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(-) Description

Title :  MRCK BETA IN COMPLEX WITH BDP00005290
 
Authors :  A. W. Schuettelkopf
Date :  10 Aug 14  (Deposition) - 22 Oct 14  (Release) - 10 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.71
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Myotonic Dystrophy Kinase-Related Cdc42-Binding Kinase, Metastasis, Cell Invasion, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. Unbekandt, D. R. Croft, D. Crighton, M. Mezna, D. Mcarthur, P. Mcconnell, A. W. Schuttelkopf, S. Belshaw, A. Pannifer, M. Sime, J. Bower, M. Drysdale, M. F. Olson
A Novel Small-Molecule Mrck Inhibitor Blocks Cancer Cell Invasion.
Cell Commun. Signal V. 12 54 2014
PubMed-ID: 25288205  |  Reference-DOI: 10.1186/PREACCEPT-1467335606136283

(-) Compounds

Molecule 1 - SERINE/THREONINE-PROTEIN KINASE MRCK BETA
    ChainsA
    EC Number2.7.11.1
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneCDC42BPB, KIAA1124
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymCDC42-BINDING PROTEIN KINASE BETA,CDC42BP-BETA,DMPK-LIKE BETA,MYOTONIC DYSTROPHY KINASE-RELATED CDC42-BINDING KINASE BETA, MYOTONIC DYSTROPHY PROTEIN KINASE-LIKE BETA

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit A
Biological Unit 1 (2x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 4)

Asymmetric Unit (3, 4)
No.NameCountTypeFull Name
13FV1Ligand/Ion4-CHLORO-1-(PIPERIDIN-4-YL)-N-[3-(PYRIDIN-2-YL)-1H-PYRAZOL-4-YL]-1H-PYRAZOLE-3-CARBOXAMIDE
2CL2Ligand/IonCHLORIDE ION
3EDO1Ligand/Ion1,2-ETHANEDIOL
Biological Unit 1 (2, 4)
No.NameCountTypeFull Name
13FV2Ligand/Ion4-CHLORO-1-(PIPERIDIN-4-YL)-N-[3-(PYRIDIN-2-YL)-1H-PYRAZOL-4-YL]-1H-PYRAZOLE-3-CARBOXAMIDE
2CL-1Ligand/IonCHLORIDE ION
3EDO2Ligand/Ion1,2-ETHANEDIOL

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:84 , ALA A:103 , LYS A:105 , MET A:153 , ASP A:154 , TYR A:155 , TYR A:156 , ASP A:204 , ASN A:205 , LEU A:207 , ASP A:218 , HOH A:723binding site for residue 3FV A 501
2AC2SOFTWAREGLY A:390 , PHE A:391 , LYS A:416binding site for residue CL A 502
3AC3SOFTWAREASP A:209 , VAL A:210binding site for residue CL A 503
4AC4SOFTWARELYS A:105 , LEU A:107 , ALA A:119 , CYS A:120 , GLU A:124 , GLY A:220binding site for residue EDO A 504

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4UAL)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4UAL)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4UAL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4UAL)

(-) Exons   (0, 0)

(no "Exon" information available for 4UAL)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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Chain A from PDB  Type:PROTEIN  Length:403
                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeeeeee.....eeeeeee.....eeeeeeeehhhhhhh....hhhhhhhhhhhh.......eeeeee...eeeeee......hhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee...........hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh.........hhhhhhhhhh...hhhhh.....hhhhhhhhhhh.....hhhhh..............................hhhhh...ee............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ual A  -1 GGSSAKVRLKKLEQLLLDGPWRNESALSVETLLDVLVCLYTECSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVVAVGTPDYISPEILQAMEDGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVILPPHTGFSGLHLPFIGFTFTTESCFSDRGSLKS 417
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228  ||   241       251  ||   263       273       283       293       303       313       323       333       343       353       363       382  ||   394       404       414   
                                                                                                                                                                                                                                                                  231|                254|                                                                                                                372|  ||                             
                                                                                                                                                                                                                                                                   235                 257                                                                                                                 382  ||                             
                                                                                                                                                                                                                                                                                                                                                                                                              385|                             
                                                                                                                                                                                                                                                                                                                                                                                                               388                             

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4UAL)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4UAL)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4UAL)

(-) Gene Ontology  (28, 28)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MRCKB_HUMAN | Q9Y5S23qfv 3tku 4uak

(-) Related Entries Specified in the PDB File

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