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(-) Description

Title :  CRYSTAL STRUCTURE OF SULFOTRANSFERASE FROM ALICYCLOBACILLUS ACIDOCALDARIUS
 
Authors :  Y. Kim, G. Chhor, J. Bearden, A. Joachimiak, Midwest Center For Stru Genomics (Mcsg)
Date :  22 Apr 11  (Deposition) - 29 Jun 11  (Release) - 29 Jun 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.75
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics, Psi-Biology, Midwest Center For Structural Genomics, Mcsg, Alpha-Beta-Alpha Sandwich, Transferase, Cytosol (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Kim, G. Chhor, J. Bearden, A. Joachimiak
Crystal Structure Of Sulfotransferase From Alicyclobacillus Acidocaldarius
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - SULFOTRANSFERASE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BM21 MAGIC
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: AACI_0638
    Organism Scientific: ALICYCLOBACILLUS ACIDOCALDARIUS SUBSP. ACIDOCALDARIUS
    Organism Taxid: 521098
    Strain: DSM 446

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 11)

Asymmetric/Biological Unit (3, 11)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2MG2Ligand/IonMAGNESIUM ION
3MSE7Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:26 , HIS A:28 , ILE A:31 , HOH A:376 , HOH A:436 , HOH A:438BINDING SITE FOR RESIDUE MG A 311
2AC2SOFTWAREASP A:173 , HOH A:477 , HOH A:536 , HOH A:537 , HOH A:538 , HOH A:543BINDING SITE FOR RESIDUE MG A 312
3AC3SOFTWAREGLU A:38 , PHE A:89 , GLU A:153 , LEU A:155 , HOH A:401 , HOH A:567BINDING SITE FOR RESIDUE GOL A 313
4AC4SOFTWARELYS A:181 , VAL A:182 , ILE A:183 , LEU A:184 , GLU A:187 , ASP A:198 , ARG A:293BINDING SITE FOR RESIDUE GOL A 314

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3RNL)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Gly A:12 -Ala A:13

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3RNL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3RNL)

(-) Exons   (0, 0)

(no "Exon" information available for 3RNL)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:247
 aligned with C8WTE4_ALIAD | C8WTE4 from UniProtKB/TrEMBL  Length:308

    Alignment length:298
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292        
         C8WTE4_ALIAD     3 VARPNFFIVGAAKCGTSSLDRYLSQHPDIYIPPKKEAHFFSIPDFPERFTGPGDEGMNLYTIRDEDAYMRLFDGVRGERAVGEASVFYLFYPGTAQRMYDAYPDAKILIMLRNPVDRAFSAYMHLVRDERETLSFRESLAKEEERIRQHYEPLWYYRAVGLYAAQVKRYLDVFGREQVKVILFEEFARDPVQVVRDCCAFLGVSTDFVPDTSIRHNESGVPKSRSLYNFIAKPNALKEIVKPFIPAAVRERLGNRAKSMVLGRMEMEPDLREELTAFFAPDVARLEALIHRDLSAWRR 300
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------Sulfotransfer_1-3rnlA01 A:91-288                                                                                                                                                                      ------------ Pfam domains
         Sec.struct. author .....eee......hhhhhhhhhhh...ee.......hhhhhhhh........hhhhhhh...hhhhhhhh........eeeee........hhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhh...eeeeehhhhhhhhhhhhhhhhhhhh..........---------------------------------------------------...hhhhhhhhhhhhhhhhhhhhhhhh..hhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rnl A   3 VARPNFFIVGAAKCGTSSLDRYLSQHPDIYIPPKKEAHFFSIPDFPERFTGPGDEGmNLYTIRDEDAYmRLFDGVRGERAVGEASVFYLFYPGTAQRmYDAYPDAKILImLRNPVDRAFSAYmHLVRDERETLSFRESLAKEEERIRQHYEPLWYYRAVGLYAAQVKRYLDVFGREQVKVILFEEFARDPVQVVRDCCAFLGVSTDFVPDTS---------------------------------------------------mEmEPDLREELTAFFAPDVARLEALIHRDLSAWRR 300
                                    12        22        32        42        52      | 62        72        82        92       102       112       122  |    132       142       152       162       172       182       192       202       212 |       -         -         -         -         -   | | 272       282       292        
                                                                                   59-MSE      71-MSE                      100-MSE     112-MSE      125-MSE                                                                                  214                                                 266-MSE                              
                                                                                                                                                                                                                                                                                                   268-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3RNL)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3RNL)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: P-loop_NTPase (1112)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (C8WTE4_ALIAD | C8WTE4)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

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    Gly A:12 - Ala A:13   [ RasMol ]  
 

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