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(-) Description

Title :  STRUCTURE OF RSK2 CTD BOUND TO 3-(3-(1H-PYRROLO[2,3-B]PYRIDINE-3-CARBONYL)PHENYL)-2-CYANOACRYLAMIDE
 
Authors :  R. M. Miller, V. O. Paavilainen, S. Krishnan, I. M. Serafimova, J. Taunt
Date :  28 Feb 13  (Deposition) - 10 Apr 13  (Release) - 24 Apr 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym./Biol. Unit :  A
Keywords :  Protein Kinase, Phosphorylation, Covalent Inhibitor, Transferase- Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  R. M. Miller, V. O. Paavilainen, S. Krishnan, I. M. Serafimova, J. Taunton
Electrophilic Fragment-Based Design Of Reversible Covalent Kinase Inhibitors.
J. Am. Chem. Soc. V. 135 5298 2013
PubMed-ID: 23540679  |  Reference-DOI: 10.1021/JA401221B

(-) Compounds

Molecule 1 - RIBOSOMAL PROTEIN S6 KINASE ALPHA-3
    ChainsA
    EC Number2.7.11.1
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneRPS6KA3, ISPK1, MAPKAPK1B, RSK2
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymS6K-ALPHA-3, 90 KDA RIBOSOMAL PROTEIN S6 KINASE 3, P90-RSK 3, P90RSK3, INSULIN-STIMULATED PROTEIN KINASE 1, ISPK-1, MAP KINASE- ACTIVATED PROTEIN KINASE 1B, MAPK-ACTIVATED PROTEIN KINASE 1B, MAPKAP KINASE 1B, MAPKAPK-1B, RIBOSOMAL S6 KINASE 2, RSK-2, PP90RSK2

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
11LC1Ligand/Ion(2R)-2-CYANO-3-[3-(1H-PYRROLO[2,3-B]PYRIDIN-3-YLCARBONYL)PHENYL]PROPANAMIDE
2NA1Ligand/IonSODIUM ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:428 , CYS A:436 , ALA A:449 , LYS A:451 , THR A:493 , MET A:496 , LEU A:546 , ASP A:561 , HOH A:914BINDING SITE FOR RESIDUE 1LC A 801
2AC2SOFTWAREGLY A:471 , HIS A:473 , PRO A:474 , ILE A:476 , THR A:478BINDING SITE FOR RESIDUE NA A 802

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4JG7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4JG7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4JG7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4JG7)

(-) Exons   (0, 0)

(no "Exon" information available for 4JG7)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:307
                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhh.eeeeee......eeeeee.....eeeeeeee.....hhhhhhhhhhhh.......eeeeee...eeeeeee.....hhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....hhh.eee......ee..................hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh.....hhhhh..hhhhhhhhhhhh........hhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4jg7 A 405 HSIVQQLHRNSIQFTDGYEVKEDIGVYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAMAATYSALNRN 713
                                   414       424     ||436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666       676       686       696       706       
                                                   430|                                                                                                                                                                                                                                                                                        
                                                    433                                                                                                                                                                                                                                                                                        

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4JG7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4JG7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4JG7)

(-) Gene Ontology  (31, 31)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        KS6A3_HUMAN | P518124d9t 4d9u 4jg6 4jg8 4nus 4nw5 4nw6 5d9k 5d9l

(-) Related Entries Specified in the PDB File

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