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(-) Description

Title :  ACYL-COENZYME A THIOESTERASE 12 IN COMPLEX WITH ADP
 
Authors :  C. M. D. Swarbrick, J. K. Forwood
Date :  12 Sep 13  (Deposition) - 16 Jul 14  (Release) - 01 Apr 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (3x)
Keywords :  Hotdog, Acot12, Cach, Stard15, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  C. M. Swarbrick, N. Roman, N. Cowieson, E. I. Patterson, J. Nanson, M. I. Siponen, H. Berglund, L. Lehtio, J. K. Forwood
Structural Basis For Regulation Of The Human Acetyl-Coa Thioesterase 12 And Interactions With The Steroidogenic Acute Regulatory Protein-Related Lipid Transfer (Start) Domain.
J. Biol. Chem. V. 289 24263 2014
PubMed-ID: 25002576  |  Reference-DOI: 10.1074/JBC.M114.589408

(-) Compounds

Molecule 1 - ACYL-COENZYME A THIOESTERASE 12
    ChainsA
    EC Number3.1.2.1
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPNIC-BSA4
    Expression System StrainBL21(DE3) PLYSS
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    FragmentUNP RESIDUES 7-336
    GeneACOT12, CACH, CACH1, STARD15
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymACYL-COA THIOESTERASE 12, ACYL-COA THIOESTER HYDROLASE 12, CYTOPLASMIC ACETYL-COA HYDROLASE 1, CACH-1, HCACH-1, START DOMAIN- CONTAINING PROTEIN 15, STARD15

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit A
Biological Unit 1 (3x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
1ADP1Ligand/IonADENOSINE-5'-DIPHOSPHATE
2COA1Ligand/IonCOENZYME A
Biological Unit 1 (2, 6)
No.NameCountTypeFull Name
1ADP3Ligand/IonADENOSINE-5'-DIPHOSPHATE
2COA3Ligand/IonCOENZYME A

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL A:52 , THR A:53 , ALA A:54 , SER A:55 , PHE A:81 , SER A:82 , THR A:83 , SER A:84 , THR A:110 , ARG A:144 , THR A:200 , LYS A:234 , PHE A:235 , ARG A:236 , GLY A:237 , PRO A:238 , HOH A:585BINDING SITE FOR RESIDUE COA A 401
2AC2SOFTWARETHR A:248 , ALA A:249 , ILE A:250 , ASN A:252 , GLY A:262 , VAL A:263 , ARG A:264 , SER A:283 , PHE A:285 , ARG A:312 , ARG A:313 , HOH A:567 , HOH A:572 , HOH A:577 , HOH A:578BINDING SITE FOR RESIDUE ADP A 402

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4MOB)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Val A:116 -Gly A:117

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4MOB)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4MOB)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:319
                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.hhhhh......hhhhhhhhhhhhhhhhhhhhhh..eeeeee..ee........eeeeeeeeeeee...eeeeeeeeeeee.....eeeeeeeeeeeee................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhh...hhhhheeeeee.hhhhh......hhhhhhhhhhhhhhhhhhhhhh.eeeeeee..ee.........eeeeeeeeeeee..eeeeeeeeeeehhhhhhh...eeeeeeeeeeeee...............hhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4mob A   8 EVVMSQAIQPAHATARGELSAGQLLKWIDTTACLAAEKHAGVSCVTASVDDIQFEETARVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKPVTLLTEQDHVEHNLAAERRKVRLQHEDTFNNLMKESSKFDDLIFDEEEGAVSTRGTSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFKFRGPSTVGDRLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRHINSAFLIYNAADDKENLITFPRIQPISKDDFRRYRGAIARKRIRLG 326
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317         

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4MOB)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MOB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4MOB)

(-) Gene Ontology  (14, 14)

Asymmetric Unit(hide GO term definitions)

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        ACO12_HUMAN | Q8WYK03b7k 4moc

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4moc