Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)

(-) Description

Title :  STRUCTURE OF HUMAN INOSITOL MONOPHOSPHATASE 1
 
Authors :  N. Singh, M. Knight, A. C. Halliday, N. A. Lack, E. D. Lowe, G. C. Churchil
Date :  27 Apr 12  (Deposition) - 10 Oct 12  (Release) - 17 Oct 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (1x)
Keywords :  Hydrolase, Lithium, Bipolar Disorder (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  N. Singh, A. C. Halliday, M. Knight, N. A. Lack, E. D. Lowe, G. C. Churchill
Cloning, Expression, Purification, Crystallization And X- Ray Analysis Of Inositol Monophosphatase From Mus Musculus And Homo Sapiens.
Acta Crystallogr. , Sect. F V. 68 1149 2012
PubMed-ID: 23027737  |  Reference-DOI: 10.1107/S1744309112035191

(-) Compounds

Molecule 1 - INOSITOL MONOPHOSPHATASE 1
    ChainsA, B
    EC Number3.1.3.25
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPRSET5A
    Expression System StrainBLR(DE3)
    Expression System Taxid469008
    Expression System VariantPLYSS
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    Other DetailsPARTIALLY OCCUPIED DISULPHIDE BOND BETWEEN A24 AND A125 AND BETWEEN B24 AND B125
    SynonymIMP 1, IMPASE 1, INOSITOL-1(OR 4)-MONOPHOSPHATASE 1, LITHIUM-SENSITIVE MYO-INOSITOL MONOPHOSPHATASE A1

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit AB
Biological Unit 1 (1x)AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 15)

Asymmetric Unit (3, 15)
No.NameCountTypeFull Name
1GOL7Ligand/IonGLYCEROL
2MG6Ligand/IonMAGNESIUM ION
3PO42Ligand/IonPHOSPHATE ION
Biological Unit 1 (2, 9)
No.NameCountTypeFull Name
1GOL7Ligand/IonGLYCEROL
2MG-1Ligand/IonMAGNESIUM ION
3PO42Ligand/IonPHOSPHATE ION

(-) Sites  (15, 15)

Asymmetric Unit (15, 15)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:70 , ASP A:90 , ILE A:92 , ASP A:93 , GLY A:94 , THR A:95 , MG A:501 , MG A:502 , MG A:503 , GOL A:1277 , HOH A:2086 , HOH A:2091 , HOH A:2126 , HOH A:2145 , HOH A:2292BINDING SITE FOR RESIDUE PO4 A 401
02AC2SOFTWAREGLU A:70 , ASP A:90 , ILE A:92 , PO4 A:401 , MG A:502 , HOH A:2091BINDING SITE FOR RESIDUE MG A 501
03AC3SOFTWAREASP A:90 , ASP A:93 , ASP A:220 , PO4 A:401 , MG A:501 , GOL A:1277 , HOH A:2126BINDING SITE FOR RESIDUE MG A 502
04AC4SOFTWAREGLU A:70 , PO4 A:401 , HOH A:2068 , HOH A:2069 , HOH A:2086BINDING SITE FOR RESIDUE MG A 503
05AC5SOFTWAREGLU B:70 , ASP B:90 , ILE B:92 , ASP B:93 , GLY B:94 , THR B:95 , MG B:501 , MG B:502 , MG B:503 , GOL B:1277 , HOH B:2073 , HOH B:2080 , HOH B:2121 , HOH B:2152 , HOH B:2296BINDING SITE FOR RESIDUE PO4 B 401
06AC6SOFTWAREGLU B:70 , ASP B:90 , ILE B:92 , PO4 B:401 , MG B:502 , HOH B:2080BINDING SITE FOR RESIDUE MG B 501
07AC7SOFTWAREASP B:90 , ASP B:93 , ASP B:220 , PO4 B:401 , MG B:501 , GOL B:1277 , HOH B:2121BINDING SITE FOR RESIDUE MG B 502
08AC8SOFTWAREGLU B:70 , PO4 B:401 , HOH B:2064 , HOH B:2065 , HOH B:2073BINDING SITE FOR RESIDUE MG B 503
09AC9SOFTWAREASP A:93 , THR A:195 , ALA A:196 , GLU A:213 , ASP A:220 , PO4 A:401 , MG A:502 , HOH A:2126 , HOH A:2257BINDING SITE FOR RESIDUE GOL A1277
10BC1SOFTWAREASP B:93 , THR B:195 , ALA B:196 , GLU B:213 , ASP B:220 , PO4 B:401 , MG B:502 , HOH B:2121 , HOH B:2223 , HOH B:2224 , HOH B:2245BINDING SITE FOR RESIDUE GOL B1277
11BC2SOFTWARELEU A:163 , ILE A:190 , SER A:192 , LEU B:163 , MET B:179 , ILE B:190 , SER B:192BINDING SITE FOR RESIDUE GOL A1278
12BC3SOFTWAREALA A:26 , ASN A:29 , GLU A:30 , MET A:31 , THR A:46BINDING SITE FOR RESIDUE GOL A1279
13BC4SOFTWAREILE A:185 , ARG A:261 , GLU A:265 , HOH A:2232 , HOH A:3002BINDING SITE FOR RESIDUE GOL A1280
14BC5SOFTWAREILE B:117 , PHE B:243 , ASP B:244 , LEU B:245 , HOH B:2164 , HOH B:3003 , HOH B:3005BINDING SITE FOR RESIDUE GOL B1278
15BC6SOFTWAREASP B:10 , THR B:132BINDING SITE FOR RESIDUE GOL B1279

(-) SS Bonds  (2, 2)

Asymmetric Unit
No.Residues
1A:24 -A:125
2B:24 -B:125

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Ile A:185 -Pro A:186
2Ile B:185 -Pro B:186

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (1, 2)

Asymmetric Unit (1, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_049600I109VIMPA1_HUMANPolymorphism204781A/BI109V

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (1, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_049600I109VIMPA1_HUMANPolymorphism204781A/BI109V

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (2, 4)

Asymmetric Unit (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1IMP_1PS00629 Inositol monophosphatase family signature 1.IMPA1_HUMAN87-100
 
  2A:87-100
B:87-100
2IMP_2PS00630 Inositol monophosphatase family signature 2.IMPA1_HUMAN219-233
 
  2A:219-233
B:219-233
Biological Unit 1 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1IMP_1PS00629 Inositol monophosphatase family signature 1.IMPA1_HUMAN87-100
 
  2A:87-100
B:87-100
2IMP_2PS00630 Inositol monophosphatase family signature 2.IMPA1_HUMAN219-233
 
  2A:219-233
B:219-233

(-) Exons   (8, 16)

Asymmetric Unit (8, 16)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1aENST000002561081aENSE00002126032chr8:82598928-82598487442IMPA1_HUMAN-00--
1.3aENST000002561083aENSE00002163677chr8:82593819-8259373387IMPA1_HUMAN1-21212A:3-21
B:3-21
19
19
1.4aENST000002561084aENSE00000909941chr8:82593018-82592885134IMPA1_HUMAN22-66452A:22-66
B:22-66
45
45
1.5ENST000002561085ENSE00000909940chr8:82591465-82591361105IMPA1_HUMAN66-101362A:66-101
B:66-101
36
36
1.7aENST000002561087aENSE00000909939chr8:82588514-8258846946IMPA1_HUMAN101-116162A:101-116
B:101-116
16
16
1.9dENST000002561089dENSE00002145495chr8:82586184-82586076109IMPA1_HUMAN117-153372A:117-153
B:117-153
37
37
1.10dENST0000025610810dENSE00002149892chr8:82583282-82583174109IMPA1_HUMAN153-189372A:153-189
B:153-189
37
37
1.11bENST0000025610811bENSE00001682001chr8:82572902-82572751152IMPA1_HUMAN189-240522A:189-240
B:189-240
52
52
1.12cENST0000025610812cENSE00001747149chr8:82571701-825701961506IMPA1_HUMAN240-277382A:240-276
B:240-276
37
37

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:274
 aligned with IMPA1_HUMAN | P29218 from UniProtKB/Swiss-Prot  Length:277

    Alignment length:274
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272    
          IMPA1_HUMAN     3 DPWQECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDLVTATDQKVEKMLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVATGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAKEIQVIPLQRDDE 276
               SCOP domains d4as4a_ A: Inositol monophosphatase                                                                                                                                                                                                                                                SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhh......ee......eehhhhhhhhhhhhhhhhhhh...eeeehhhhhh..........eeeeeeeehhhhhhhh....eeeeeeee..eeeeeeeee....eeeeee...eeee..ee.......hhhh.eee.......hhhhhhhhhhhhhhhhh....eee...hhhhhhhhhhh....eeeee..hhhhhhhhhhhhhhh..eee............eeeee.hhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------V----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------IMP_1         ----------------------------------------------------------------------------------------------------------------------IMP_2          ------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3a          Exon 1.4a  PDB: A:22-66 UniProt: 22-66       ----------------------------------Exon 1.7a       ------------------------------------Exon 1.10d  PDB: A:153-189           --------------------------------------------------Exon 1.12c  PDB: A:240-276            Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------Exon 1.5  PDB: A:66-101             ---------------Exon 1.9d  PDB: A:117-153            -----------------------------------Exon 1.11b  PDB: A:189-240 UniProt: 189-240         ------------------------------------ Transcript 1 (2)
                 4as4 A   3 DPWQECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDLVTATDQKVEKMLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVATGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAKEIQVIPLQRDDE 276
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272    

Chain B from PDB  Type:PROTEIN  Length:274
 aligned with IMPA1_HUMAN | P29218 from UniProtKB/Swiss-Prot  Length:277

    Alignment length:274
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272    
          IMPA1_HUMAN     3 DPWQECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDLVTATDQKVEKMLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVATGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAKEIQVIPLQRDDE 276
               SCOP domains d4as4b_ B: Inositol monophosphatase                                                                                                                                                                                                                                                SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhh......ee......eehhhhhhhhhhhhhhhhhhh...eeeehhhhhh..........eeeeeeeehhhhhhhh....eeeeeeee..eeeeeeeee....eeeeee...eeee..ee.......hhhh.eee.......hhhhhhhhhhhhhhhhh....eee...hhhhhhhhhhh....eeeee..hhhhhhhhhhhhhhh..eee............eeeee.hhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------V----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------IMP_1         ----------------------------------------------------------------------------------------------------------------------IMP_2          ------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3a          Exon 1.4a  PDB: B:22-66 UniProt: 22-66       ----------------------------------Exon 1.7a       ------------------------------------Exon 1.10d  PDB: B:153-189           --------------------------------------------------Exon 1.12c  PDB: B:240-276            Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------Exon 1.5  PDB: B:66-101             ---------------Exon 1.9d  PDB: B:117-153            -----------------------------------Exon 1.11b  PDB: B:189-240 UniProt: 189-240         ------------------------------------ Transcript 1 (2)
                 4as4 B   3 DPWQECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDLVTATDQKVEKMLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAAVNMCLVATGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAKEIQVIPLQRDDE 276
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272    

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4AS4)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4AS4)

(-) Gene Ontology  (23, 23)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (IMPA1_HUMAN | P29218)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0008934    inositol monophosphate 1-phosphatase activity    Catalysis of the reaction: myo-inositol 1-phosphate + H2O = myo-inositol + phosphate.
    GO:0052832    inositol monophosphate 3-phosphatase activity    Catalysis of the reaction: myo-inositol 3-phosphate + H2O = myo-inositol + phosphate.
    GO:0052833    inositol monophosphate 4-phosphatase activity    Catalysis of the reaction: myo-inositol 4-phosphate + H2O = myo-inositol + phosphate.
    GO:0052834    inositol monophosphate phosphatase activity    Catalysis of the reaction: myo-inositol phosphate + H2O = myo-inositol + phosphate.
    GO:0031403    lithium ion binding    Interacting selectively and non-covalently with lithium ions (Li+).
    GO:0000287    magnesium ion binding    Interacting selectively and non-covalently with magnesium (Mg) ions.
    GO:0030145    manganese ion binding    Interacting selectively and non-covalently with manganese (Mn) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0042803    protein homodimerization activity    Interacting selectively and non-covalently with an identical protein to form a homodimer.
biological process
    GO:0006021    inositol biosynthetic process    The chemical reactions and pathways resulting in the formation of inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms.
    GO:0006020    inositol metabolic process    The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms.
    GO:0046855    inositol phosphate dephosphorylation    The process of removing a phosphate group from any mono- or polyphosphorylated inositol.
    GO:0043647    inositol phosphate metabolic process    The chemical reactions and pathways involving inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.
    GO:0006796    phosphate-containing compound metabolic process    The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid.
    GO:0006661    phosphatidylinositol biosynthetic process    The chemical reactions and pathways resulting in the formation of phosphatidylinositol, any glycophospholipid in which the sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.
    GO:0046854    phosphatidylinositol phosphorylation    The process of introducing one or more phosphate groups into a phosphatidylinositol, any glycerophosphoinositol having one phosphatidyl group esterified to one of the hydroxy groups of inositol.
    GO:0007165    signal transduction    The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    GOL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    PO4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Ile A:185 - Pro A:186   [ RasMol ]  
    Ile B:185 - Pro B:186   [ RasMol ]  
 
Biological Unit
  Complete Structure
    Biological Unit 1  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  4as4
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  IMPA1_HUMAN | P29218
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  3.1.3.25
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  IMPA1_HUMAN | P29218
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        IMPA1_HUMAN | P292181awb 1ima 1imb 1imc 1imd 1ime 1imf 2hhm

(-) Related Entries Specified in the PDB File

1awb HUMAN MYO-INOSITOL MONOPHOSPHATASE IN COMPLEX WITH D- INOSITOL-1-PHOSPHATE AND CALCIUM
1ima INOSITOL MONOPHOSPHATASE COMPLEXED WITH GADOLINIUM AND D- MYO-INOSITOL-1-PHOSPHATE
1imb INOSITOL MONOPHOSPHATASE COMPLEXED WITH GADOLINIUM AND L- MYO-INOSITOL-1-PHOSPHATE
1imc INOSITOL MONOPHOSPHATASE COMPLEXED WITH MANGANESE (II) AND CHLORIDE
1imd INOSITOL MONOPHOSPHATASE COMPLEXED WITH MANGANESE (II) AND PHOSPHATE
1ime INOSITOL MONOPHOSPHATASE COMPLEXED WITH CALCIUM
1imf INOSITOL MONOPHOSPHATASE (APOENZYME)
2hhm HUMAN INOSITOL MONOPHOSPHATASE DIMER COMPLEX WITH GADOLINIUM AND SULFATE
4as5 STRUCTURE OF HUMAN INOSITOL MONOPHOSPHATASE 1