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(-) Description

Title :  REVERSIBLE BENDING AND HELIX GEOMETRY IN A B-DNA DODECAMER: CGCGAATTBRCGCG
 
Authors :  M. L. Kopka, A. V. Fratini, R. E. Dickerson
Date :  16 Feb 82  (Deposition) - 15 Apr 82  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A,B
Keywords :  B-Dna, Double Helix, Modified (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. V. Fratini, M. L. Kopka, H. R. Drew, R. E. Dickerson
Reversible Bending And Helix Geometry In A B-Dna Dodecamer: Cgcgaattbrcgcg.
J. Biol. Chem. V. 257 14686 1982
PubMed-ID: 7174662
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(CBR) P*GP*CP*G)-3')
    ChainsA, B
    EngineeredYES
    SyntheticYES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1CBR2Mod. Nucleotide5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:DNA  Length:12
                                           
                  4bna A  1 CGCGAATTcGCG 12
                                    10  
                                    9-CBR

Chain B from PDB  Type:DNA  Length:12
                                           
                  4bna B 13 CGCGAATTcGCG 24
                                    22  
                                   21-CBR

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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