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(-) Description

Title :  CRYSTAL STRUCTURE OF THE FP DOMAIN OF HUMAN PI31 PROTEASOME INHIBITOR
 
Authors :  J. Shang, X. Huang, Z. Du
Date :  17 Feb 14  (Deposition) - 25 Feb 15  (Release) - 20 May 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  A,B  (1x)
Biol. Unit 3:  C,D  (1x)
Keywords :  C-Terminal Extention Alpha Helix, Proteasome Inhibitor, Protein Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. Shang, X. Huang, Z. Du
The Fp Domains Of Pi31 And Fbxo7 Have The Same Protein Fold But Very Different Modes Of Protein-Protein Interaction.
J. Biomol. Struct. Dyn. V. 33 1528 2015
PubMed-ID: 25266262  |  Reference-DOI: 10.1080/07391102.2014.963675

(-) Compounds

Molecule 1 - PROTEASOME INHIBITOR PI31 SUBUNIT
    ChainsA, B, C, D
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainBL21(DE3)
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneHUMAN PI31, PSMF1
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymHPI31

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (1x)ABCD
Biological Unit 2 (1x)AB  
Biological Unit 3 (1x)  CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4OUH)

(-) Sites  (0, 0)

(no "Site" information available for 4OUH)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4OUH)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4OUH)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4OUH)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4OUH)

(-) Exons   (0, 0)

(no "Exon" information available for 4OUH)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:149
                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..eeeeee.......................eeeeeeee.....eeeeeeeee..eeeeeee...eeeeeehhhhh......hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ouh A  -2 SSPMAGLEVLFASAAPAITCRQDALVCFLHWEVVTHGYCGLGVGDQPGPNDKKSELLPAGWNNNKDLYVLRYEYKDGSRKLLVKAITVESSMILNVLEQVADLTLNLDDYIDAEHLGDFHRTYKNSEELRSRIVSGIITPIHEQWEKAN 150
                                     7        17        27        37        47        57        67        77        87       101       111       121       131       141         
                                                                                                                            95|                                                  
                                                                                                                            100                                                  

Chain B from PDB  Type:PROTEIN  Length:148
                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhh.....hhhhhhhhhhhhhhhhh.eeeeee.......................eeeeeeee.....eeeeeeeee..eeeeeee..eeeeeehhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ouh B  -2 SSPMAGLEVLFASAAPAITCRQDALVCFLHWEVVTHGYCGLGVGDQPGPNDKKSELLPAGWNNNKDLYVLRYEYKDGSRKLLVKAITVESSMILNVLEVADLTLNLDDYIDAEHLGDFHRTYKNSEELRSRIVSGIITPIHEQWEKAN 150
                                     7        17        27        37        47        57        67        77        87       102       112       122       132       142        
                                                                                                                            95|                                                 
                                                                                                                            101                                                 

Chain C from PDB  Type:PROTEIN  Length:147
                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhh......hhhhhhhhhhhhhhhhh.eeeeee.......................eeeeeeee.....eeeeeeeee..eeeeeee..eeeeee.hhh.......hhhhhh.hhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ouh C  -2 SSPMAGLEVLFASAAPAITCRQDALVCFLHWEVVTHGYCGLGVGDQPGPNDKKSELLPAGWNNNKDLYVLRYEYKDGSRKLLVKAITVESSMILNVLEVADLTLNLDDYIDAEHLGDFHRTYKNSEELRSRIVSGIITPIHEQWEKA 149
                                     7        17        27        37        47        57        67        77        87       102       112       122       132       142       
                                                                                                                            95|                                                
                                                                                                                            101                                                

Chain D from PDB  Type:PROTEIN  Length:147
                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.eeeeee.......................eeeeeeee.....eeeeeeeee..eeeeeee...eeeeeehhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ouh D  -1 SPMAGLEVLFASAAPAITCRQDALVCFLHWEVVTHGYCGLGVGDQPGPNDKKSELLPAGWNNNKDLYVLRYEYKDGSRKLLVKAITVESSMILNVLEQVADLTLNLDDYIDAEHLGDFHRTYKNSEELRSRIVSGIITPIHEQWEKA 149
                                     8        18        28        38        48        58        68        78        88      |102       112       122       132       142       
                                                                                                                           95|                                                 
                                                                                                                           100                                                 

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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4OUH)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4OUH)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4OUH)

(-) Gene Ontology  (30, 30)

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 Related Entries

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        PSMF1_HUMAN | Q925302vt8

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