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(-) Description

Title :  CRYSTAL STRUCTURE OF GLUTAREDOXIN-LIKE NRDH FROM MYCOBACTERIUM TUBERCULOSIS
 
Authors :  S. Phulera, S. C. Mande
Date :  08 May 12  (Deposition) - 08 May 13  (Release) - 26 Jun 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.67
Chains :  Asym./Biol. Unit :  A
Keywords :  Thioredoxin Fold, Nrdh, Glutaredoxin, Electron Transport, Redox Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  S. Phulera, S. C. Mande
The Crystal Structure Of Mycobacterium Tuberculosis Nrdh At 0. 87 A Suggests A Possible Mode Of Its Activity.
Biochemistry V. 52 4056 2013
PubMed-ID: 23675692  |  Reference-DOI: 10.1021/BI400191Z

(-) Compounds

Molecule 1 - GLUTAREDOXIN NRDH, PUTATIVE
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET21A
    Expression System StrainBL21(DE3)
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneMT3139, NRDH, RV3053C, TBSG_00920
    Organism ScientificMYCOBACTERIUM TUBERCULOSIS
    Organism Taxid83332
    StrainH37RV
    SynonymGLUTAREDOXIN-LIKE ELECTRON TRANSPORTER NRDH, PROBABLE GLUTAREDOXIN ELECTRON TRANSPORT COMPONENT OF NRDEF (GLUTAREDOXIN-LIKE PROTEIN) NRDH

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1NO32Ligand/IonNITRATE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:48 , LEU A:49 , GLN A:50 , SER A:62 , ALA A:79 , HIS A:81 , HOH A:225 , HOH A:236BINDING SITE FOR RESIDUE NO3 A 101
2AC2SOFTWAREARG A:65 , PRO A:66 , ASP A:67 , ARG A:68 , HOH A:256BINDING SITE FOR RESIDUE NO3 A 102

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:11 -A:14

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Ala A:51 -Pro A:52

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4F2I)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4F2I)

(-) Exons   (0, 0)

(no "Exon" information available for 4F2I)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:83
                                                                                                                  
               SCOP domains d4f2ia_ A: automated matches                                                        SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhh....eeee...hhhhhhhhhhhh.....e..........hhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  4f2i A  2 TVTVYTKPACVQCSATSKALDKQGIAYQKVDISLDSEARDYVMALGYLQAPVVAGNDHWSGFRPDRIKALAGAALTAHHHHHH 85
                                    11        21        31        41        51 ||     62        72        82   
                                                                              53|                              
                                                                               55                              

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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4F2I)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4F2I)

(-) Gene Ontology  (5, 10)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

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        I6YB06_MYCTU | I6YB064k8m
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(-) Related Entries Specified in the PDB File

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