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(-) Description

Title :  CRYSTAL STRUCTURE OF MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME-LIKE PROTEIN FROM ROSEOVARIUS SP. TM1035
 
Authors :  V. N. Malashkevich, R. Toro, R. Seidel, S. Garrett, R. Foti, S. C. Almo, N Structural Genomics Research Consortium (Nysgrc)
Date :  31 Mar 11  (Deposition) - 18 May 11  (Release) - 18 May 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.99
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H
Keywords :  Structural Genomics, Protein Structure Initiative, New York Structural Genomics Research Consortium, Nysgrc, Psi-Biology, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  V. N. Malashkevich, R. Toro, R. Seidel, S. Garrett, R. Foti, S. C. Almo
Crystal Structure Of Mandelate Racemase/Muconate Lactonizin Enzyme-Like Protein From Roseovarius Sp. Tm1035
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME-LIKE PROTEIN
    Chains: A, B, C, D, E, F, G, H
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: BC-PSGX3(BC)
    Expression System Strain: BL21(DE3)CODON+RIL
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: 149202287, RTM1035_13208
    Organism Scientific: ROSEOVARIUS SP. TM1035
    Organism Taxid: 391613
    Strain: TM1035

 Structural Features

(-) Chains, Units

  12345678
Asymmetric/Biological Unit : ABCDEFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 34)

Asymmetric/Biological Unit (3, 34)
No.NameCountTypeFull Name
1GOL18Ligand/IonGLYCEROL
2MG8Ligand/IonMAGNESIUM ION
3RIB8Ligand/IonRIBOSE

(-) Sites  (34, 34)

Asymmetric Unit (34, 34)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:234 , GLU A:260 , HOH A:498 , HOH A:578 , HOH A:800 , HOH A:1005BINDING SITE FOR RESIDUE MG A 500
02AC2SOFTWAREGLU C:68 , TRP C:102 , ARG C:109 , ALA E:115 , GLY E:118 , GLY E:119BINDING SITE FOR RESIDUE GOL E 501
03AC3SOFTWAREALA A:181 , MET A:182 , THR A:183 , TYR A:395 , HOH A:2392 , ARG E:126 , THR E:162 , ASP E:201 , LYS E:202 , ASP E:204BINDING SITE FOR RESIDUE GOL A 502
04AC4SOFTWAREALA A:115 , LEU A:116 , GLY A:118 , GLY A:119 , GLU D:68 , TRP D:102 , ARG D:109 , LEU D:116 , HOH D:490BINDING SITE FOR RESIDUE GOL A 503
05AC5SOFTWAREARG A:85 , PRO A:86 , ALA A:266 , GLU A:267 , PRO C:239 , ASP C:240 , VAL C:242 , GLU C:267 , HOH C:2206BINDING SITE FOR RESIDUE RIB A 505
06AC6SOFTWAREGLU B:234 , GLU B:260 , HOH B:508 , HOH B:658 , HOH B:735 , HOH B:1923BINDING SITE FOR RESIDUE MG B 500
07AC7SOFTWAREGLU B:68 , TRP B:102 , ARG B:109 , ALA H:115 , GLY H:118 , GLY H:119 , HOH H:435BINDING SITE FOR RESIDUE GOL H 501
08AC8SOFTWARETHR A:162 , ASP A:201 , LYS A:202 , ASP A:204 , ALA B:181 , MET B:182 , THR B:183 , TYR B:395 , HOH B:2253BINDING SITE FOR RESIDUE GOL B 502
09AC9SOFTWAREARG B:85 , PRO B:86 , ALA B:266 , HOH B:2422 , PRO D:239 , ASP D:240 , VAL D:242 , LEU D:262 , GLU D:267 , HOH D:1971BINDING SITE FOR RESIDUE RIB B 505
10BC1SOFTWAREGLU C:234 , GLU C:260 , HOH C:474 , HOH C:687 , HOH C:842 , HOH C:999BINDING SITE FOR RESIDUE MG C 500
11BC2SOFTWAREALA C:181 , MET C:182 , THR C:183 , TYR C:395 , ARG D:126 , THR D:162 , ASP D:201 , LYS D:202 , ASP D:204BINDING SITE FOR RESIDUE GOL C 502
12BC3SOFTWAREARG C:126 , THR C:162 , ASP C:201 , LYS C:202 , ASP C:204 , ALA G:181 , MET G:182 , THR G:183 , TYR G:395BINDING SITE FOR RESIDUE GOL G 503
13BC4SOFTWAREPRO A:239 , ASP A:240 , VAL A:242 , LEU A:262 , GLU A:267 , HOH A:614 , HOH A:802 , HOH A:2399 , ARG C:85 , PRO C:86 , ALA C:266BINDING SITE FOR RESIDUE RIB A 433
14BC5SOFTWAREGLU D:234 , GLU D:260 , HOH D:475 , HOH D:727 , HOH D:1930 , HOH D:1939BINDING SITE FOR RESIDUE MG D 500
15BC6SOFTWAREGLU A:68 , TRP A:102 , ARG A:109 , ALA D:115 , GLY D:118 , GLY D:119 , HOH D:490BINDING SITE FOR RESIDUE GOL D 501
16BC7SOFTWAREALA D:181 , MET D:182 , THR D:183 , TYR D:395 , HOH D:2185 , ARG H:126 , THR H:162 , ASP H:201 , LYS H:202 , ASP H:204BINDING SITE FOR RESIDUE GOL D 502
17BC8SOFTWAREPRO B:239 , ASP B:240 , VAL B:242 , LEU B:262 , GLU B:267 , HOH B:935 , ARG D:85 , PRO D:86 , ALA D:266 , HOH D:2174BINDING SITE FOR RESIDUE RIB D 505
18BC9SOFTWAREGLU E:234 , GLU E:260 , HOH E:458 , HOH E:962 , HOH E:1083 , HOH E:2792BINDING SITE FOR RESIDUE MG E 500
19CC1SOFTWAREALA C:115 , LEU C:116 , GLY C:118 , GLY C:119 , HOH C:487 , GLU E:68 , TRP E:102 , ARG E:109BINDING SITE FOR RESIDUE GOL C 501
20CC2SOFTWAREARG E:85 , PRO E:86 , ALA E:266 , GLU E:267 , HOH E:1063 , PRO G:239 , ASP G:240 , GLU G:267 , RIB G:505BINDING SITE FOR RESIDUE RIB E 505
21CC3SOFTWAREGLU F:234 , GLU F:260 , HOH F:690 , HOH F:1031 , HOH F:1039 , HOH F:1315BINDING SITE FOR RESIDUE MG F 500
22CC4SOFTWAREARG F:273 , TYR F:303 , ALA G:269 , ARG G:273 , TYR G:303BINDING SITE FOR RESIDUE GOL G 501
23CC5SOFTWAREALA E:181 , MET E:182 , THR E:183 , TYR E:395 , ARG F:126 , THR F:162 , ASP F:201 , LYS F:202 , ASP F:204BINDING SITE FOR RESIDUE GOL E 502
24CC6SOFTWARETHR B:162 , ASP B:201 , LYS B:202 , ASP B:204 , ALA F:181 , MET F:182 , THR F:183 , TYR F:395 , HOH F:3010BINDING SITE FOR RESIDUE GOL B 503
25CC7SOFTWAREARG F:85 , PRO F:86 , ALA F:266 , GLU F:267 , PRO H:239 , ASP H:240 , VAL H:242 , GLU H:267 , RIB H:433 , HOH H:576BINDING SITE FOR RESIDUE RIB H 505
26CC8SOFTWAREGLU G:234 , GLU G:260 , HOH G:468 , HOH G:975 , HOH G:1053 , HOH G:1061BINDING SITE FOR RESIDUE MG G 500
27CC9SOFTWAREALA F:115 , LEU F:116 , GLY F:118 , GLY F:119 , GLU G:68 , TRP G:102 , ARG G:109 , LEU G:116BINDING SITE FOR RESIDUE GOL F 501
28DC1SOFTWARETHR G:162 , ASP G:201 , LYS G:202 , ASP G:204 , ALA H:181 , MET H:182 , THR H:183 , TYR H:395 , HOH H:2480BINDING SITE FOR RESIDUE GOL G 502
29DC2SOFTWAREGLU F:68 , TRP F:102 , ARG F:109 , LEU F:116 , ALA G:115 , LEU G:116 , GLY G:118 , GLY G:119BINDING SITE FOR RESIDUE GOL G 504
30DC3SOFTWAREPRO E:239 , ASP E:240 , VAL E:242 , GLU E:267 , RIB E:505 , ARG G:85 , PRO G:86 , ALA G:266 , GLU G:267 , HOH G:2468BINDING SITE FOR RESIDUE RIB G 505
31DC4SOFTWAREGLU H:234 , GLU H:260 , HOH H:459 , HOH H:506 , HOH H:529 , HOH H:595BINDING SITE FOR RESIDUE MG H 500
32DC5SOFTWAREGLN D:247 , HOH D:1222 , ALA H:249 , GLY H:275 , HOH H:457BINDING SITE FOR RESIDUE GOL D 433
33DC6SOFTWAREALA B:115 , LEU B:116 , GLY B:118 , GLY B:119 , GLU H:68 , TRP H:102 , ARG H:109 , LEU H:116 , HOH H:435BINDING SITE FOR RESIDUE GOL B 433
34DC7SOFTWAREPRO F:239 , ASP F:240 , GLU F:267 , HOH F:1697 , ARG H:85 , PRO H:86 , ALA H:266 , GLU H:267 , RIB H:505BINDING SITE FOR RESIDUE RIB H 433

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3RCY)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric/Biological Unit
No.Residues
1Ala A:15 -Pro A:16
2Ala B:15 -Pro B:16
3Ala C:15 -Pro C:16
4Ala D:15 -Pro D:16
5Ala E:15 -Pro E:16
6Ala F:15 -Pro F:16
7Ala G:15 -Pro G:16
8Ala H:15 -Pro H:16

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3RCY)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3RCY)

(-) Exons   (0, 0)

(no "Exon" information available for 3RCY)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:396
 aligned with A6DZ31_9RHOB | A6DZ31 from UniProtKB/TrEMBL  Length:410

    Alignment length:396
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390      
         A6DZ31_9RHOB     1 MKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDYT 396
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeee...........eeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eeeeee.......hhhhhh.hhhhhhhhhhhhhhh...eeee..............hhhhhhhhhhhhhhhhhhhh...eeee......hhhhhhhhhhhhhhhh..eee......hhhhhhhhhhhh...eee.....hhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhh...ee......hhhhhhhhhhhhhh......ee...hhhhhhhh.....ee..ee............hhhhhhh.................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3rcy A   1 VKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDYT 396
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390      


Chain B from PDB  Type:PROTEIN  Length:395
 aligned with A6DZ31_9RHOB | A6DZ31 from UniProtKB/TrEMBL  Length:410

    Alignment length:395
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390     
         A6DZ31_9RHOB     1 MKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDY 395
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee...........eeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eeeeee.......hhhhhh.hhhhhhhhhhhhhhh...eeee..............hhhhhhhhhhhhhhhhhhhhhhheeee......hhhhhhhhhhhhhhhh..eee......hhhhhhhhhhhh...eee.....hhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhh...ee......hhhhhhhhhhhhhh......ee...hhhhhhhh.....ee..ee............hhhhhhh................... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rcy B   1 VKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDY 395
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390     


Chain C from PDB  Type:PROTEIN  Length:396
 aligned with A6DZ31_9RHOB | A6DZ31 from UniProtKB/TrEMBL  Length:410

    Alignment length:396
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390      
         A6DZ31_9RHOB     1 MKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDYT 396
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeee...........eeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eeeeee.......hhhhhh.hhhhhhhhhhhhhhh...eeee..............hhhhhhhhhhhhhhhhhhhh...eeee......hhhhhhhhhhhhhhhh..eee......hhhhhhhhhhhh...eee.....hhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhh...ee......hhhhhhhhhhhhhh......ee...hhhhhhhh.....ee..ee............hhhhhhhh................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3rcy C   1 VKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDYT 396
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390      


Chain D from PDB  Type:PROTEIN  Length:396
 aligned with A6DZ31_9RHOB | A6DZ31 from UniProtKB/TrEMBL  Length:410

    Alignment length:396
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390      
         A6DZ31_9RHOB     1 MKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDYT 396
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeee...........eeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eeeeee.......hhhhhh.hhhhhhhhhhhhhhh...eeee..............hhhhhhhhhhhhhhhhhhhh...eeee......hhhhhhhhhhhhhhhh..eee......hhhhhhhhhhhh...eee.....hhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhh...ee......hhhhhhhhhhhhhh......ee...hhhhhhhh.....ee..ee............hhhhhhh.................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3rcy D   1 VKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDYT 396
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390      


Chain E from PDB  Type:PROTEIN  Length:395
 aligned with A6DZ31_9RHOB | A6DZ31 from UniProtKB/TrEMBL  Length:410

    Alignment length:395
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390     
         A6DZ31_9RHOB     1 MKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDY 395
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee...........eeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eeeeee.......hhhhhh.hhhhhhhhhhhhhhh...eeee..............hhhhhhhhhhhhhhhhhhhhhhheeee......hhhhhhhhhhhhhhhh..eee......hhhhhhhhhhhh...eee.....hhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhh...ee......hhhhhhhhhhhhhh......ee...hhhhhhhh.....ee..ee............hhhhhhh................... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rcy E   1 VKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDY 395
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390     


Chain F from PDB  Type:PROTEIN  Length:397
 aligned with A6DZ31_9RHOB | A6DZ31 from UniProtKB/TrEMBL  Length:410

    Alignment length:397
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       
         A6DZ31_9RHOB     1 MKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDYTN 397
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee...........eeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eeeeee.......hhhhhh.hhhhhhhhhhhhhhh...eeee..............hhhhhhhhhhhhhhhhhhhh...eeee......hhhhhhhhhhhhhhhh..eee......hhhhhhhhhhhh...eee.....hhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhh...ee......hhhhhhhhhhhhhhh.....ee...hhhhhhhh.....ee..ee............hhhhhhh..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rcy F   1 VKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDYTN 397
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       


Chain G from PDB  Type:PROTEIN  Length:396
 aligned with A6DZ31_9RHOB | A6DZ31 from UniProtKB/TrEMBL  Length:410

    Alignment length:396
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390      
         A6DZ31_9RHOB     1 MKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDYT 396
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeee...........eeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eeeeee.......hhhhhh.hhhhhhhhhhhhhhh...eeee..............hhhhhhhhhhhhhhhhhhhh...eeee......hhhhhhhhhhhhhhhh..eee......hhhhhhhhhhhh...eee.....hhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhh...ee......hhhhhhhhhhhhhh......ee...hhhhhhhh.....ee..ee............hhhhhhh.................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3rcy G   1 VKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDYT 396
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390      


Chain H from PDB  Type:PROTEIN  Length:395
 aligned with A6DZ31_9RHOB | A6DZ31 from UniProtKB/TrEMBL  Length:410

    Alignment length:395
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390     
         A6DZ31_9RHOB     1 MKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDY 395
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ------------------MR_MLE_N-3rcyH01 H:19-118                                                                           ------------------------------------------------------------------------MR_MLE-3rcyH09 H:191-259                                             ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) ------------------MR_MLE_N-3rcyH02 H:19-118                                                                           ------------------------------------------------------------------------MR_MLE-3rcyH10 H:191-259                                             ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) ------------------MR_MLE_N-3rcyH03 H:19-118                                                                           ------------------------------------------------------------------------MR_MLE-3rcyH11 H:191-259                                             ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) ------------------MR_MLE_N-3rcyH04 H:19-118                                                                           ------------------------------------------------------------------------MR_MLE-3rcyH12 H:191-259                                             ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (4)
           Pfam domains (5) ------------------MR_MLE_N-3rcyH05 H:19-118                                                                           ------------------------------------------------------------------------MR_MLE-3rcyH13 H:191-259                                             ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (5)
           Pfam domains (6) ------------------MR_MLE_N-3rcyH06 H:19-118                                                                           ------------------------------------------------------------------------MR_MLE-3rcyH14 H:191-259                                             ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (6)
           Pfam domains (7) ------------------MR_MLE_N-3rcyH07 H:19-118                                                                           ------------------------------------------------------------------------MR_MLE-3rcyH15 H:191-259                                             ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (7)
           Pfam domains (8) ------------------MR_MLE_N-3rcyH08 H:19-118                                                                           ------------------------------------------------------------------------MR_MLE-3rcyH16 H:191-259                                             ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (8)
         Sec.struct. author ..eeeeeeeee...........eeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eeeeee.......hhhhhh.hhhhhhhhhhhhhhh...eeee..............hhhhhhhhhhhhhhhhhhhh...eeee......hhhhhhhhhhhhhhhh..eee......hhhhhhhhhhhh...eee.....hhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhh...ee......hhhhhhhhhhhhhh......ee...hhhhhhhh.....ee..ee............hhhhhhhh.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rcy H   1 VKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGITGWGECYAASVGPEAMRAVIEDVFARHMEGENPENIELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLYAGPVEWAANVHFAASIPNILMCESIETPFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALARANPYHGTGLHLEMQEASCDY 395
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3RCY)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3RCY)

(-) Pfam Domains  (2, 16)

Asymmetric/Biological Unit
(-)
Clan: Enolase_N (69)
(-)
Clan: Enolase_TIM (82)
(-)
Family: MR_MLE (48)
(-)
Roseovarius sp. TM1035 (1)
2aMR_MLE-3rcyH09H:191-259
2bMR_MLE-3rcyH10H:191-259
2cMR_MLE-3rcyH11H:191-259
2dMR_MLE-3rcyH12H:191-259
2eMR_MLE-3rcyH13H:191-259
2fMR_MLE-3rcyH14H:191-259
2gMR_MLE-3rcyH15H:191-259
2hMR_MLE-3rcyH16H:191-259

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (A6DZ31_9RHOB | A6DZ31)
molecular function
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

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