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Summary Information (see also Sequences/Alignments below) |
Asymmetric Unit (3, 25)
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Asymmetric Unit (12, 12)
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(no "SS Bond" information available for 4B9K) |
Asymmetric Unit
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Asymmetric Unit (1, 4)
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Asymmetric Unit (5, 20)
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Asymmetric UnitChain A from PDB Type:PROTEIN Length:103 aligned with ELOB_HUMAN | Q15370 from UniProtKB/Swiss-Prot Length:118 Alignment length:104 10 20 30 40 50 60 70 80 90 100 ELOB_HUMAN 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMK 104 SCOP domains d4b9ka_ A: Elongin B SCOP domains CATH domains -------------------------------------------------------------------------------------------------------- CATH domains Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE UBIQUITIN_2 PDB: A:1-66 UniProt: 1-66 -------------------------------------- PROSITE Transcript -------------------------------------------------------------------------------------------------------- Transcript 4b9k A 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEcGFTSQTARPQAPATVGLAFRA-DTFEALcIEPFSSPPELPDVMK 104 10 20 30 40 50 60 70 80| | 90 100 60-CAS 81 | | 83 | 89-CAS Chain B from PDB Type:PROTEIN Length:88 aligned with ELOC_HUMAN | Q15369 from UniProtKB/Swiss-Prot Length:112 Alignment length:97 25 35 45 55 65 75 85 95 105 ELOC_HUMAN 16 AMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 SCOP domains d4b9kb_ B: Elongin C SCOP domains CATH domains ------------------------------------------------------------------------------------------------- CATH domains Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------- PROSITE Transcript 2 (1) ----------------------------------Exon 2.10d PDB: B:57-112 UniProt: 50-112 [INCOMPLETE] Transcript 2 (1) Transcript 2 (2) Exon 2.7 PDB: B:16-47 [INCOMPLETE]-------------------------------------------------------------- Transcript 2 (2) 4b9k B 16 MMYVKLISSDGHEFIVKREHALTSGTIKAMLS---------TNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 25 35 45 | - | 65 75 85 95 105 47 57 Chain C from PDB Type:PROTEIN Length:138 aligned with VHL_HUMAN | P40337 from UniProtKB/Swiss-Prot Length:213 Alignment length:141 71 81 91 101 111 121 131 141 151 161 171 181 191 201 VHL_HUMAN 62 VLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLT 202 SCOP domains d4b9kc_ C: automated matches SCOP domains CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) (1) -PPA--W-K---G-I-HPISP-L-A-RH-L-C--P-H--G--APDG--YCH-CQVCPL-GI---Y-F-LK---FC--------H-T-T----LGCIPE-GFPH-DG--D----DW-P-V---P-K-P--DS-----Q-W-- SAPs(SNPs) (1) SAPs(SNPs) (2) ---L----------L-S-N-----H-SP---D-------R-----P---NN-RR--RS-----------T----S------------------MD-V--PR-R-FQ--F-------Q-----R---Q---------R---- SAPs(SNPs) (2) SAPs(SNPs) (3) ---W----------S-T-R-----L------S-----------------R--SY--------------------Y-------------------N----QW----W--G-----------------V-------------- SAPs(SNPs) (3) SAPs(SNPs) (4) ------------------------R---------------------------------------------------------------------------Y---------------------------------------- SAPs(SNPs) (4) SAPs(SNPs) (5) ------------------------S-------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (5) PROSITE --------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript 1 (1) Exon 1.1a PDB: C:62-114 UniProt: 1-114 [INCOMPLETE] ----------------------------------------Exon 1.6d PDB: C:155-202 UniProt: 155-213 Transcript 1 (1) Transcript 1 (2) ----------------------------------------------------Exon 1.4 PDB: C:114-155 (gaps) ----------------------------------------------- Transcript 1 (2) 4b9k C 62 VLRSVNSREPSQVIFcNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLN---QPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLT 202 71 | 81 91 101 111 121 131 141 | 151 161 171 181 191 201 77-CAS 141 145 Chain D from PDB Type:PROTEIN Length:101 aligned with ELOB_HUMAN | Q15370 from UniProtKB/Swiss-Prot Length:118 Alignment length:103 10 20 30 40 50 60 70 80 90 100 ELOB_HUMAN 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVM 103 SCOP domains d4b9kd_ D: Elongin B SCOP domains CATH domains ------------------------------------------------------------------------------------------------------- CATH domains Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE UBIQUITIN_2 PDB: D:1-66 UniProt: 1-66 ------------------------------------- PROSITE Transcript ------------------------------------------------------------------------------------------------------- Transcript 4b9k D 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEcGFTSQTARPQAPATVGLAFR--DTFEALcIEPFSSPPELPDVM 103 10 20 30 40 50 60 70 80 | 90 100 60-CAS 80 83 | 89-CAS Chain E from PDB Type:PROTEIN Length:87 aligned with ELOC_HUMAN | Q15369 from UniProtKB/Swiss-Prot Length:112 Alignment length:96 26 36 46 56 66 76 86 96 106 ELOC_HUMAN 17 MYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 SCOP domains d4b9ke_ E: Elongin C SCOP domains CATH domains ------------------------------------------------------------------------------------------------ CATH domains Pfam domains ------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------ PROSITE Transcript 2 (1) ---------------------------------Exon 2.10d PDB: E:57-112 UniProt: 50-112 [INCOMPLETE] Transcript 2 (1) Transcript 2 (2) Exon 2.7 PDB: E:17-47 -------------------------------------------------------------- Transcript 2 (2) 4b9k E 17 MYVKLISSDGHEFIVKREHALTSGTIKAMLS---------TNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDc 112 26 36 46| -| 66 76 86 96 106 | 47 57 112-CAS Chain F from PDB Type:PROTEIN Length:143 aligned with VHL_HUMAN | P40337 from UniProtKB/Swiss-Prot Length:213 Alignment length:143 71 81 91 101 111 121 131 141 151 161 171 181 191 201 VHL_HUMAN 62 VLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQE 204 SCOP domains d4b9kf_ F: automated matches SCOP domains CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) (1) -PPA--W-K---G-I-HPISP-L-A-RH-L-C--P-H--G--APDG--YCH-CQVCPL-GI---Y-F-LK---FC------E-H-T-T----LGCIPE-GFPH-DG--D----DW-P-V---P-K-P--DS-----Q-W---- SAPs(SNPs) (1) SAPs(SNPs) (2) ---L----------L-S-N-----H-SP---D-------R-----P---NN-RR--RS-----------T----S------------------MD-V--PR-R-FQ--F-------Q-----R---Q---------R------ SAPs(SNPs) (2) SAPs(SNPs) (3) ---W----------S-T-R-----L------S-----------------R--SY--------------------Y-------------------N----QW----W--G-----------------V---------------- SAPs(SNPs) (3) SAPs(SNPs) (4) ------------------------R---------------------------------------------------------------------------Y------------------------------------------ SAPs(SNPs) (4) SAPs(SNPs) (5) ------------------------S---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (5) PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript 1 (1) Exon 1.1a PDB: F:62-114 UniProt: 1-114 [INCOMPLETE] ----------------------------------------Exon 1.6d PDB: F:155-204 UniProt: 155-213 Transcript 1 (1) Transcript 1 (2) ----------------------------------------------------Exon 1.4 PDB: F:114-155 UniProt: 114-155 ------------------------------------------------- Transcript 1 (2) 4b9k F 62 VLRSVNSREPSQVIFcNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQE 204 71 | 81 91 101 111 121 131 141 151 161 171 181 191 201 77-CAS Chain G from PDB Type:PROTEIN Length:103 aligned with ELOB_HUMAN | Q15370 from UniProtKB/Swiss-Prot Length:118 Alignment length:103 10 20 30 40 50 60 70 80 90 100 ELOB_HUMAN 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVM 103 SCOP domains d4b9kg_ G: Elongin B SCOP domains CATH domains ------------------------------------------------------------------------------------------------------- CATH domains Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE UBIQUITIN_2 PDB: G:1-66 UniProt: 1-66 ------------------------------------- PROSITE Transcript ------------------------------------------------------------------------------------------------------- Transcript 4b9k G 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEcGFTSQTARPQAPATVGLAFRADDTFEALcIEPFSSPPELPDVM 103 10 20 30 40 50 60 70 80 90 100 60-CAS 89-CAS Chain H from PDB Type:PROTEIN Length:89 aligned with ELOC_HUMAN | Q15369 from UniProtKB/Swiss-Prot Length:112 Alignment length:96 26 36 46 56 66 76 86 96 106 ELOC_HUMAN 17 MYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 SCOP domains d4b9kh_ H: Elongin C SCOP domains CATH domains ------------------------------------------------------------------------------------------------ CATH domains Pfam domains ------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------ PROSITE Transcript 2 (1) ---------------------------------Exon 2.10d PDB: H:56-112 UniProt: 50-112 [INCOMPLETE] Transcript 2 (1) Transcript 2 (2) Exon 2.7 PDB: H:17-48 -------------------------------------------------------------- Transcript 2 (2) 4b9k H 17 MYVKLISSDGHEFIVKREHALTSGTIKAMLSG-------ETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 26 36 46 | 56 66 76 86 96 106 48 56 Chain I from PDB Type:PROTEIN Length:147 aligned with VHL_HUMAN | P40337 from UniProtKB/Swiss-Prot Length:213 Alignment length:147 71 81 91 101 111 121 131 141 151 161 171 181 191 201 VHL_HUMAN 62 VLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAH 208 SCOP domains d4b9ki_ I: automated matches SCOP domains CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) (1) -PPA--W-K---G-I-HPISP-L-A-RH-L-C--P-H--G--APDG--YCH-CQVCPL-GI---Y-F-LK---FC------E-H-T-T----LGCIPE-GFPH-DG--D----DW-P-V---P-K-P--DS-----Q-W-------- SAPs(SNPs) (1) SAPs(SNPs) (2) ---L----------L-S-N-----H-SP---D-------R-----P---NN-RR--RS-----------T----S------------------MD-V--PR-R-FQ--F-------Q-----R---Q---------R---------- SAPs(SNPs) (2) SAPs(SNPs) (3) ---W----------S-T-R-----L------S-----------------R--SY--------------------Y-------------------N----QW----W--G-----------------V-------------------- SAPs(SNPs) (3) SAPs(SNPs) (4) ------------------------R---------------------------------------------------------------------------Y---------------------------------------------- SAPs(SNPs) (4) SAPs(SNPs) (5) ------------------------S-------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (5) PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript 1 (1) Exon 1.1a PDB: I:62-114 UniProt: 1-114 [INCOMPLETE] ----------------------------------------Exon 1.6d PDB: I:155-208 UniProt: 155-213 Transcript 1 (1) Transcript 1 (2) ----------------------------------------------------Exon 1.4 PDB: I:114-155 UniProt: 114-155 ----------------------------------------------------- Transcript 1 (2) 4b9k I 62 VLRSVNSREPSQVIFcNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAH 208 71 | 81 91 101 111 121 131 141 151 161 171 181 191 201 77-CAS Chain J from PDB Type:PROTEIN Length:103 aligned with ELOB_HUMAN | Q15370 from UniProtKB/Swiss-Prot Length:118 Alignment length:103 10 20 30 40 50 60 70 80 90 100 ELOB_HUMAN 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVM 103 SCOP domains d4b9kj_ J: Elongin B SCOP domains CATH domains ------------------------------------------------------------------------------------------------------- CATH domains Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE UBIQUITIN_2 PDB: J:1-66 UniProt: 1-66 ------------------------------------- PROSITE Transcript ------------------------------------------------------------------------------------------------------- Transcript 4b9k J 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEcGFTSQTARPQAPATVGLAFRADDTFEALcIEPFSSPPELPDVM 103 10 20 30 40 50 60 70 80 90 100 60-CAS 89-CAS Chain K from PDB Type:PROTEIN Length:91 aligned with ELOC_HUMAN | Q15369 from UniProtKB/Swiss-Prot Length:112 Alignment length:97 25 35 45 55 65 75 85 95 105 ELOC_HUMAN 16 AMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 SCOP domains d4b9kk_ K: Elongin C SCOP domains CATH domains ------------------------------------------------------------------------------------------------- CATH domains Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------- PROSITE Transcript 2 (1) ----------------------------------Exon 2.10d PDB: K:56-112 UniProt: 50-112 [INCOMPLETE] Transcript 2 (1) Transcript 2 (2) Exon 2.7 PDB: K:16-49 [INCOMPLETE]-------------------------------------------------------------- Transcript 2 (2) 4b9k K 16 MMYVKLISSDGHEFIVKREHALTSGTIKAMLSGP------ETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 25 35 45 | -| 65 75 85 95 105 49 56 Chain L from PDB Type:PROTEIN Length:146 aligned with VHL_HUMAN | P40337 from UniProtKB/Swiss-Prot Length:213 Alignment length:146 71 81 91 101 111 121 131 141 151 161 171 181 191 201 VHL_HUMAN 62 VLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIA 207 SCOP domains d4b9kl_ L: automated matches SCOP domains CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) (1) -PPA--W-K---G-I-HPISP-L-A-RH-L-C--P-H--G--APDG--YCH-CQVCPL-GI---Y-F-LK---FC------E-H-T-T----LGCIPE-GFPH-DG--D----DW-P-V---P-K-P--DS-----Q-W------- SAPs(SNPs) (1) SAPs(SNPs) (2) ---L----------L-S-N-----H-SP---D-------R-----P---NN-RR--RS-----------T----S------------------MD-V--PR-R-FQ--F-------Q-----R---Q---------R--------- SAPs(SNPs) (2) SAPs(SNPs) (3) ---W----------S-T-R-----L------S-----------------R--SY--------------------Y-------------------N----QW----W--G-----------------V------------------- SAPs(SNPs) (3) SAPs(SNPs) (4) ------------------------R---------------------------------------------------------------------------Y--------------------------------------------- SAPs(SNPs) (4) SAPs(SNPs) (5) ------------------------S------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (5) PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript 1 (1) Exon 1.1a PDB: L:62-114 UniProt: 1-114 [INCOMPLETE] ----------------------------------------Exon 1.6d PDB: L:155-207 UniProt: 155-213 Transcript 1 (1) Transcript 1 (2) ----------------------------------------------------Exon 1.4 PDB: L:114-155 UniProt: 114-155 ---------------------------------------------------- Transcript 1 (2) 4b9k L 62 VLRSVNSREPSQVIFcNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIA 207 71 | 81 91 101 111 121 131 141 151 161 171 181 191 201 77-CAS
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Asymmetric Unit
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