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(-) Description

Title :  DROSOPHILA STEM-LOOP BINDING PROTEIN COMPLEXED WITH HISTONE MRNA STEM-LOOP, SELENOMETHIONINE DERIVATIVE
 
Authors :  J. Zhang
Date :  25 Jun 14  (Deposition) - 17 Sep 14  (Release) - 24 Sep 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Slbp, Histone Mrna Stem-Loop, Rna Binding Protein-Rna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. Zhang, D. Tan, E. F. Derose, L. Perera, Z. Dominski, W. F. Marzluff, L. Tong, T. M. Hall
Molecular Mechanisms For The Regulation Of Histone Mrna Stem-Loop-Binding Protein By Phosphorylation.
Proc. Natl. Acad. Sci. Usa V. 111 E2937 2014
PubMed-ID: 25002523  |  Reference-DOI: 10.1073/PNAS.1406381111

(-) Compounds

Molecule 1 - HISTONE RNA HAIRPIN-BINDING PROTEIN
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentUNP RESIDUES 184-276
    GeneSLBP, CG11886
    Organism CommonFRUIT FLY
    Organism ScientificDROSOPHILA MELANOGASTER
    Organism Taxid7227
    SynonymHISTONE STEM-LOOP-BINDING PROTEIN
 
Molecule 2 - RNA (26-MER)
    ChainsB
    EngineeredYES
    Organism ScientificSYNTHETIC CONSTRUCT
    Organism Taxid32630
    SyntheticYES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 4)

Asymmetric/Biological Unit (2, 4)
No.NameCountTypeFull Name
1CA2Ligand/IonCALCIUM ION
2MSE2Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREA B:6binding site for residue CA B 101
2AC2SOFTWAREG B:9 , U B:15 , U B:16binding site for residue CA B 102

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4TV0)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Lys A:251 -Ser A:252
2Ser A:252 -Mse A:253

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4TV0)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4TV0)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:47
                                                                               
               SCOP domains ----------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhh............hhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------- PROSITE
                 Transcript ----------------------------------------------- Transcript
                 4tv0 A 188 TEADPAILSRRQKQIDYGKNTAATPNKYGKYSRRAFDGmVKIWRKSm 253
                                   197       207  ||   236       246      |
                                                210|            245-MSE 253-MSE
                                                 230                       

Chain B from PDB  Type:RNA  Length:26
                                                          
                 4tv0 B   1 GGCCAAAGGCCCUUUUCAGGGCCACC  26
                                    10        20      

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4TV0)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4TV0)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4TV0)

(-) Gene Ontology  (11, 11)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SLBP_DROME | Q9VAN64tuw 4tux

(-) Related Entries Specified in the PDB File

4tuw 4tux