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(-) Description

Title :  CRYSTAL STRUCTURE OF GLYCOPROTEIN C FROM RIFT VALLEY FEVER VIRUS (NON-GLYCOSYLATED)
 
Authors :  M. Dessau, Y. Modis
Date :  12 Oct 12  (Deposition) - 16 Jan 13  (Release) - 13 Feb 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  4.15
Chains :  Asym./Biol. Unit :  A
Keywords :  Virus Entry, Class Ii Fusion Protein, Membrane Fusion, Viral Membrane, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Dessau, Y. Modis
Crystal Structure Of Glycoprotein C From Rift Valley Fever Virus.
Proc. Natl. Acad. Sci. Usa V. 110 1696 2013
PubMed-ID: 23319635  |  Reference-DOI: 10.1073/PNAS.1217780110

(-) Compounds

Molecule 1 - ENVELOPE GLYCOPROTEIN
    Chains: A
    Engineered: YES
    Expression System: UNIDENTIFIED BACULOVIRUS
    Expression System Plasmid: PAC-GP67
    Expression System Taxid: 10469
    Expression System Vector Type: PLASMID
    Organism Common: RVFV
    Organism Scientific: RIFT VALLEY FEVER VIRUS
    Organism Taxid: 11588
    Synonym: GP, M POLYPROTEIN, NON-STRUCTURAL PROTEIN NSM, GLYCOPROTEIN G1, GLYCOPROTEIN G2

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4HJC)

(-) Sites  (0, 0)

(no "Site" information available for 4HJC)

(-) SS Bonds  (12, 12)

Asymmetric/Biological Unit
No.Residues
1A:691 -A:731
2A:704 -A:713
3A:756 -A:852
4A:771 -A:965
5A:777 -A:825
6A:783 -A:832
7A:788 -A:814
8A:818 -A:823
9A:934 -A:947
10A:1029 -A:1101
11A:1039 -A:1042
12A:1049 -A:1083

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4HJC)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4HJC)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4HJC)

(-) Exons   (0, 0)

(no "Exon" information available for 4HJC)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:428
                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee.....eeeee....eeeeeeeeeeee......eeeeeee......eeeeeeeeeeeeeeeeeeeeeee..eeeeeeeeee....................hhhhh........eeeeee....hhhhh.......eeeeeeeeee.....eeeeeeeeeeeeeeeeee.....eeeeee....eee...eeeeeeee.....hhhhheeeee...eeeee...............ee..hhhhhhhh....ee....eeeeee..eeeeee...hhhhhhhhh...eee..eeeee......eeeee.....eeeeeeeeeeeee........eeeeeeeee.......eeeeeeeee...eeeeeee.....eeeeee..eeeeeeeee.....eeeeeeeee.....eeeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4hjc A  691 CSELIQASSRITTCSTEGVNTKCRLSGTALIRAGSVGAEACLMLKGVKEDQTKFLKIKTVSSELSCREGQSYWTGSFSPKCLSSRRCHLVGECHVNRCLSWRDNETSAEFSFVGESTTMRENKCFEQCGGWGCGCFNVNPSCLFVHTYLQSVRKEALRVFNCIDWVHKLTLEITDFDGSVSTIDLGASSSRFTNWGSVSLSLDAEGISGSNSFSFIESPGKGYAIVDEPFSEIPRQGFLGEIRCNSESSVLSAHESCLRAPNLISYKPMIDQLECTTNLIDPFVVFERGSLPQTRNDKTFAASKGNRGVQAFSKGSVQADLTLMFDNFEVDFVGAAVSCDAAFLNLTGCYSCNAGARVCLSITSTGTGSLSAHNKDGSLHIVLPSENGTKDQCQILHFTVPEVEEEFMYSCDGDERPLLVKGTLIAID 1118
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4HJC)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4HJC)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4HJC)

(-) Gene Ontology  (14, 17)

Asymmetric/Biological Unit(hide GO term definitions)

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  GP_RVFV | P03518
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        A2T075_RVFV | A2T075: 4hj1
        GP_RVFV | P03518: 4hj1

(-) Related Entries Specified in the PDB File

4hj1