION
Biological Unit 2 (2, 5)
No.NameCountTypeFull Name
116W1Ligand/Ion3-[(3-CHLOROPHENOXY)METHYL]-1-(TETRAHYDRO-2H-PYRAN-4-YL)-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-AMINE
2SO44Ligand/IonSULFATE ION

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREILE A:15 , ALA A:36 , MET A:80 , MET A:82 , GLU A:83 , LEU A:84 , LEU A:85 , ASP A:149 , PHE A:150BINDING SITE FOR RESIDUE 16W A 301
02AC2SOFTWAREARG A:127 , LYS A:154 , LYS A:171BINDING SITE FOR RESIDUE SO4 A 302
03AC3SOFTWARETHR A:176 , ALA A:177 , TYR A:225BINDING SITE FOR RESIDUE SO4 A 303
04AC4SOFTWAREARG A:157 , ARG A:192 , LYS A:263 , LYS B:140BINDING SITE FOR RESIDUE SO4 A 304
05AC5SOFTWAREARG A:178 , GLN A:214 , GLY A:215 , LYS A:224 , ILE A:228BINDING SITE FOR RESIDUE SO4 A 305
06AC6SOFTWARELYS A:155 , ASP A:158 , ALA A:159BINDING SITE FOR RESIDUE SO4 A 306
07AC7SOFTWAREARG A:13 , ILE B:15 , ALA B:36 , LYS B:38 , MET B:80 , MET B:82 , GLU B:83 , LEU B:84 , LEU B:85 , LEU B:135 , ASP B:149BINDING SITE FOR RESIDUE 16W B 301
08AC8SOFTWAREARG B:178 , GLN B:214 , GLY B:215 , LYS B:224 , ILE B:228BINDING SITE FOR RESIDUE SO4 B 302
09AC9SOFTWAREARG B:127 , LYS B:154 , LYS B:171BINDING SITE FOR RESIDUE SO4 B 303
10BC1SOFTWARELYS A:140 , ARG B:157 , ARG B:192 , LYS B:263BINDING SITE FOR RESIDUE SO4 B 304
11BC2SOFTWARETHR B:176 , ALA B:177BINDING SITE FOR RESIDUE SO4 B 305

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4HNI)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4HNI)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4HNI)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4HNI)

(-) Exons   (0, 0)

(no "Exon" information available for 4HNI)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:284
                                                                                                                                                                                                                                                                                                                            
               SCOP domains d4hnia_ A: automated matches                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee...ee...eee.....eeeeeee......eeeeeee..hhhhhhh..........eeeeeee..eeeeeee....hhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh..ee....hhh.eee.hhhhh..eee......ee....................hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhh........hhhhhhhhhhhhhhhhh......hhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hni A   3 LRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVHIESKFYKMMQGGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 293
                                    12        22        32        42|       59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289    
                                                                  42|                                                                                                                                                                                                                                                   
                                                                   50                                                                                                                                                                                                                                                   

Chain B from PDB  Type:PROTEIN  Length:284
                                                                                                                                                                                                                                                                                                                            
               SCOP domains d4hnib_ B: automated matches                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee...eeeeeeeeee..eeeeeeee.....eeeeeeee..hhhhhhhh.......eeeeeee..eeeeeee....hhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.hhhhh..eee......ee.........................hhhhhh....hhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.......hhhhhhhhhhhhhhhhh......hhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hni B   1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVESKFYKMMQGGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 293
                                    10        20        30        40 ||     59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289    
                                                                    42|                                                                                                                                                                                                                                                 
                                                                     52                                                                                                                                                                                                                                                 

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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4HNI)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4HNI)

(-) Gene Ontology  (34, 34)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        KC1E_HUMAN | P496744hok

(-) Related Entries Specified in the PDB File

4hnk 4hok