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(-) Description

Title :  CONFORMATIONAL TRANSITION OF FRUCTOSE-1,6-BISPHOSPHATASE: STRUCTURE COMPARISON BETWEEN THE AMP COMPLEX (T FORM) AND THE FRUCTOSE 6-PHOSPHATE COMPLEX (R FORM)
 
Authors :  H. Ke, Y. Zhang, J. -Y. Liang, W. N. Lipscomb
Date :  11 Feb 91  (Deposition) - 15 Jul 92  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Hydrolase (Phosphoric Monoester) (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. M. Ke, J. Y. Liang, Y. P. Zhang, W. N. Lipscomb
Conformational Transition Of Fructose-1, 6-Bisphosphatase: Structure Comparison Between The Amp Complex (T Form) And The Fructose 6-Phosphate Complex (R Form).
Biochemistry V. 30 4412 1991
PubMed-ID: 1850623  |  Reference-DOI: 10.1021/BI00232A007
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - FRUCTOSE 1,6-BISPHOSPHATASE
    Chains: A, B, C, D
    EC Number: 3.1.3.11
    Engineered: YES
    Organism Common: PIG
    Organism Scientific: SUS SCROFA
    Organism Taxid: 9823

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric/Biological Unit (1, 4)
No.NameCountTypeFull Name
1AMP4Ligand/IonADENOSINE MONOPHOSPHATE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL A:17 , GLN A:20 , GLY A:21 , ALA A:24 , GLY A:26 , THR A:27 , GLU A:29 , MET A:30 , THR A:31 , LYS A:112 , TYR A:113 , ARG A:140 , VAL A:160 , MET A:177 , HOH A:628BINDING SITE FOR RESIDUE AMP A 338
2AC2SOFTWAREVAL B:17 , GLN B:20 , GLY B:21 , ALA B:24 , GLY B:26 , THR B:27 , GLY B:28 , GLU B:29 , MET B:30 , THR B:31 , LYS B:112 , TYR B:113 , ARG B:140 , MET B:177 , HOH B:465 , HOH C:409BINDING SITE FOR RESIDUE AMP B 338
3AC3SOFTWAREVAL D:17 , GLN D:20 , GLY D:21 , THR D:27 , GLY D:28 , GLU D:29 , MET D:30 , THR D:31 , LYS D:112 , TYR D:113BINDING SITE FOR RESIDUE AMP C 338
4AC4SOFTWAREVAL C:17 , GLN C:20 , GLY C:21 , GLY C:26 , THR C:27 , GLY C:28 , GLU C:29 , MET C:30 , THR C:31 , LYS C:112 , TYR C:113 , ARG C:140 , VAL C:160 , MET C:177 , HOH D:543BINDING SITE FOR RESIDUE AMP D 338

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4FBP)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4FBP)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4FBP)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4FBP)

(-) Exons   (0, 0)

(no "Exon" information available for 4FBP)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:318
                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains d4fbpa_ A: Fructose-1,6-bisphosphatase                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains 4fbpA01 A:9-199 Fructose-1,6-Bisphosphatase, subunit A, domain 1                                                                                                                      4fbpA02 A:200-334  [code=3.40.190.80, no name defined]                                                                                 - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhh...eeee.......eeee......eeeeee....hhhhh....eeeeeeee.........hhhhh......eeeeeeee...eeeeee....eeeeeee....eeeeeeee.......eeee..........hhhhhhhhhhhh.......eeee...hhhhhhhhhhhh.eeeee...........hhhhhhhhhhhhhhhh..eee...................eeeehhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fbp A   9 NIVTLTRFVMEQGRKARGTGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGIAGSKLDVLSNDLVINVLKSSFATCVLVTEEDKNAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKNSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFMLDPAIGEFILVDRNVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVHRTLVYGGIFMYPANKKSPKGKLRLLYECNPMAYVMEKAGGLATTGKEAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQKHA 335
                                    18        28        38        48        58   ||   77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327        
                                                                                62|                                                                                                                                                                                                                                                                       
                                                                                 72                                                                                                                                                                                                                                                                       


Chain B from PDB  Type:PROTEIN  Length:318
                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains d4fbpb_ B: Fructose-1,6-bisphosphatase                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains 4fbpB01 B:9-199 Fructose-1,6-Bisphosphatase, subunit A, domain 1                                                                                                                      4fbpB02 B:200-334  [code=3.40.190.80, no name defined]                                                                                 - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhh...eeee.......eeee......eeeeee....hhhhh....eeeeeeee.........hhhhh......eeeeeeee...eeeeee....eeeeeee....eeeeeeee.......eeee..........hhhhhhhhhhhh.......eeee...hhhhhhhhhhhh.eeeee...........hhhhhhhhhhhhhhhh..eee...................eeeehhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fbp B   9 NIVTLTRFVMEQGRKARGTGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGIAGSKLDVLSNDLVINVLKSSFATCVLVTEEDKNAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKNSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFMLDPAIGEFILVDRNVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVHRTLVYGGIFMYPANKKSPKGKLRLLYECNPMAYVMEKAGGLATTGKEAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQKHA 335
                                    18        28        38        48        58   ||   77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327        
                                                                                62|                                                                                                                                                                                                                                                                       
                                                                                 72                                                                                                                                                                                                                                                                       


Chain C from PDB  Type:PROTEIN  Length:318
                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains d4fbpc_ C: Fructose-1,6-bisphosphatase                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains 4fbpC01 C:9-199 Fructose-1,6-Bisphosphatase, subunit A, domain 1                                                                                                                      4fbpC02 C:200-334  [code=3.40.190.80, no name defined]                                                                                 - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhh...eeee.......eeee......eeeeee....hhhhh....eeeeeeee.........hhhhh......eeeeeeee...eeeeee....eeeeeee....eeeeeeee.......eeee..........hhhhhhhhhhhh.......eeee...hhhhhhhhhhhh.eeeee...........hhhhhhhhhhhhhhhh..eee...................eeeehhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fbp C   9 NIVTLTRFVMEQGRKARGTGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGIAGSKLDVLSNDLVINVLKSSFATCVLVTEEDKNAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKNSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFMLDPAIGEFILVDRNVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVHRTLVYGGIFMYPANKKSPKGKLRLLYECNPMAYVMEKAGGLATTGKEAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQKHA 335
                                    18        28        38        48        58   ||   77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327        
                                                                                62|                                                                                                                                                                                                                                                                       
                                                                                 72                                                                                                                                                                                                                                                                       


Chain D from PDB  Type:PROTEIN  Length:318
                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains d4fbpd_ D: Fructose-1,6-bisphosphatase                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains 4fbpD01 D:9-199 Fructose-1,6-Bisphosphatase, subunit A, domain 1                                                                                                                      4fbpD02 D:200-334  [code=3.40.190.80, no name defined]                                                                                 - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhh...eeee.......eeee......eeeeee....hhhhh....eeeeeeee.........hhhhh......eeeeeeee...eeeeee....eeeeeee....eeeeeeee.......eeee..........hhhhhhhhhhhh.......eeee...hhhhhhhhhhhh.eeeee...........hhhhhhhhhhhhhhhh..eee...................eeeehhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fbp D   9 NIVTLTRFVMEQGRKARGTGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGIAGSKLDVLSNDLVINVLKSSFATCVLVTEEDKNAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKNSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFMLDPAIGEFILVDRNVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVHRTLVYGGIFMYPANKKSPKGKLRLLYECNPMAYVMEKAGGLATTGKEAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQKHA 335
                                    18        28        38        48        58   ||   77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327        
                                                                                62|                                                                                                                                                                                                                                                                       
                                                                                 72
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric/Biological Unit
(-)
Class: Multi-domain proteins (alpha and beta) (2421)

(-) CATH Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4FBP)

(-) Gene Ontology  (21, 21)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        F16P1_PIG | P00636: 1cnq 1eyi 1eyj 1eyk 1fbc 1fbd 1fbe 1fbf 1fbg 1fbh 1fbp 1fj6 1fj9 1fpb 1fpd 1fpe 1fpf 1fpg 1fpi 1fpj 1fpk 1fpl 1frp 1fsa 1kz8 1lev 1nuw 1nux 1nuy 1nuz 1nv0 1nv1 1nv2 1nv3 1nv4 1nv5 1nv6 1nv7 1q9d 1rdx 1rdy 1rdz 1yxi 1yyz 1yz0 2f3b 2f3d 2fbp 2qvu 2qvv 3fbp 4gbv 4gbw 4gws 4gwu 4gww 4gwx 4gwy 4gwz 4gx3 4gx4 4gx6 4h45 4h46 4kxp 5fbp

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