4QTD - JenaLib

Title :   STRUCTURE OF HUMAN JNK1 IN COMPLEX WITH SCH772984 AND THE AMPPNP-HYDROLYSED TRIPHOSPHATE REVEALING THE SECOND TYPE-I BINDING MODE

Authors :   A. Chaikuad, T. Keates, F. Von Delft, C. H. Arrowsmith, A. M. Edwards, C S. Knapp, Structural Genomics Consortium (Sgc)

Date :   07 Jul 14 (Deposition) - 23 Jul 14 (Release) - 24 Sep 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.50

Chains :   Asym./Biol. Unit : A

Keywords :   Structural Genomics, Structural Genomics Consortium, Sgc, Transferase, Kinase, Mapk, Signalling, Inhibitor, Allosteric, Structural Genomics Consortium (Sgc), Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Chaikuad, E. M C Tacconi, J. Zimmer, Y. Liang, N. S. Gray, M. Tarsounas, S. Knapp
A Unique Inhibitor Binding Site In Erk1/2 Is Associated Wit Slow Binding Kinetics.
Nat. Chem. Biol. V. 10 853 2014
PubMed-ID: 25195011 | Reference-DOI: 10.1038/NCHEMBIO.1629

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 26)

Sites (26, 26)

Asymmetric Unit (26, 26)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLN A:120 , GLU A:217 , HIS A:221 , LYS A:222 , ILE A:223 , HOH A:687	BINDING SITE FOR RESIDUE EDO A 401
02	AC2	SOFTWARE	CYS A:220 , GLN A:240 , LEU A:274 , HOH A:648	BINDING SITE FOR RESIDUE EDO A 402
03	AC3	SOFTWARE	PRO A:244 , CYS A:245 , PHE A:248 , VAL A:303 , ILE A:304 , ASP A:305 , HOH A:539 , HOH A:565 , HOH A:728	BINDING SITE FOR RESIDUE EDO A 403
04	AC4	SOFTWARE	GLN A:317	BINDING SITE FOR RESIDUE EDO A 404
05	AC5	SOFTWARE	GLY A:201 , TYR A:202 , HOH A:581 , HOH A:737	BINDING SITE FOR RESIDUE EDO A 405
06	AC6	SOFTWARE	VAL A:80 , ASN A:81 , HIS A:141 , PRO A:333 , PRO A:335 , HOH A:708	BINDING SITE FOR RESIDUE EDO A 406
07	AC7	SOFTWARE	HIS A:82 , LYS A:83 , SER A:328	BINDING SITE FOR RESIDUE EDO A 407
08	AC8	SOFTWARE	ARG A:59 , GLN A:62 , GLU A:122 , PRO A:281 , EDO A:409 , HOH A:749	BINDING SITE FOR RESIDUE EDO A 408
09	AC9	SOFTWARE	ARG A:59 , GLU A:122 , LEU A:123 , VAL A:278 , LEU A:279 , PHE A:280 , PRO A:281 , EDO A:408 , HOH A:502 , HOH A:609	BINDING SITE FOR RESIDUE EDO A 409
10	BC1	SOFTWARE	TYR A:269 , SER A:307 , HOH A:816	BINDING SITE FOR RESIDUE EDO A 410
11	BC2	SOFTWARE	SER A:292 , HOH A:601	BINDING SITE FOR RESIDUE EDO A 411
12	BC3	SOFTWARE	ASN A:28 , ALA A:42 , ALA A:43 , TYR A:44 , ASN A:51 , ILE A:231 , HOH A:593	BINDING SITE FOR RESIDUE EDO A 412
13	BC4	SOFTWARE	ARG A:50 , ASN A:51 , ASP A:229	BINDING SITE FOR RESIDUE EDO A 413
14	BC5	SOFTWARE	LEU A:88 , LEU A:89 , ASN A:90 , HOH A:662	BINDING SITE FOR RESIDUE EDO A 414
15	BC6	SOFTWARE	HIS A:125 , GLU A:126 , SER A:129 , LYS A:290 , TYR A:320 , HOH A:750	BINDING SITE FOR RESIDUE EDO A 415
16	BC7	SOFTWARE	TRP A:324	BINDING SITE FOR RESIDUE EDO A 416
17	BC8	SOFTWARE	ASP A:326 , GLU A:329 , LYS A:340 , GLN A:341 , HOH A:517	BINDING SITE FOR RESIDUE EDO A 417
18	BC9	SOFTWARE	TYR A:130	BINDING SITE FOR RESIDUE EDO A 418
19	CC1	SOFTWARE	LYS A:203 , ASN A:205 , ALA A:306 , EPE A:423 , HOH A:668 , HOH A:814 , HOH A:815	BINDING SITE FOR RESIDUE EDO A 419
20	CC2	SOFTWARE	LEU A:241 , ALA A:267 , TYR A:269 , SER A:270	BINDING SITE FOR RESIDUE EDO A 420
21	CC3	SOFTWARE	GLN A:253	BINDING SITE FOR RESIDUE EDO A 421
22	CC4	SOFTWARE	GLU A:272 , PRO A:276 , ASP A:277 , ARG A:295 , HOH A:533 , HOH A:634	BINDING SITE FOR RESIDUE EDO A 422
23	CC5	SOFTWARE	LYS A:203 , GLU A:204 , ASN A:205 , GLU A:239 , TYR A:266 , GLY A:268 , TYR A:269 , ARG A:309 , SER A:311 , GLU A:314 , EDO A:419 , HOH A:507 , HOH A:554 , HOH A:671 , HOH A:741 , HOH A:814 , HOH A:815	BINDING SITE FOR RESIDUE EPE A 423
24	CC6	SOFTWARE	VAL A:40 , ALA A:53 , GLU A:109 , MET A:111 , ASP A:112 , ALA A:113 , ASN A:114 , CYS A:116 , GLN A:117 , GLN A:120 , SER A:155 , ASN A:156 , LEU A:168 , ANP A:425 , MG A:426 , HOH A:544 , HOH A:597 , HOH A:775 , HOH A:817 , HOH A:857	BINDING SITE FOR RESIDUE 38Z A 424
25	CC7	SOFTWARE	GLY A:35 , ALA A:36 , GLN A:37 , LYS A:153 , SER A:155 , ASN A:156 , THR A:188 , 38Z A:424 , MG A:426 , HOH A:607 , HOH A:818 , HOH A:819 , HOH A:821 , HOH A:867	BINDING SITE FOR RESIDUE ANP A 425
26	CC8	SOFTWARE	ASN A:156 , 38Z A:424 , ANP A:425	BINDING SITE FOR RESIDUE MG A 426

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:355
                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee..eeeeee..eeeeeeeeee..eeeeeeee....eeeeeeeee.hhhhhhhhhhhhhhhhhhhhh.......eeeee..........eeeeeee...eehhhhh....hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee.....eee......................hhhhhh......hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh..hhhhhh..hhhhhhhhhhh......hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh..hhhhh.hhhhhhh...hhhhhhhhhhh................hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qtd A   6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 363
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175|      188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358     
                                                                                                                                                                                                   175|                                                                                                                                                                                        
                                                                                                                                                                                                    179

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (42, 42)

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