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(-) Description

Title :  SELECTIVE & BRAIN-PERMEABLE POLO-LIKE KINASE-2 (PLK-2) INHIBITORS THAT REDUCE -SYNUCLEIN PHOSPHORYLATION IN RAT BRAIN
 
Authors :  H. Pan
Date :  29 Nov 12  (Deposition) - 20 Nov 13  (Release) - 20 Nov 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym./Biol. Unit :  A
Keywords :  Polo-Like Kinase-2 (Plk-2), Synuclein, Parkinsons Disease, Kinase Inhibitor, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  D. L. Aubele, R. K. Hom, M. Adler, R. A. Galemmo, S. Bowers, A. P. Truong, H. Pan, P. Beroza, R. J. Neitz, N. Yao, M. Lin, G. Tonn, H. Zhang, M. P. Bova, Z. Ren, D. Tam, L. Ruslim, J. Baker, L. Diep, K. Fitzgerald, J. Hoffman, R. Motter, D. Fauss, P. Tanaka, M. Dappen, J. Jagodzinski, W. Chan, A. W. Konradi, L. Latimer, Y. L. Zhu, H. L. Sham, J. P. Anderson, M. Bergeron, D. R. Artis
Selective And Brain-Permeable Polo-Like Kinase-2 (Plk-2) Inhibitors That Reduce Alpha-Synuclein Phosphorylation In Rat Brain.
Chemmedchem V. 8 1295 2013
PubMed-ID: 23794260  |  Reference-DOI: 10.1002/CMDC.201300166

(-) Compounds

Molecule 1 - SERINE/THREONINE-PROTEIN KINASE PLK2
    ChainsA
    EC Number2.7.11.21
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentPLK2 KINASE DOMAIN
    GenePLK2, SNK
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymPOLO-LIKE KINASE 2, PLK-2, HPLK2, SERINE/THREONINE-PROTEIN KINASE SNK, HSNK, SERUM-INDUCIBLE KINASE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
11C71Ligand/Ion(7R)-8-CYCLOPENTYL-7-ETHYL-5-METHYL-2-(2-PHENYL-1H-IMIDAZOL-1-YL)-7,8-DIHYDROPTERIDIN-6(5H)-ONE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:96 , ALA A:109 , VAL A:143 , LEU A:159 , GLU A:160 , TYR A:161 , CYS A:162 , HIS A:169 , PHE A:212BINDING SITE FOR RESIDUE 1C7 A 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4I6F)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4I6F)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4I6F)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:285
                                                                                                                                                                                                                                                                                                                             
               SCOP domains d4i6fa_ A: automated matches                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee......eeeeeeeeeee..eeeeeeee.....eeeeeeee.hhh.hhhhhhhhhhhhhhhh.........eeeeee...eeeeeee.....hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee.hhhhhee..................hhhhhh....hhhhhhhhhhhhhhhhhhh........hhhhhhhhhhh........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhh........hhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4i6f A  71 RIIVDPTTGKRYSRGKTLGKGGFAKCYEMTDLTNNKVYAAKIIPHSRVSKPHQREKIDKEIELHRILHHKHVVQFYHYFEDKENIYILLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINESMELKVGDFGLAARLEPLEHRRRTICGTPNYLSPEVLNKQGHGAESDIWALGCVMYTMLLGRPPFETTNLKETYRSIREARYTMPSSLLAPAKHLIASMLSKNPEDRPSLDDIIRHDFFTQGFTPDRLSSSCCHTVPDFH 355
                                    80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350     

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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4I6F)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4I6F)

(-) Gene Ontology  (41, 41)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PLK2_HUMAN | Q9NYY34i5m 4i5p 4i6b 4i6h 4rs6 4xb0

(-) Related Entries Specified in the PDB File

4i5m 4i5p 4i6b 4i6h