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(-) Description

Title :  CRYSTAL STRUCTURE OF INOSITOL MONOPHOSPHATASE - II FROM STAPHYLOCOCCUS AUREUS MSSA476
 
Authors :  A. Dutta, S. Bhattacharyya, D. Dutta, A. K. Das
Date :  20 Jul 11  (Deposition) - 25 Jul 12  (Release) - 25 Jul 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.59
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Fig Superfamily, Phosphatase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Dutta, S. Bhattacharyya, D. Dutta, A. K. Das
Crystal Structure Of Inositol Monophosphatase - Ii From Staphylococcus Aureus Mssa476
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - INOSITOL MONOPHOSPHATASE FAMILY PROTEIN
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PQE30
    Expression System Strain: M15
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: SAS1042
    Organism Scientific: STAPHYLOCOCCUS AUREUS
    Organism Taxid: 282459
    Strain: MSSA476
    Synonym: IMPASE II

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 10)

Asymmetric/Biological Unit (2, 10)
No.NameCountTypeFull Name
1PG46Ligand/IonTETRAETHYLENE GLYCOL
2PO44Ligand/IonPHOSPHATE ION

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN A:155 , GLY A:182 , SER A:183 , GLU A:187 , TYR A:199 , PG4 A:279 , HOH A:301 , HOH A:335BINDING SITE FOR RESIDUE PO4 A 276
02AC2SOFTWARETYR A:124 , ARG A:134 , SER A:190 , THR A:193 , ASN A:195 , HOH A:359 , HOH A:360 , GLU B:96BINDING SITE FOR RESIDUE PG4 A 277
03AC3SOFTWAREARG A:203 , LEU A:265 , ARG A:269BINDING SITE FOR RESIDUE PG4 A 278
04AC4SOFTWAREASP A:86 , GLY A:182 , SER A:183 , ALA A:184 , PO4 A:276 , HOH A:295 , ARG B:176 , SER B:177 , ARG B:179BINDING SITE FOR RESIDUE PG4 A 279
05AC5SOFTWAREASN B:155 , GLY B:182 , SER B:183 , GLU B:187 , TYR B:199 , HOH B:280 , HOH B:295BINDING SITE FOR RESIDUE PO4 B 276
06AC6SOFTWAREGLU A:96 , TYR B:124 , ARG B:134 , SER B:190 , THR B:193 , ASN B:195BINDING SITE FOR RESIDUE PG4 B 277
07AC7SOFTWAREASN C:155 , GLY C:182 , SER C:183 , GLU C:187 , TYR C:199 , HOH C:345 , HOH C:350BINDING SITE FOR RESIDUE PO4 C 276
08AC8SOFTWAREASN D:155 , GLY D:182 , SER D:183 , GLU D:187 , TYR D:199 , HOH D:279 , HOH D:344 , HOH D:345BINDING SITE FOR RESIDUE PO4 D 276
09AC9SOFTWAREGLU C:96 , TYR D:124 , ARG D:134 , LEU D:186 , SER D:190 , THR D:193 , ASN D:195 , PG4 D:278 , HOH D:293BINDING SITE FOR RESIDUE PG4 D 277
10BC1SOFTWAREASN C:97 , ASN C:195 , ASN D:97 , TYR D:181 , SER D:190 , ASN D:195 , PG4 D:277BINDING SITE FOR RESIDUE PG4 D 278

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3T0J)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1Gln B:264 -Leu B:265
2Glu D:23 -Gln D:24
3Val D:241 -Gly D:242

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3T0J)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3T0J)

(-) Exons   (0, 0)

(no "Exon" information available for 3T0J)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:266
                                                                                                                                                                                                                                                                                                          
               SCOP domains d3t0ja_ A: automated matches                                                                                                                                                                                                                                               SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh...eeee.............eeeeeeeeehhhhhhhhh...eeeeeeee..eeeeeeeee....eeeeee....eee..ee............eee.hhhhhhh.hhhhhhhhhhhhh.eee...hhhhhhhhhhh....eeeeeeehhhhhhhhhhhhhhh..eee............eeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3t0j A   1 MALYGFAQGLIQEAGIRIKQLMEQNLTPNDLVTNVDKATEDFIFDTILETYPNHQVLGEEGHGHDIDTSKGTVWVVDPIDGTLNFVHQQENFAISIGIYIDGKPYAGFVYDVMADVLYHAKVGEGAYRGSQPLKPLNDSNLRQSIIGINPNWLTKPILGEIFKEIVNDSRSARAYGSAALEIVSVATGNLEAYMTPRLQPWDFAGGLVILYEVNGQASNLLGEPLTISGPNSILVGNRGLHQEISNDYLEPHHDALIQLHEQRFKR 272
                                    10        20      ||36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266      
                                                     27|                                                                                                                                                                                                                                              
                                                      34                                                                                                                                                                                                                                              


Chain B from PDB  Type:PROTEIN  Length:260
                                                                                                                                                                                                                                                                                                    
               SCOP domains d3t0jb_ B: automated matches                                                                                                                                                                                                                                         SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh...eeee.............eeeeeeeeehhhhhhhhh...eeeeeeee..eeeeeeeee....eeeeee....eee..ee.......hhhh.eee.hhhhhhh.hhhhhhhhhhhhh.eee...hhhhhhhhhhh....eeeeeeehhhhhhhhhhhhhhh..eee............eeeeeehhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3t0j B   0 SMALYGFAQGLIQEAGIRIKQLMEQNLNPNDLVTNVDKATEDFIFDTILETYPNHQVLGEEGHGHDIDTSKGTVWVVDPIDGTLNFVHQQENFAISIGIYIDGKPYAGFVYDVMADVLYHAKVGEGAYRGSQPLKPLNDSNLRQSIIGINPNWLTKPILGEIFKEIVNDSRSARAYGSAALEIVSVATGNLEAYMTPRLQPWDFAGGLVILYEVNGQASNLLGEPLTISGPNSILVGNRGLHQEISNDYLEPHHDALIQL 265
                                     9        19      ||35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265
                                                     26|                                                                                                                                                                                                                                        
                                                      33                                                                                                                                                                                                                                        


Chain C from PDB  Type:PROTEIN  Length:265
                                                                                                                                                                                                                                                                                                         
               SCOP domains d3t0jc_ C: automated matches                                                                                                                                                                                                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh...eeee.............eeeeeeeeehhhhhhhh....eeeeeeee..eeeeeeeee....eeeeee....eee..ee.......hhhh.eee.hhhhhhh.hhhhhhhhhhhhh.eee...hhhhhhhhhhh....eeeeeeehhhhhhhhhhhhhhh..eee............eeeeee...hhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3t0j C   0 SMALYGFAQGLIQEAGIRIKQLMEQNLTNDLVTNVDKATEDFIFDTILETYPNHQVLGEEGHGHDIDTSKGTVWVVDPIDGTLNFVHQQENFAISIGIYIDGKPYAGFVYDVMADVLYHAKVGEGAYRGSQPLKPLNDSNLRQSIIGINPNWLTKPILGEIFKEIVNDSRSARAYGSAALEIVSVATGNLEAYMTPRLQPWDFAGGLVILYEVNGQASNLLGEPLTISGPNSILVGNRGLHQEISNDYLEPHHDALIQLHEQRFK 271
                                     9        19       |36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266     
                                                      27|                                                                                                                                                                                                                                            
                                                       35                                                                                                                                                                                                                                            


Chain D from PDB  Type:PROTEIN  Length:257
                                                                                                                                                                                                                                                                                                 
               SCOP domains d3t0jd_ D: automated matches                                                                                                                                                                                                                                      SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh...eeee.............eeeeeeeeehhhhhhhhh...eeeeeeee..eeeeeeeee....eeeeee....eee..ee.......hhhh.eee.hhhhh....hhhhhhhhhhhh.eee...hhhhhhhhhhh....eeeeeeehhhhhhhhhhhhhhh...ee............eeeee.hhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3t0j D   1 MALYGFAQGLIQEAGIRIKQLMEQNLNDLVTNVDKATEDFIFDTILETYPNHQVLGEEGHGHDIDTSKGTVWVVDPIDGTLNFVHQQENFAISIGIYIDGKPYAGFVYDVMADVLYHAKVGEGAYRGSQPLKPLNDSNLRQSIIGINPNWLTKPILGEIFKEIVNDSRSARAYGSAALEIVSVATGNLEAYMTPRLQPWDFAGGLVILYEVNGQASNLLGEPLTISGPNSILVGNRGLHQEISNDYLEPHHDALIQL 265
                                    10        20     || 38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       
                                                    26|                                                                                                                                                                                                                                      
                                                     35
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric/Biological Unit
(-)
Class: Multi-domain proteins (alpha and beta) (2421)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3T0J)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3T0J)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 3T0J)

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  Cis Peptide Bonds
    Gln B:264 - Leu B:265   [ RasMol ]  
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    Val D:241 - Gly D:242   [ RasMol ]  
 

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