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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN CATENIN-BETA-LIKE 1 56 KDA FRAGMENT
 
Authors :  Z. Du, X. Huang, G. Wang, Y. Wu
Date :  19 Oct 12  (Deposition) - 31 Jul 13  (Release) - 21 Aug 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym./Biol. Unit :  A
Keywords :  All Alpha-Helical, Armadillo Repeats, Protein Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  X. Huang, G. Wang, Y. Wu, Z. Du
The Structure Of Full-Length Human Ctnnbl1 Reveals A Distinct Member Of The Armadillo-Repeat Protein Family.
Acta Crystallogr. , Sect. D V. 69 1598 2013
PubMed-ID: 23897482  |  Reference-DOI: 10.1107/S0907444913011360

(-) Compounds

Molecule 1 - BETA-CATENIN-LIKE PROTEIN 1
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET48B
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    GeneC20ORF33, CTNNBL1, PP8304
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymNUCLEAR-ASSOCIATED PROTEIN, NAP, TESTIS DEVELOPMENT PROTEIN NYD-SP19

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 19)

Asymmetric/Biological Unit (1, 19)
No.NameCountTypeFull Name
1MSE19Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 4HNM)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4HNM)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Lys A:102 -Phe A:103

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4HNM)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4HNM)

(-) Exons   (0, 0)

(no "Exon" information available for 4HNM)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:484
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.hhhhhhhhhhh.hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hnm A  75 EPLDESSVKKmILTFEKRSYKNQELRIKFPFmESELDLNDIIQEmHVVATmPDLYHLLVELNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVDGQVVALLVQNLERLDESVKEEADGVHNTLAIVENmAEFRPEmCTEGAQQGLLQWLLKRLKAKmPFDANKLYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSVFKRHNPSTAEEQEmmENLFDSLCSCLmLSSNRERFLKGEGLQLmNLmLREKKISRSSALKVLDHAmIGPEGTDNCHKFVDILGLRTIFPLFmKSPRKIKKVGTTEKEHEEHVCSILASLLRNLRGQQRTRLLNKFTENDSEKVDRLmELHFKYLGAmQVADKKIEGEKHDmVRRGEIIDNDTEEEFYLRRLDAGLFVLQHICYImAEICNANVPQIRQRVHQILNmRGSSIKIVRHIIKEYAENIGDGRSPEFRENEQKRILGLLENF 563
                                    84|       94       104||     119    |  129|      139       149       159       169       179       189       199       209       219     | 229  |    239       249   |   259       269       279       289       299       309|      319  |    329       339  |    349       359 |     369       379       389       399       409       419       429       439  |    449  |    459      |469       479       489       499|      509       519 |     529       539       549       559    
                                     85-MSE            104||          124-MSE |                                                                                            225-MSE  |                  253-MSE                                                 309-MSE      322-MSE          339-MSE               361-MSE                   387-MSE                                                442-MSE   452-MSE       466-MSE                           500-MSE              521-MSE                                      
                                                        110|                130-MSE                                                                                               232-MSE                                                                       310-MSE                         342-MSE                                                                                                                                                                                                                         
                                                         111-MSE                                                                                                                                                                                                                                                                                                                                                                                                                                                                

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4HNM)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4HNM)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4HNM)

(-) Gene Ontology  (14, 14)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Lys A:102 - Phe A:103   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CTBL1_HUMAN | Q8WYA64cb8 4cb9 4cba 4hm9 4mfu 4mfv

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4HNM)