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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN C16ORF57
 
Authors :  C. Hilcenko, P. J. Simpson, A. J. Warren
Date :  21 Sep 12  (Deposition) - 06 Feb 13  (Release) - 22 May 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.10
Chains :  Asym./Biol. Unit :  A
Keywords :  2H Phosphoesterase, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Hilcenko, P. J. Simpson, A. J. Finch, F. R. Bowler, M. J. Churcher, L. Jin, L. C. Packman, A. Shlien, P. Campbell, M. Kirwan, I. Dokal, A. J. Warren
Aberrant 3' Oligoadenylation Of Spliceosomal U6 Small Nuclear Rna In Poikiloderma With Neutropenia.
Blood V. 121 1028 2013
PubMed-ID: 23190533  |  Reference-DOI: 10.1182/BLOOD-2012-10-461491

(-) Compounds

Molecule 1 - UPF0406 PROTEIN C16ORF57
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A
    Expression System Strain: C41 (DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 73-265
    Gene: C16ORF57
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1CL1Ligand/IonCHLORIDE ION
2GOL1Ligand/IonGLYCEROL

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETRP A:133 , PHE A:196 , ASN A:197 , HOH A:434 , HOH A:435BINDING SITE FOR RESIDUE GOL A 301
2AC2SOFTWAREPRO A:111 , ARG A:112BINDING SITE FOR RESIDUE CL A 302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4H7W)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Glu A:238 -Asp A:239

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4H7W)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4H7W)

(-) Exons   (0, 0)

(no "Exon" information available for 4H7W)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:187
                                                                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeee..hhhhhhhhhhhhhhhhh.....ee...eeee....eeee..hhhhhhhhhhhhhh.....ee.eeeeeeee.....eeeeeeee..hhhhhhhhhhhhhhhhhhh...........eeeeeeee..hhhhhhhhhhhhhhhhhhh...hhhhhhee..eeeeee..eeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h7w A  79 GNWATHVYVPYEAKEEFLDLLDVLLPHAQTYVPRLVRMKVFHLSLSQSVVLRHHWILPFVQALKARMTSFHRFFFTANQVKIYTNQEKTRTFIGLEVTSGHAQFLDLVSEVDRVMEEFNLTTFYQDPSFHLSLAWCVGDARLQLEGQCLQELQAIVDGFEDAEVLLRVHTEQVRCKSGNKFFSMPLK 265
                                    88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4H7W)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4H7W)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4H7W)

(-) Gene Ontology  (10, 10)

Asymmetric/Biological Unit(hide GO term definitions)

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