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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN PRESEQUENCE PROTEASE IN COMPLEX WITH AMYLOID-BETA (1-40)
 
Authors :  J. V. King, W. G. Liang, W. J. Tang
Date :  01 Nov 13  (Deposition) - 14 May 14  (Release) - 23 Jul 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B,C  (1x)
Biol. Unit 2:  D,E,F  (1x)
Keywords :  M16 Metalloprotease, Alzheimer'S Disease, Zinc Metalloendoprotease, Monomethyllysine, Dimethyllysine, S-(Dimethylarsenic)Cysteine, Mitochondrial Matrix, Hydrolase-Protein Binding Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. V. King, W. G. Liang, K. P. Scherpelz, A. B. Schilling, S. C. Meredith W. J. Tang
Molecular Basis Of Substrate Recognition And Degradation By Human Presequence Protease.
Structure V. 22 996 2014
PubMed-ID: 24931469  |  Reference-DOI: 10.1016/J.STR.2014.05.003

(-) Compounds

Molecule 1 - PRESEQUENCE PROTEASE, MITOCHONDRIAL
    ChainsA
    EC Number3.4.24.-
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPPROEXH6
    Expression System StrainROSETTA(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    FragmentUNP RESIDUES 33-1037
    GeneKIAA1104, MP1, PITRM1
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymHPREP, PITRILYSIN METALLOPROTEINASE 1, METALLOPROTEASE 1, HMP1
 
Molecule 2 - BETA-AMYLOID PROTEIN 40
    ChainsB, E
    EngineeredYES
    FragmentUNP RESIDUES 572-711
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymBETA-APP40
    SyntheticYES
 
Molecule 3 - BETA-AMYLOID PROTEIN 40
    ChainsC, F
    EC Number3.4.24.-
    EngineeredYES
    FragmentUNP RESIDUES 33-1037
    MutationYES
    SynonymHPREP, PITRILYSIN METALLOPROTEINASE 1, METALLOPROTEASE 1, HMP1
    SyntheticYES
 
Molecule 4 - PRESEQUENCE PROTEASE, MITOCHONDRIAL
    ChainsD
    EngineeredYES
    FragmentSEE REMARK 999
    SynonymBETA-APP40

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit ABCDEF
Biological Unit 1 (1x)ABC   
Biological Unit 2 (1x)   DEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (7, 55)

Asymmetric Unit (7, 55)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2CAS5Mod. Amino AcidS-(DIMETHYLARSENIC)CYSTEINE
3GOL3Ligand/IonGLYCEROL
4MLY37Mod. Amino AcidN-DIMETHYL-LYSINE
5MLZ1Mod. Amino AcidN-METHYL-LYSINE
6UNK5Mod. Amino Acid
7ZN2Ligand/IonZINC ION
Biological Unit 1 (5, 24)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2CAS4Mod. Amino AcidS-(DIMETHYLARSENIC)CYSTEINE
3GOL1Ligand/IonGLYCEROL
4MLY16Mod. Amino AcidN-DIMETHYL-LYSINE
5MLZ1Mod. Amino AcidN-METHYL-LYSINE
6UNK-1Mod. Amino Acid
7ZN-1Ligand/IonZINC ION
Biological Unit 2 (3, 24)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2CAS1Mod. Amino AcidS-(DIMETHYLARSENIC)CYSTEINE
3GOL2Ligand/IonGLYCEROL
4MLY21Mod. Amino AcidN-DIMETHYL-LYSINE
5MLZ-1Mod. Amino AcidN-METHYL-LYSINE
6UNK-1Mod. Amino Acid
7ZN-1Ligand/IonZINC ION

(-) Sites  (7, 7)

Asymmetric Unit (7, 7)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:104 , HIS A:108 , GLU A:205 , PHE B:20BINDING SITE FOR RESIDUE ZN A 1101
2AC2SOFTWAREPHE A:168 , HIS A:254 , ALA A:255BINDING SITE FOR RESIDUE GOL A 1102
3AC3SOFTWAREASP A:679 , ASP D:679BINDING SITE FOR RESIDUE ACT A 1103
4AC4SOFTWAREASN A:777 , ARG A:779 , ILE A:839BINDING SITE FOR RESIDUE ACT A 1104
5AC5SOFTWAREASP D:735BINDING SITE FOR RESIDUE GOL D 1101
6AC6SOFTWAREASP D:413 , LYS D:494BINDING SITE FOR RESIDUE GOL D 1102
7AC7SOFTWAREHIS D:104 , HIS D:108 , GLU D:205 , PHE E:20 , ALA E:21BINDING SITE FOR RESIDUE ZN E 101

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4NGE)

(-) Cis Peptide Bonds  (10, 10)

Asymmetric Unit
No.Residues
1Ala A:31 -Ala A:32
2Ser A:317 -Phe A:318
3Ala A:580 -Gly A:581
4Pro A:815 -His A:816
5Lys A:972 -Gly A:973
6Gln B:15 -Lys B:16
7Ala B:21 -Glu B:22
8Unk C:6 -Unk C:7
9Pro D:322 -Ser D:323
10Val D:822 -Pro D:823

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4NGE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4NGE)

(-) Exons   (0, 0)

(no "Exon" information available for 4NGE)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:985
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhh....ee..eeeeeeeeehhhheeeeeeee.....eeeeee.....eeeeeeee.......hhhhhhhhhhhhh.......hhhhhhh....eeee..ee...eeeeeeee.hhhhhhhhhhhhhhhhhh...hhhhhhhhh.eeee.........eeeehhhhhhhhhhh.hhhhhhhhhhhhhhh..hhhhh.......hhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhhhh..................eeeeeee...........eeeeeeeeeee..hhhhhhhhhhhhhhhhh...hhhhhhhhhhh...ee....eee....eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhh.hhhhhhhhhhh.....eeeeeeee..hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh..........hhhhh.........eeeee...eeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhh........hhhhhhhhhhhheeeeeeeeeeee......eeeeeeeeeeeee..hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh.........eeee...eeeee........eeeeee.....eeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhh......eeeeee....eeeeeeeee..hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh........hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeeeee..hhhhhh....eee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4nge A   31 AAAcERALQYkLGDKIHGFTVNQVTSVPELFLTAVkLTHDDTGARYLHLAREDTNNLFSVQFRTTPMDSTGVPHILQHTVLcGSQKYPCRDPFFKMLNRSLSTFMNAFTASDYTLYPFSTQNPKDFQNLLSVYLDATFFPcLRELDFWQEGWRLEHENPSDPQTPLVFkGVVFNEMKGAFTDNERIFSQHLQNRLLPDHTYSVVSGGDPLCIPELTWEQLkQFHATHYHPSNARFFTYGNFPLEQHLkQIHEEALSKFQKIEPSTVVPAQTPWDKPREFQITCGPDSFATPSKQTTVSVSFLLPDITDTFEAFTLSLLSSLLTSGPNSPFYkALIESGLGTDFSPDVGYNGYTREAYFSVGLQGIVEKDIETVRSLIDRTIDEVVEKGFEDDRIEALLHkIEIQMKHQSTSFGLMLTSYIASCWNHDGDPVELLkLGNQLAKFRQCLQENPKFLQEKVKQYFKNNQHKLTLSMRPDDKYHEkQAQVEATKLKQkVEALSPGDRQQIYEKGLELRSQQSKPQDAScLPALKVSDIEPTIPVTELDVVLTAGDIPVQYCAQPTNGMVYFRAFSSLNTLPEELRPYVPLFCSVLTkLGCGLLDYREQAQQIELkTGGMSASPHVLPDDSHMDTYEQGVLFSSLCLDRNLPDMMQLWSEIFNNPCFEEEEHFKVLVKMTAQELANGIPDSGHLYASIRAGRTLTPAGDLQETFSGMDQVRLMKRIAEMTDIKPILRKLPRIKKHLLNGDNMRCSVNATPQQMPQTEKAVEDFLRSIGRSPVRPHTVEKPVIRKLVMEPTFKPWQMkTHFLMPFPVNYVGECIRTVPYTDPDHASLKILARLMTAKFLHTEIREkGGAYGGGAkLSHNGIFTLYSYRDPNTIETLQSFGKAVDWAkSGkFTQQDIDEAKLSVFSTVDAPVAPSDKGMDHFLYGLSDEMKQAHREQLFAVSHDKLLAVSDRYLGTGKSTHGLAILGPENPKIAKDPSWIIR 1037
                               |    40|       50        60     |  70        80        90       100       110 |     120       130       140       150       160       170|      180       190       200       210       220       230       240       250|      260       270       280       290       300       310       320|      331       341       351       361 |     371       381       391       401       411       421       431       441       451       461    |  471       481       491       501       511 |     521   |   531       541       551    |  561       571       581       591       601       611       621  |    631       641|      651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801    || 816    || 842       852 |     862       872       882       892       902       912       922       932       942|  |   952       962       972       982       992      1002      1012      1022      1032     
                               |     41-MLY                   66-MLY                                       112-CAS                                                    171-CAS                     199-MLY                                             251-MLY                    278-MLY                                   320|                                      363-MLY                                                             431-MLY                            466-MLY                                        513-MLY     525-MLY                        556-CAS                                                             624-MLY           642-MLY                                                                                                                                                             806|      821|             854-MLY                                         902-MLY  911-MLY                         943-MLY                                                                                          
                              34-CAS                                                                                                                                                                                                                                                                                        322                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  812       838                                                                                                         946-MLZ                                                                                       

Chain B from PDB  Type:PROTEIN  Length:9
                                          
               SCOP domains --------- SCOP domains
               CATH domains --------- CATH domains
               Pfam domains --------- Pfam domains
         Sec.struct. author ......... Sec.struct. author
                 SAPs(SNPs) --------- SAPs(SNPs)
                    PROSITE --------- PROSITE
                 Transcript --------- Transcript
                4nge B   15 QKLVFFAED   23

Chain C from PDB  Type:PROTEIN  Length:4
                                     
               SCOP domains ---- SCOP domains
               CATH domains ---- CATH domains
               Pfam domains ---- Pfam domains
         Sec.struct. author .... Sec.struct. author
                 SAPs(SNPs) ---- SAPs(SNPs)
                    PROSITE ---- PROSITE
                 Transcript ---- Transcript
                4nge C    1 xxxx    7
                            ||||
                            1-UNK
                             5-UNK
                              6-UNK
                               7-UNK

Chain D from PDB  Type:PROTEIN  Length:987
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhh......ee..eeeeeeeeehhhheeeeeeee.....eeeeee.....eeeeeeee.......hhhhhhhhhhhhh.......hhhhhhh....eeee..ee...eeeeeeee.hhhhhhhhhhhhhhhhhh...hhhhhhhhh.eeee.........eeeehhhhhhhhhhh.hhhhhhhhhhhhhhh..hhhhh.......hhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhhhh..................eeeeeee.......eeeeeeeeeee..hhhhhhhhhhhhhhhhh...hhhhhhh.......ee....eee....eeeeeeeeeeehhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhh.hhhhhhhhhhh.....eeeeeeee..hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh..........hhhhh.........eeeee...eeeeeee.....eeeeeeeee....hhhhhhhhhhhhhhh........hhhhhhhhhhhhh..eeeeeeeee......eeeeeeeeeeeee..hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh..............eeeee...eeeeee........eeeeee.....eeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhh......eeeeee....eeeeeeeee..hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeeeee..hhhhhh....ee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4nge D   32 AACERALQYKLGDKIHGFTVNQVTSVPELFLTAVKLTHDDTGARYLHLAREDTNNLFSVQFRTTPMDSTGVPHILQHTVLCGSQkYPCRDPFFkMLNRSLSTFMNAFTASDYTLYPFSTQNPKDFQNLLSVYLDATFFPCLRELDFWQEGWRLEHENPSDPQTPLVFKGVVFNEMkGAFTDNERIFSQHLQNRLLPDHTYSVVSGGDPLCIPELTWEQLKQFHATHYHPSNARFFTYGNFPLEQHLKQIHEEALSkFQkIEPSTVVPAQTPWDKPREFQITCGPDPSKQTTVSVSFLLPDITDTFEAFTLSLLSSLLTSGPNSPFYkALIESGLGTDFSPDVGYNGYTREAYFSVGLQGIVEKDIETVRSLIDRTIDEVVEKGFEDDRIEALLHKIEIQMKHQSTSFGLMLTSYIASCWNHDGDPVELLKLGNQLAKFRQCLQENPKFLQEkVKQYFKNNQHKLTLSMRPDDKYHEKQAQVEATKLKQkVEALSPGDRQQIYEkGLELRSQQSKPQDAScLPALKVSDIEPTIPVTELDVVLTAGDIPVQYCAQPTNGMVYFRAFSSLNTLPEELRPYVPLFCSVLTkLGCGLLDYREQAQQIELkTGGMSASPHVLPDDSHMDTYEQGVLFSSLCLDRNLPDMMQLWSEIFNNPCFEEEEHFKVLVkMTAQELANGIPDSGHLYASIRAGRTLTPAGDLQETFSGMDQVRLMKRIAEMTDIKPILRkLPRIkKHLLNGDNMRCSVNATPQQMPQTEkAVEDFLRSIGRSKKERRPVRPHTVEKPVPVIRKLVMEPTFKPWQMkTHFLMPFPVNYVGECIRTVPYTDPDHASLkILARLMTAKFLHTEIREKGGAYGGGAKLSHNGIFTLYSYRDPNTIETLQSFGkAVDWAkSGkFTQQDIDEAKLSVFSTVDAPVAPSDkGMDHFLYGLSDEMKQAHREQLFAVSHDKLLAVSDRYLGTGKSTHGLAILGPENPKIAKDPSWIIR 1037
                                    41        51        61        71        81        91       101       111    |  121   |   131       141       151       161       171       181       191       201     | 211       221       231       241       251       261       271       281     | 291       301       311    || 326       336       346       356      |366       376       386       396       406       416       426       436       446       456       466       476       486 |     496       506       516       526       536   |   546       556       566       576       586       596       606       616       626       636     | 646       656       666       676       686       696       706       716       726       736       746       756       766  |    776       786       796       806       816      |840       850   |   860       870       880   |   890       900       910       920       930      |940  |  | 950       960       970 |     980       990      1000      1010      1020      1030       
                                                                                                              116-MLY  125-MLY                                                                           207-MLY                                                                         287-MLY                      316|                                      363-MLY                                                                                                                      488-MLY                              525-MLY        540-MLY         556-CAS                                                             624-MLY           642-MLY                                                       704-MLY                                                     764-MLY|                      794-MLY                      823|             854-MLY                       884-MLY                                              937-MLY |  |                       972-MLY                                                             
                                                                                                                                                                                                                                                                                            290-MLY                    322                                                                                                                                                                                                                                                                                                                                                                                                                                                            769-MLY                                                838                                                                                                      943-MLY                                                                                          
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         946-MLY                                                                                       

Chain E from PDB  Type:PROTEIN  Length:5
                                      
               SCOP domains ----- SCOP domains
               CATH domains ----- CATH domains
               Pfam domains ----- Pfam domains
         Sec.struct. author ..... Sec.struct. author
                 SAPs(SNPs) ----- SAPs(SNPs)
                    PROSITE ----- PROSITE
                 Transcript ----- Transcript
                4nge E   18 VFFAE   22

Chain F from PDB  Type:PROTEIN  Length:1
                                  
               SCOP domains - SCOP domains
               CATH domains - CATH domains
               Pfam domains - Pfam domains
         Sec.struct. author . Sec.struct. author
                 SAPs(SNPs) - SAPs(SNPs)
                    PROSITE - PROSITE
                 Transcript - Transcript
                4nge F   18 x    1
                                 |
                                 1-UNK

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4NGE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4NGE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4NGE)

(-) Gene Ontology  (123, 124)

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(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        A4_HUMAN | P050671aap 1amb 1amc 1aml 1ba4 1ba6 1bjb 1bjc 1brc 1ca0 1hz3 1iyt 1mwp 1owt 1qcm 1qwp 1qxc 1qyt 1taw 1tkn 1uo7 1uo8 1uoa 1uoi 1x11 1z0q 1ze7 1ze9 1zjd 2beg 2bom 2bp4 2fjz 2fk1 2fk2 2fk3 2fkl 2fma 2g47 2ipu 2lfm 2llm 2lmn 2lmo 2lmp 2lmq 2lnq 2loh 2lp1 2lz3 2lz4 2m4j 2m9r 2m9s 2mgt 2mj1 2mpz 2mvx 2mxu 2nao 2otk 2r0w 2wk3 2y29 2y2a 2y3j 2y3k 2y3l 3ayu 3bae 3bkj 3dxc 3dxd 3dxe 3gci 3ifl 3ifn 3ifo 3ifp 3jq5 3jql 3jti 3ktm 3l33 3l81 3moq 3mxc 3mxy 3nyj 3nyl 3ovj 3ow9 3sv1 3u0t 3umh 3umi 3umk 4hix 4jfn 4m1c 4mdr 4mvi 4mvk 4mvl 4ojf 4onf 4ong 4pqd 4pwq 4xxd 5aef 5am8 5amb 5buo 5c67 5csz 5how 5hox 5hoy 5kk3 5kna 5myo
        PREP_HUMAN | Q5JRX34l3t 4rpu

(-) Related Entries Specified in the PDB File

4l3t SUBSTRATE-FREE HUMAN PRESEQUENCE PROTEASE