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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE I 1-320 IN COMPLEX WITH ATP
 
Authors :  M. Zha, C. Zhong, Y. Ou, J. Wang, L. Han, J. Ding
Date :  04 Jun 12  (Deposition) - 23 Jan 13  (Release) - 23 Jan 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  A,B  (3x)
Keywords :  Camk, Calmodulin, Autoinhibition, Regulation Mechanism, Kinase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. Zha, C. Zhong, Y. Ou, L. Han, J. Wang, J. Ding
Crystal Structures Of Human Camkialpha Reveal Insights Into The Regulation Mechanism Of Camki.
Plos One V. 7 44828 2012
PubMed-ID: 23028635  |  Reference-DOI: 10.1371/JOURNAL.PONE.0044828

(-) Compounds

Molecule 1 - CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE TYPE 1
    ChainsA, B
    EC Number2.7.11.17
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPGEX4T-1
    Expression System StrainBL21(DE3)
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentRESIDUES 1-320
    GeneCAMK1
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymCAM KINASE I, CAM-KI, CAM KINASE I ALPHA, CAMKI-ALPHA

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit AB
Biological Unit 1 (1x)A 
Biological Unit 2 (1x) B
Biological Unit 3 (3x)AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
1ATP2Ligand/IonADENOSINE-5'-TRIPHOSPHATE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1ATP1Ligand/IonADENOSINE-5'-TRIPHOSPHATE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1ATP1Ligand/IonADENOSINE-5'-TRIPHOSPHATE
Biological Unit 3 (1, 6)
No.NameCountTypeFull Name
1ATP6Ligand/IonADENOSINE-5'-TRIPHOSPHATE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:27 , THR A:28 , GLY A:29 , ALA A:30 , SER A:32 , VAL A:34 , ALA A:47 , LYS A:49 , GLN A:96 , VAL A:98 , GLU A:102 , ASP A:141 , LYS A:143 , GLU A:145 , ASN A:146 , LEU A:148 , ASP A:162 , HOH A:563BINDING SITE FOR RESIDUE ATP A 401
2AC2SOFTWARELEU B:26 , GLY B:27 , GLY B:29 , ALA B:30 , SER B:32 , VAL B:34 , ALA B:47 , LYS B:49 , VAL B:79 , GLN B:96 , VAL B:98 , GLU B:102 , LYS B:143 , ASN B:146 , LEU B:148 , ASP B:162 , HOH B:550 , HOH B:551 , HOH B:559 , HOH B:564 , HOH B:565BINDING SITE FOR RESIDUE ATP B 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4FG9)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Ser A:239 -Pro A:240
2Ser B:239 -Pro B:240

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4FG9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4FG9)

(-) Exons   (0, 0)

(no "Exon" information available for 4FG9)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:278
                                                                                                                                                                                                                                                                                                                      
               SCOP domains d4fg9a_ A: automated matches                                                                                                                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhh.eeeeeeeee...eeeeeeee.....eeeeeeee...hhhhhhhh........eeeeee...eeeeeee....eehhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh......hhh.eee........eee.......hhhhhh.....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhh.............hhhhhhhhhhhh........hhhhhhhhhhhhh.......hhhhhhhhhhhhh.hhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fg9 A  10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVVR 314
                                    19        29        39        49    ||  68        78        88        98       108       118       128       138       148       158    || 186       196       206       216       226       236       246       256       266       276       286       296       306        
                                                                       54|                                                                                                163|                                                                                                                                    
                                                                        64                                                                                                 182                                                                                                                                    

Chain B from PDB  Type:PROTEIN  Length:279
                                                                                                                                                                                                                                                                                                                       
               SCOP domains d4fg9b_ B: automated matches                                                                                                                                                                                                                                                            SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhh.eeeeeeeee...eeeeeeee.....eeeeeeee..hhhhh.........eeeeee...eeeeee.....eehhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh......hhh.eee........eee....hhhhhhh....hhhhhh.....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhh.............hhhhhhhhhhhh........hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fg9 B  14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVVR 314
                                    23        33        43        53|       75        85        95       105       115       125       135       145       155       175       185       195       205       215       225       235       245       255       265       275       285       295       305         
                                                                  53|                                                                                              163|                                                                                                                                            
                                                                   66                                                                                               174                                                                                                                                            

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4FG9)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4FG9)

(-) Gene Ontology  (36, 36)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        KCC1A_HUMAN | Q140124fg7 4fg8 4fgb

(-) Related Entries Specified in the PDB File

4fg7 4fg8 4fgb