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(-) Description

Title :  STRUCTURAL STUDIES OF ROLLING CIRCLE REPLICATION INITIATION PROTEIN FROM STAPHYLOCOCCUS AUREUS
 
Authors :  S. B. Carr, S. E. V. Phillips, C. D. Thomas
Date :  02 Apr 14  (Deposition) - 15 Apr 15  (Release) - 30 Mar 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym./Biol. Unit :  A,C
Keywords :  Isomerase, Antibiotic Resistance, Pcra Helicase, Dna Relaxase, Chimera (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. B. Carr, S. E. Phillips, C. D. Thomas
Structures Of Replication Initiation Proteins From Staphylococcal Antibiotic Resistance Plasmids Reveal Protein Asymmetry And Flexibility Are Necessary For Replication.
Nucleic Acids Res. V. 44 2417 2016
PubMed-ID: 26792891  |  Reference-DOI: 10.1093/NAR/GKV1539

(-) Compounds

Molecule 1 - REPLICATION INITIATION PROTEIN, REPLICATION INITIATION PROTEIN
    Chains: A, C
    EC Number: 5.99.1.2
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET-15M
    Expression System Strain: B834
    Expression System Taxid: 562
    Expression System Variant: PLYSS
    Fragment: REPLICATION INITIATION PROTEIN RESIDUES 32-216, REPLICATION INITIATION PROTEIN RESIDUES 220-314
    Organism Scientific: STAPHYLOCOCCUS AUREUS
    Organism Taxid: 1280
    Synonym: REPD, REPN

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4CWE)

(-) Sites  (0, 0)

(no "Site" information available for 4CWE)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4CWE)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4CWE)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4CWE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4CWE)

(-) Exons   (0, 0)

(no "Exon" information available for 4CWE)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:270
                                                                                                                                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeeeeeee.hhhhhhhhhhhhhhh...eee.....eeeeee....eeeeeehhhhhhhh...eeeee.hhhhhhhhhhhhhhhhhhhheeeeeeeeeeeeee.......eeee.....eeeee.....eeeeee......eeeeeeehhhhhhhh..........eeeeeeee.hhhhhhhhh...eeee..hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4cwe A  39 PQPELSFDAMTIVGNLNKTNAKKLSDFMSTEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRVEFNPNKLTHEEMLWLKQNIIDYMEDDGFTRLDLAFDFEDDLSDYYAMTDKAVKKTIFYGRNGKPETKYFGVRDSDRFIRIYNKKQERKDNADVEVMSEHLWRVEIELKRDMVDYWNDCFNDLHILQPDWKTIERTSDRAMVFMLLNDEEEWGKLERRTKNKYKKLIKEISLIDLTDLMKSTLKANEKQLQKQIDFWQR 308
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308


Chain C from PDB  Type:PROTEIN  Length:270
                                                                                                                                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeeeeeee.hhhhhhhhhhhhhhh...eee.....eeeeee....eeeeeehhhhhhh....eeeee.hhhhhhhhhhhhhhhhhhhheeeeeeeeeeeeee.......eee......eeeee.....eeeeee......eeeeeeehhhhhhhh..........eeeeeeee.hhhhhh.......eeee.hhhhh.hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh..eehhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4cwe C  39 PQPELSFDAMTIVGNLNKTNAKKLSDFMSTEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRVEFNPNKLTHEEMLWLKQNIIDYMEDDGFTRLDLAFDFEDDLSDYYAMTDKAVKKTIFYGRNGKPETKYFGVRDSDRFIRIYNKKQERKDNADVEVMSEHLWRVEIELKRDMVDYWNDCFNDLHILQPDWKTIERTSDRAMVFMLLNDEEEWGKLERRTKNKYKKLIKEISLIDLTDLMKSTLKANEKQLQKQIDFWQR 308
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4CWE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4CWE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4CWE)

(-) Gene Ontology  (4, 8)

Asymmetric/Biological Unit(hide GO term definitions)

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  REPN_STAAU | P19529
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        REPD_STAAU | P03065: 4cwc

(-) Related Entries Specified in the PDB File

4cwc STRUCTURE OF ROLLING CIRCLE REPLICATION INITIATOR PROTEIN (REPDE) FROM STAPHYLOCOCCUS AUREUS