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(-) Description

Title :  STRUCTURE OF ULK1 BOUND TO AN INHIBITOR
 
Authors :  M. B. Lazarus, C. J. Novotny, K. M. Shokat
Date :  14 Oct 14  (Deposition) - 14 Jan 15  (Release) - 28 Jan 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.56
Chains :  Asym./Biol. Unit :  A
Keywords :  Kinase, Autophagy, Inhibitor, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. B. Lazarus, C. J. Novotny, K. M. Shokat
Structure Of The Human Autophagy Initiating Kinase Ulk1 In Complex With Potent Inhibitors.
Acs Chem. Biol. V. 10 257 2015
PubMed-ID: 25551253  |  Reference-DOI: 10.1021/CB500835Z

(-) Compounds

Molecule 1 - SERINE/THREONINE-PROTEIN KINASE ULK1
    ChainsA
    EC Number2.7.11.1
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentUNP RESIDUES 1-283
    GeneULK1, KIAA0722
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymAUTOPHAGY-RELATED PROTEIN 1 HOMOLOG,HATG1,UNC-51-LIKE KINASE 1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
13RF1Ligand/IonN~2~-(4-AMINOPHENYL)-N~4~-(5-CYCLOPROPYL-1H-PYRAZOL-3-YL)QUINAZOLINE-2,4-DIAMINE
2TPO1Mod. Amino AcidPHOSPHOTHREONINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:22 , VAL A:30 , ALA A:44 , GLU A:93 , TYR A:94 , CYS A:95 , GLY A:98 , ASP A:102 , HIS A:105 , LEU A:145 , ASP A:165 , HOH A:540 , HOH A:553binding site for residue 3RF A 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4WNO)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Asp A:279 -Ala A:280

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4WNO)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4WNO)

(-) Exons   (0, 0)

(no "Exon" information available for 4WNO)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:273
                                                                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee..eeeeeeeeeee....eeeeeee......eeeeee.hhhhhhhhhhhhhhhhhhhh.........eeeeee....eeeeee.....hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhee....hhh.eeee.......hhhhheeee......ee.................hhhhhh.....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh...........hhhhhhhhhhhh........hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wno A   8 TETVGKFEFSRKDLIGHGAFAVVFKGRHRAAHDLEVAVKCINKKNLAKSQTLLGKEIKILKELKHENIVALYDFQEMANSVYLVMEYCNGGDLADYLHAMRTLSEDTIRLFLQQIAGAMRLLHSKGIIHRDLKPQNILLSNPAGRRANPNSIRVKIADFGFARYLQSNMMAAtLCGSPMYMAPEVIMSQHYDGKADLWSIGTIVYQCLTGKAPFQASSPQDLRLFYEKNKTLVPTIPRETSAPLRQLLLALLQRNHKDRMDFDEFFHHPFLDA 280
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177  |    187       197       207       217       227       237       247       257       267       277   
                                                                                                                                                                                                      180-TPO                                                                                                

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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4WNO)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4WNO)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4WNO)

(-) Gene Ontology  (36, 36)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ULK1_HUMAN | O753854wnp 5ci7

(-) Related Entries Specified in the PDB File

4wnp