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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN CYP46A1 P450 WITH BICALUTAMIDE BOUND
 
Authors :  C. D. Stout, I. A. Pikuleva, N. Mast
Date :  08 Jun 12  (Deposition) - 09 Jan 13  (Release) - 22 May 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A
Keywords :  Cytochrome P450, Cyp46A1, Bicalutamide Complex, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  N. Mast, W. Zheng, C. D. Stout, I. A. Pikuleva
Binding Of A Cyano- And Fluoro-Containing Drug Bicalutamide To Cytochrome P450 46A1: Unusual Features And Spectral Response.
J. Biol. Chem. V. 288 4613 2013
PubMed-ID: 23288837  |  Reference-DOI: 10.1074/JBC.M112.438754

(-) Compounds

Molecule 1 - CHOLESTEROL 24-HYDROXYLASE
    ChainsA
    EC Number1.14.13.98
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPUC18
    Expression System StrainDH5ALPHA
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneCYP46, CYP46A1
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymCH24H, CYTOCHROME P450 46A1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 4)

Asymmetric/Biological Unit (4, 4)
No.NameCountTypeFull Name
10U91Ligand/IonS-BICALUTAMIDE
21981Ligand/IonR-BICALUTAMIDE
3GOL1Ligand/IonGLYCEROL
4HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS A:104 , TYR A:109 , LEU A:125 , VAL A:126 , TRP A:134 , ARG A:138 , PHE A:299 , ALA A:302 , GLY A:303 , THR A:306 , SER A:307 , HIS A:310 , ALA A:367 , THR A:370 , PRO A:429 , PHE A:430 , ARG A:435 , SER A:436 , CYS A:437 , ILE A:438 , GLY A:439 , PHE A:442 , ALA A:443 , 0U9 A:601 , 198 A:602 , HOH A:705 , HOH A:724 , HOH A:769BINDING SITE FOR RESIDUE HEM A 600
2AC2SOFTWAREPHE A:80 , LEU A:112 , ILE A:222 , ARG A:226 , ALA A:302 , THR A:306 , TRP A:368 , GLY A:369 , PHE A:371 , GLU A:472 , ALA A:474 , THR A:475 , HEM A:600 , HOH A:705BINDING SITE FOR RESIDUE 0U9 A 601
3AC3SOFTWAREPHE A:80 , ILE A:222 , ARG A:226 , ALA A:302 , THR A:306 , TRP A:368 , GLY A:369 , PHE A:371 , GLU A:472 , ALA A:474 , THR A:475 , HEM A:600 , HOH A:705BINDING SITE FOR RESIDUE 198 A 602
4AC4SOFTWARETHR A:100 , LYS A:101BINDING SITE FOR RESIDUE GOL A 603

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4FIA)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4FIA)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4FIA)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4FIA)

(-) Exons   (0, 0)

(no "Exon" information available for 4FIA)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:426
                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhh.eeeeee..eeeeee.hhhhhhhhhh......hhhhhhhhhee..ee..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eehhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh....eeeeee...eee..eee...eeeeeehhhhhh...........hhhhhh..............hhhhh..hhhhhhhhhhhhhhhhhhheeeee.......eee...eee....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fia A  57 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQEQATLKPLDPVLCTLRPR 489
                                    66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226 ||    243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483      
                                                                                                                                                                                                     228|                                                                                                                                                                                                                                                             
                                                                                                                                                                                                      236                                                                                                                                                                                                                                                             

   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4FIA)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4FIA)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4FIA)

(-) Gene Ontology  (23, 23)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CP46A_HUMAN | Q9Y6A22q9f 2q9g 3mdm 3mdr 3mdt 3mdv 4enh 4j14

(-) Related Entries Specified in the PDB File

2q9f CYP46A1 WITH 24-OH CHOLESTEROL