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(-) Description

Title :  CRYSTAL STRUCTURE OF MBDR REGULATOR FROM AZOARCUS SP. CIB
 
Authors :  H. Liu, H. X. Liu, S. A. Macmahon, J. F. Juarez, M. T. Zamarro, C. Eberlein M. Carmona, E. Diaz, J. H. Naismith
Date :  11 Dec 14  (Deposition) - 24 Dec 14  (Release) - 27 May 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.76
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Transcription, Tetr Family (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. F. Juarez, H. Liu, M. T. Zamarro, S. Mcmahon, H. Liu, J. H. Naismith, C. Eberlein, M. Boll, M. Carmona, E. Diaz
Unraveling The Specific Regulation Of The Mbd Central Pathway For The Anaerobic Degradation Of 3-Methylbenzoate.
J. Biol. Chem. V. 290 12165 2015
PubMed-ID: 25795774  |  Reference-DOI: 10.1074/JBC.M115.637074

(-) Compounds

Molecule 1 - MBDR REGULATOR
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Organism Scientific: AZOARCUS SP. CIB
    Organism Taxid: 198107

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 7)

Asymmetric Unit (1, 7)
No.NameCountTypeFull Name
1MSE7Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 14)
No.NameCountTypeFull Name
1MSE14Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Gly A:86 -Pro A:87

 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:190
                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhh....hhhhhhhhhh..hhhhh..hhhhhhhhhhhhhhhhhh.hhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4uds A  15 ASTENILGCALDLFVKNGYRATTIDmIAARAGLGAIYFYFKTKDAImLmLLEEAEKYIVDPIDEYmANAGPLADAKLVKFINmQALLGVTKPQHVLLLILVSIDFSGTGDDIEKRAKAIYRRmYGHVEQLIAQGQTEGVFRSDSGSDELASIVmAAHDGVLIEWYRRPNELTGKTLTKALRSVLLNGLIV 206
                                    24        34     |  44  ||    56      | 66        76     |  86        96  |    106       116       126       136  |    146       156       166   |   176       186       196       206
                                                    40-MSE 47|           63-MSE             82-MSE           99-MSE                                 139-MSE                        170-MSE                                
                                                            50             65-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

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