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(-) Description

Title :  THE UNLIGANDED STRUCTURE OF C.BESCII CELA GH48 MODULE
 
Authors :  P. M. Alahuhta, V. V. Lunin
Date :  10 Apr 12  (Deposition) - 20 Mar 13  (Release) - 20 Mar 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.45
Chains :  Asym./Biol. Unit :  A
Keywords :  (A/A)6 Barre, Cela, Gh48, Glycoside Hydrolase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  P. M. Alahuhta, V. V. Lunin
Structural And Biochemical Characterization Of C. Bescii Cela
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - GLYCOSIDE HYDROLASE FAMILY 48
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentUNP RESIDUES 1126-1759
    GeneATHE_1867
    Organism ScientificCALDICELLULOSIRUPTOR BESCII
    Organism Taxid521460
    StrainDSM 6725 / Z-1320

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 3)

Asymmetric/Biological Unit (3, 3)
No.NameCountTypeFull Name
1CA1Ligand/IonCALCIUM ION
2EDO1Ligand/Ion1,2-ETHANEDIOL
3SO41Ligand/IonSULFATE ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLU A:182 , GLU A:187 , ASP A:406BINDING SITE FOR RESIDUE CA A 701
2AC2SOFTWARETYR A:394 , TRP A:473 , ASN A:474 , HOH A:835BINDING SITE FOR RESIDUE SO4 A 702
3AC3SOFTWAREASP A:212 , TRP A:313 , LYS A:534BINDING SITE FOR RESIDUE EDO A 703

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4EL8)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Tyr A:118 -Pro A:119
2Asp A:406 -Pro A:407

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4EL8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4EL8)

(-) Exons   (0, 0)

(no "Exon" information available for 4EL8)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:621
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains d4el8a_ A: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh........................eeehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh..................ee....hhhhh.eeee.........hhhhhhhhhh.........eee.................eeee........hhhhh..ee.ee.........hhhhhee......eeeeeehhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..................hhhhh.......eeeeee..eeee...eee.hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhh.........eee.hhhhh.........ee..eeee.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhee.....eeeeeeeeee................eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh.........ee.hhhhhhhhh.........ee.....ee.....hhhhhhhhhhh.hhhhhhhhhhhh...ee...hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4el8 A   7 GEYGQRFMWLWNKIHDPANGYFNQDGIPYHSVETLICEAPDYGHLTTSEAFSYYVWLEAVYGKLTGDWSKFKTAWDTLEKYMIPSAEDQPMSYDPNKPATYAGEWETPDKYPSPLEFNVPVGKDPLHNELVSTYGSTLMYGMHWLMDVDNWYGYGKRGDGVSRASFINTFQRGPEESVWETVPHPSWEEFKWGGPNGFLDLFIKDQNYSKQWRYTDAPDADARAIQATYWAKVWAKEQGKFNEISSYVAKAAKMGDYLRYAMFDKYFKPLGCQDKNAAGGTGYDSAHYLLSWYYAWGGALWSWKIGSSHVHFGYQNPMAAWALANDSDMKPKSPNGASDWAKSLKRQIEFYRWLQSAEGAIAGGATNSWNGRYEKYPAGTATFYGMAYEPNPVYHDPGSNTWFGFQAWSMQRVAEYYYVTGDKDAGALLEKWVSWVKSVVKLNSDGTFAIPSTLDWSGQPDTWNGAYTGNSNLHVKVVDYGTDLGITASLANALLYYSAGTKKYGVFDEGAKNLAKELLDRMWKLYRDEKGLSAPEKRADYKRFFEQEVYIPAGWIGKMPNGDVIKSGVKFIDIRSKYKQDPDWPKLEAAYKSGQAPEFRYHRFWAQCDIAIANATYEILF 631
                                    16        26        36        46        56        66        76        86        96||     107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307|      320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630 
                                                                                                                     97|                                                                                                                                                                                                             307|                                                                                                                                                                                                                                                                                                                                
                                                                                                                      99                                                                                                                                                                                                              311                                                                                                                                                                                                                                                                                                                                

   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4EL8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4EL8)

(-) Gene Ontology  (12, 12)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        B9MKU7_CALBD | B9MKU74l0g 4l6x 4txt

(-) Related Entries Specified in the PDB File

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