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(-) Description

Title :  CRYSTAL STRUCTURE OF CDC20 AND APCIN COMPLEX
 
Authors :  X. Luo, W. Tian, H. Yu
Date :  03 Oct 13  (Deposition) - 20 Aug 14  (Release) - 05 Nov 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A
Keywords :  Cell Cycle, Mitosis, Securin, Ubiquitination, Wd40, Cell Cycle-Cell Cycle Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. L. Sackton, N. Dimova, X. Zeng, W. Tian, M. Zhang, T. B. Sackton, J. Meaders, K. L. Pfaff, F. Sigoillot, H. Yu, X. Luo, R. W. King
Synergistic Blockade Of Mitotic Exit By Two Chemical Inhibitors Of The Apc/C.
Nature V. 514 646 2014
PubMed-ID: 25156254  |  Reference-DOI: 10.1038/NATURE13660
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CELL DIVISION CYCLE PROTEIN 20 HOMOLOG
    Chains: A
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Common: FALL ARMYWORM
    Expression System Taxid: 7108
    Expression System Vector: PFASTBAC
    Expression System Vector Type: BACULOVIRUS
    Fragment: WD DOMAIN RESIDUES 165-477
    Gene: CDC20
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: P55CDC

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1WR71Ligand/Ion2-(2-METHYL-5-NITRO-1H-IMIDAZOL-1-YL)ETHYL [(1R)-2,2,2-TRICHLORO-1-(PYRIMIDIN-2-YLAMINO)ETHYL]CARBAMATE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:176 , ASP A:177 , LEU A:202 , TYR A:207 , TRP A:209 , ILE A:216BINDING SITE FOR RESIDUE WR7 A 501

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4N14)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Phe A:420 -Ala A:421
2Tyr A:430 -Pro A:431

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4N14)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4N14)

(-) Exons   (0, 0)

(no "Exon" information available for 4N14)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:313
                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeee............eee....eeeeee..eeeeee.....eeeeee.......eeeeee.....eeeeee...eeeeee....eeeeeee.....eeeeeee..eeeeee...eeeeee......eeeeee.....eeeeee.....eeeeee....eeeee...........eee......eeeeee......eeeeee.....eeeeee....eeeeeee....eeeeeee....eeeeee......eeeee....eeeeee......eeeeee......eeeee...eeeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4n14 A 165 CRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDP 477
                                   174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4N14)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4N14)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4N14)

(-) Gene Ontology  (36, 36)

Asymmetric/Biological Unit(hide GO term definitions)

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  4n14
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  CDC20_HUMAN | Q12834
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CDC20_HUMAN | Q12834: 4gga 4ggc 4ggd 5g04 5khr 5khu 5lcw

(-) Related Entries Specified in the PDB File

4gga 4ggc 4ggd