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(-) Description

Title :  LEOA BACTERIAL DYNAMIN GTPASE FROM ETEC
 
Authors :  K. A. Michie, H. H. Low, J. Lowe
Date :  21 May 12  (Deposition) - 28 Aug 13  (Release) - 22 Oct 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym./Biol. Unit :  A
Keywords :  Hydrolase, Lt Toxin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. A. Michie, A. Boysen, H. H. Low, J. Moller-Jensen, J. Lowe
Leoa, B And C From Enterotoxigenic Escherichia Coli (Etec) Are Bacterial Dynamins.
Plos One V. 9 07211 2014
PubMed-ID: 25203511  |  Reference-DOI: 10.1371/JOURNAL.PONE.0107211

(-) Compounds

Molecule 1 - LEOA
    Atcc: 35401
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: C41
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 316401
    Strain: ETEC H10407

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 18)

Asymmetric/Biological Unit (2, 18)
No.NameCountTypeFull Name
1MSE17Mod. Amino AcidSELENOMETHIONINE
2SO41Ligand/IonSULFATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:416 , LYS A:423 , GLY A:424 , LYS A:427 , ARG A:553 , HOH A:2048BINDING SITE FOR RESIDUE SO4 A1572

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4AUR)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4AUR)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4AUR)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4AUR)

(-) Exons   (0, 0)

(no "Exon" information available for 4AUR)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:564
 aligned with E3PN25_ECOH1 | E3PN25 from UniProtKB/TrEMBL  Length:577

    Alignment length:571
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570 
         E3PN25_ECOH1     1 MEQFKQFSIEKQAAINSLLQLRGMLEMLGEMGINISDDLQKVTSAINAIESDVLRIALLGAFSDGKTSVIAAWLGKVMDDMNISMDESSDRLSIYKPEGLPDQCEIVDTPGLFGDKEREVDGRLVMYEDLTRRYISEAHLIFYVVDATNPLKESHSDIVKWVLRDLNKLSSTIFVINKMDEVTSLTDQALFDEQAAIKKANLKGKLQRAADLTAQECEQLNIVCVASNPNGRGLTYWFTKPEHYESRSRINDLKNAATEILKTNVPEVLLVKTGMDVVKDIVIQRVTLASRHLDELNTFVEKNDEDMHRFSNDIKQSRIEVKRLAGELFEELNLMEKQLMSQLRPLDLDDIRPFMDDELGYTEDGVGFKLHLRIKQSVDRFFEQSTAVSQRLSDDITRQLSSSESFLSGLGEGAFRSLGGAFKGVSKISPATLKTTILAARDTIGKLTGYVYKFKPWEATKLAGSIAKWAGPVGAAFTIGSDLWDAYKAHEREQELKEVKASLAKIIKEPFEDIYDVLSSDEKMFAFFAPQIQQMEQVVTELAEKSQAIRDNRQKLSLIQTQLAQLMVPAT 571
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.eeeeeee.hhhhhhhhhhhhhh.................eee........eeeeehhhhh-------...hhhhhhhhhhhhhh..eeeeeee.....hhhhhhhhhhhhh...hhh.eeeeee.hhhhh...hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhheeee........hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhh.....hhhhhhhhhhhhhhhhhhhh..............hhhhhh...........hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4aur A   1 mEQFKQFSIEKQAAINSLLQLRGmLEmLGEmGINISDDLQKVTSAINAIESDVLRIALLGAFSDGKTSVIAAWLGKVmDDmNISmDESSDRLSIYKPEGLPDQCEIVDTPGLF-------DGRLVmYEDLTRRYISEAHLIFYVVDATNPLKESHSDIVKWVLRDLNKLSSTIFVINKmDEVTSLTDQALFDEQAAIKKANLKGKLQRAADLTAQECEQLNIVCVASNPNGRGLTYWFTKPEHYESRSRINDLKNAATEILKTNVPEVLLVKTGmDVVKDIVIQRVTLASRHLDELNTFVEKNDEDmHRFSNDIKQSRIEVKRLAGELFEELNLmEKQLmSQLRPLDLDDIRPFmDDELGYTEDGVGFKLHLRIKQSVDRFFEQSTAVSQRLSDDITRQLSSSESFLSGLGEGAFRSLGGAFKGVSKISPATLKTTILAARDTIGKLTGYVYKFKPWEATKLAGSIAKWAGPVGAAFTIGSDLWDAYKAHEREQELKEVKASLAKIIKEPFEDIYDVLSSDEKmFAFFAPQIQQmEQVVTELAEKSQAIRDNRQKLSLIQTQLAQLmVPAT 571
                            |       10        20   |  | 30|       40        50        60        70       |80|   |   90       100       110  |      -|    | 130       140       150       160       170       180       190       200       210       220       230       240       250       260       270    |  280       290       300      |310       320       330    |  340       350    |  360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520   |   530    |  540       550       560      |570 
                            |                     24-MSE  |                                             78-MSE  |                         113     121    |                                                  179-MSE                                                                                         275-MSE                         307-MSE                     335-MSE|            355-MSE                                                                                                                                                                  524-MSE    535-MSE                         567-MSE
                            1-MSE                    27-MSE                                                81-MSE                                      126-MSE                                                                                                                                                                                                               340-MSE                                                                                                                                                                                                                                   
                                                         31-MSE                                                85-MSE
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4AUR)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4AUR)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4AUR)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (E3PN25_ECOH1 | E3PN25)
molecular function
    GO:0005525    GTP binding    Interacting selectively and non-covalently with GTP, guanosine triphosphate.

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 Related Entries

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