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(-) Description

Title :  1.6 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF PUTATIVE STREPTOTHRICIN ACETYLTRANSFERASE FROM BACILLUS ANTHRACIS STR. AMES IN COMPLEX WITH ACETYL COENZYME A
 
Authors :  A. S. Halavaty, Z. Wawrzak, O. Onopriyenko, A. Edwards, A. Savchenko, S. Peterson, W. F. Anderson, Center For Structural Genomics Of I Diseases (Csgid)
Date :  24 Nov 10  (Deposition) - 12 Jan 11  (Release) - 12 Jan 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym. Unit :  A,B,C
Biol. Unit 1:  A  (2x)
Biol. Unit 2:  B,C  (1x)
Keywords :  Putative Streptothricin Acetyltransferase, Toxin Production And Resistance, Infectious Diseases, Structural Genomics, Center For Structural Genomics Of Infectious Diseases (Csgid), Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. S. Halavaty, Z. Wawrzak, O. Onopriyenko, A. Edwards, A. Savchenko, S. Peterson, W. F. Anderson, Center For Structural Genomics Of Infectious Diseases (Csgid)
1. 6 Angstrom Resolution Crystal Structure Of Putative Streptothricin Acetyltransferase From Bacillus Anthracis Str. Ames In Complex With Acetyl Coenzyme A
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE STREPTOTHRICIN ACETYLTRANSFERASE
    ChainsA, B, C
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPMCSG7
    Expression System StrainBL21-CODONPLUS(DE3)-RIPL
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneBAS2961, BA_3185, GBAA3185, GBAA_3185
    Organism CommonANTHRAX,ANTHRAX BACTERIUM
    Organism ScientificBACILLUS ANTHRACIS
    Organism Taxid198094
    StrainAMES

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit ABC
Biological Unit 1 (2x)A  
Biological Unit 2 (1x) BC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 23)

Asymmetric Unit (4, 23)
No.NameCountTypeFull Name
1ACO3Ligand/IonACETYL COENZYME *A
2K2Ligand/IonPOTASSIUM ION
3MSE13Mod. Amino AcidSELENOMETHIONINE
4PO45Ligand/IonPHOSPHATE ION
Biological Unit 1 (3, 12)
No.NameCountTypeFull Name
1ACO2Ligand/IonACETYL COENZYME *A
2K-1Ligand/IonPOTASSIUM ION
3MSE8Mod. Amino AcidSELENOMETHIONINE
4PO42Ligand/IonPHOSPHATE ION
Biological Unit 2 (3, 15)
No.NameCountTypeFull Name
1ACO2Ligand/IonACETYL COENZYME *A
2K-1Ligand/IonPOTASSIUM ION
3MSE9Mod. Amino AcidSELENOMETHIONINE
4PO44Ligand/IonPHOSPHATE ION

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETYR A:54 , ILE A:100 , ASP A:102 , ILE A:103 , THR A:104 , VAL A:105 , ARG A:110 , THR A:111 , LEU A:112 , GLY A:113 , VAL A:114 , GLY A:115 , LYS A:116 , GLU A:137 , ASN A:142 , ALA A:144 , LYS A:147 , PHE A:148 , TYR A:149 , LYS A:151 , HOH A:188 , HOH A:191 , HOH A:207 , HOH A:219 , HOH A:227 , HOH A:276 , HOH A:345 , HOH A:372BINDING SITE FOR RESIDUE ACO A 185
02AC2SOFTWAREASN A:93 , TRP A:94 , MSE A:135 , HOH A:312BINDING SITE FOR RESIDUE PO4 A 186
03AC3SOFTWARETHR A:138 , GLN A:139 , ASN A:142 , HOH A:205BINDING SITE FOR RESIDUE K A 187
04AC4SOFTWAREILE B:100 , ASP B:102 , ILE B:103 , THR B:104 , VAL B:105 , ARG B:110 , THR B:111 , LEU B:112 , GLY B:113 , VAL B:114 , GLY B:115 , LYS B:116 , GLU B:137 , ASN B:142 , ALA B:144 , LYS B:147 , PHE B:148 , TYR B:149 , LYS B:151 , HOH B:190 , HOH B:197 , HOH B:198 , HOH B:203 , HOH B:299 , HOH B:300BINDING SITE FOR RESIDUE ACO B 185
05AC5SOFTWAREASN B:93 , TRP B:94 , MSE B:135 , HOH B:261 , HOH B:339 , HOH C:235 , HOH C:361BINDING SITE FOR RESIDUE PO4 B 186
06AC6SOFTWARELYS B:123 , LYS B:127 , HIS B:181 , PHE B:182 , ASP B:183BINDING SITE FOR RESIDUE PO4 B 187
07AC7SOFTWAREASP C:21 , TYR C:54 , ILE C:100 , ASP C:102 , ILE C:103 , THR C:104 , VAL C:105 , ARG C:110 , THR C:111 , LEU C:112 , GLY C:113 , VAL C:114 , GLY C:115 , LYS C:116 , GLU C:137 , ASN C:142 , ALA C:144 , LYS C:147 , PHE C:148 , TYR C:149 , LYS C:151 , HOH C:190 , HOH C:194 , HOH C:195 , HOH C:197 , HOH C:198 , HOH C:199 , HOH C:200 , HOH C:208 , HOH C:213 , HOH C:215 , HOH C:225 , HOH C:278 , HOH C:367BINDING SITE FOR RESIDUE ACO C 185
08AC8SOFTWAREASN C:93 , TRP C:94 , MSE C:135 , HOH C:361BINDING SITE FOR RESIDUE PO4 C 186
09AC9SOFTWARELYS C:123 , LYS C:127 , PHE C:182 , ASP C:183BINDING SITE FOR RESIDUE PO4 C 187
10BC1SOFTWARETYR C:54 , THR C:138 , GLN C:139 , ASN C:142BINDING SITE FOR RESIDUE K C 188

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3PP9)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3PP9)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3PP9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3PP9)

(-) Exons   (0, 0)

(no "Exon" information available for 3PP9)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:176
 aligned with Q81NK7_BACAN | Q81NK7 from UniProtKB/TrEMBL  Length:184

    Alignment length:181
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181 
         Q81NK7_BACAN     2 SLLIRELETNDLDNFPEIDDSFIVNARLMLSLSKVNRRIEYTVEDVPSYEKSYLQNDNEELVYNEYINKPNQIIYIALLHNQIIGFIVLKKNWNNYAYIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNMPGIMLETQNNNVAACKFYEKCGFVIGGFDFLVYKGLNMTSDEVAIYWYLHF 182
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee.hhhhh........eeeeeeeeeeee......eeeeeeeeeeeeee..-----..hhhhhh....eeeeeeee..eeeeeeeeee.....eeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh..eeeeee.hhhhhh.......eeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3pp9 A   2 SLLIRELETNDLDNFPEIDDSFIVNARLmLSLSKVNRRIEYTVEDVPSYEKSYL-----ELVYNEYINKPNQIIYIALLHNQIIGFIVLKKNWNNYAYIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNmPGImLETQNNNVAACKFYEKCGFVIGGFDFLVYKGLNmTSDEVAIYWYLHF 182
                                    11        21        31        41        51   |    61        71        81        91       101       111       121       131   |   141       151       161       171       181 
                                                       30-MSE                   55    61                                                                   131-MSE                               169-MSE         
                                                                                                                                                               135-MSE                                           

Chain B from PDB  Type:PROTEIN  Length:174
 aligned with Q81NK7_BACAN | Q81NK7 from UniProtKB/TrEMBL  Length:184

    Alignment length:185
                              1                                                                                                                                                                                      
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178     
         Q81NK7_BACAN     - --MSLLIRELETNDLDNFPEIDDSFIVNARLMLSLSKVNRRIEYTVEDVPSYEKSYLQNDNEELVYNEYINKPNQIIYIALLHNQIIGFIVLKKNWNNYAYIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNMPGIMLETQNNNVAACKFYEKCGFVIGGFDFLVYKGLNMTSDEVAIYWYLHFD 183
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeee.hhhhh.........eeeeeeeeeee....-.eeeeeeeeeeeee----------hhhhhh....eeeeeeee..eeeeeeeeee.....eeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh..eeeeee.hhhhhh.......eeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3pp9 B  -1 NAmSLLIRELETNDLDNFPEIDDSFIVNARLmLSLSKVN-RIEYTVEDVPSYEK----------VYNEYINKPNQIIYIALLHNQIIGFIVLKKNWNNYAYIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNmPGImLETQNNNVAACKFYEKCGFVIGGFDFLVYKGLNmTSDEVAIYWYLHFD 183
                              |      8        18        28 |      |-|       48   |     -    |   68        78        88        98       108       118       128  |   |138       148       158       168|      178     
                              1-MSE                       30-MSE 37 |           52         63                                                                 131-MSE                               169-MSE          
                                                                   39                                                                                             135-MSE                                            

Chain C from PDB  Type:PROTEIN  Length:173
 aligned with Q81NK7_BACAN | Q81NK7 from UniProtKB/TrEMBL  Length:184

    Alignment length:183
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180   
         Q81NK7_BACAN     1 MSLLIRELETNDLDNFPEIDDSFIVNARLMLSLSKVNRRIEYTVEDVPSYEKSYLQNDNEELVYNEYINKPNQIIYIALLHNQIIGFIVLKKNWNNYAYIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNMPGIMLETQNNNVAACKFYEKCGFVIGGFDFLVYKGLNMTSDEVAIYWYLHFD 183
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -----------------------------------------------------------------------------Acetyltransf_1-3pp9C01 C:78-155                                               ---------------------------- Pfam domains (1)
           Pfam domains (2) -----------------------------------------------------------------------------Acetyltransf_1-3pp9C02 C:78-155                                               ---------------------------- Pfam domains (2)
           Pfam domains (3) -----------------------------------------------------------------------------Acetyltransf_1-3pp9C03 C:78-155                                               ---------------------------- Pfam domains (3)
         Sec.struct. author ...eeee.hhhhhh.......eeeeeeeeeee.-----..eeeeeeeeeeeee..---....hhhhhh....eeeeeeee..eeeeeeeeee.....eeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh..eeeeee.hhhhhh.--....eeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3pp9 C   1 mSLLIRELETNDLDNFPEIDDSFIVNARLmLSL-----RIEYTVEDVPSYEKSYL---NEELVYNEYINKPNQIIYIALLHNQIIGFIVLKKNWNNYAYIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNmPGImLETQNNNVAACKFYEKCGFVIGGFDFLVYKGLN--SDEVAIYWYLHFD 183
                            |       10        20        30  |     40        50    |   60        70        80        90       100       110       120       130|   |  140       150       160       | -|      180   
                            1-MSE                       30-MSE   39              55  59                                                                     131-MSE                              168  |            
                                                                                                                                                                135-MSE                             171            

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3PP9)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3PP9)

(-) Pfam Domains  (1, 3)

Asymmetric Unit

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C   (Q81NK7_BACAN | Q81NK7)
molecular function
    GO:0008080    N-acetyltransferase activity    Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0046677    response to antibiotic    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.

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