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(-) Description

Title :  MOUSE SEMAPHORIN 6A, EXTRACELLULAR DOMAINS 1-2
 
Authors :  B. J. C. Janssen, R. A. Robinson, C. H. Bell, C. Siebold, E. Y. Jones
Date :  25 Aug 10  (Deposition) - 13 Oct 10  (Release) - 02 Feb 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Transmembrane, Ligand, Sema-Domain, Cell-Cell Signalling, Plexin A2, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. J. Janssen, R. A. Robinson, F. Perez-Branguli, C. H. Bell, K. J. Mitchell, C. Siebold, E. Y. Jones
Structural Basis Of Semaphorin-Plexin Signalling.
Nature V. 467 1118 2010
PubMed-ID: 20877282  |  Reference-DOI: 10.1038/NATURE09468

(-) Compounds

Molecule 1 - SEMAPHORIN-6A
    Chains: A, B
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293
    Expression System Common: HUMAN
    Expression System Plasmid: PHLSEC
    Expression System Taxid: 9606
    Gene: SEMA6A, SEMAQ
    Organism Common: MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Synonym: SEMAPHORIN VIA, SEMA VIA, SEMAPHORIN-6A-1, SEMA6A-1, SEMAPHORIN Q, SEMA Q

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 26)

Asymmetric/Biological Unit (5, 26)
No.NameCountTypeFull Name
1BMA1Ligand/IonBETA-D-MANNOSE
2CIT1Ligand/IonCITRIC ACID
3GOL10Ligand/IonGLYCEROL
4MAN2Ligand/IonALPHA-D-MANNOSE
5NAG12Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (26, 26)

Asymmetric Unit (26, 26)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN A:65 , ARG A:66BINDING SITE FOR RESIDUE NAG A 1065
02AC2SOFTWAREARG A:280 , ASN A:282 , SER A:284 , HIS A:290 , TYR A:292 , ASN A:407 , NAG A:1283 , HOH A:3023 , HOH A:3176BINDING SITE FOR RESIDUE NAG A 1282
03AC3SOFTWARENAG A:1282BINDING SITE FOR RESIDUE NAG A 1283
04AC4SOFTWARETYR A:432 , ASN A:434 , NAG A:1435BINDING SITE FOR RESIDUE NAG A 1434
05AC5SOFTWARETYR A:432 , NAG A:1434BINDING SITE FOR RESIDUE NAG A 1435
06AC6SOFTWAREHIS A:54 , ARG A:55 , LYS A:114 , ASP A:115 , HIS A:118 , TRP A:535 , ARG A:537 , GLY A:540 , HOH A:3116BINDING SITE FOR RESIDUE CIT A 2001
07AC7SOFTWAREARG A:73 , ASP A:74 , HIS A:75 , LYS A:98BINDING SITE FOR RESIDUE GOL A 2002
08AC8SOFTWAREMET A:60 , LYS A:122 , VAL A:123 , LEU A:124 , LEU A:125 , ASN A:173 , ILE A:174 , ALA A:175 , HOH A:3069 , HOH A:3183BINDING SITE FOR RESIDUE GOL A 2003
09AC9SOFTWAREASP A:103 , THR A:106 , ASN A:141 , HOH A:3180 , ASN B:141 , SER B:143 , GLU B:158 , GOL B:2019BINDING SITE FOR RESIDUE GOL A 2004
10BC1SOFTWAREGLY A:229BINDING SITE FOR RESIDUE GOL A 2005
11BC2SOFTWARESER A:289 , HIS A:290 , TYR A:292BINDING SITE FOR RESIDUE GOL A 2006
12BC3SOFTWAREASP A:115BINDING SITE FOR RESIDUE GOL A 2007
13BC4SOFTWAREASP A:203 , ASN B:65 , LYS B:126 , NAG B:1066BINDING SITE FOR RESIDUE NAG B 1065
14BC5SOFTWARENAG B:1065BINDING SITE FOR RESIDUE NAG B 1066
15BC6SOFTWAREARG B:280 , ASN B:282 , HIS B:290 , TYR B:292 , ASN B:407 , NAG B:1283 , HOH B:3277BINDING SITE FOR RESIDUE NAG B 1282
16BC7SOFTWARENAG B:1282BINDING SITE FOR RESIDUE NAG B 1283
17BC8SOFTWARETYR B:432 , ASN B:434 , GLU B:558BINDING SITE FOR RESIDUE NAG B 1434
18BC9SOFTWAREARG B:453 , SER B:456 , ASN B:461 , NAG B:1462BINDING SITE FOR RESIDUE NAG B 1461
19CC1SOFTWARENAG B:1461 , BMA B:1463 , MAN B:1465BINDING SITE FOR RESIDUE NAG B 1462
20CC2SOFTWAREGLN A:433 , NAG B:1462 , MAN B:1464 , MAN B:1465BINDING SITE FOR RESIDUE BMA B 1463
21CC3SOFTWAREASN A:427 , BMA B:1463BINDING SITE FOR RESIDUE MAN B 1464
22CC4SOFTWARENAG B:1462 , BMA B:1463BINDING SITE FOR RESIDUE MAN B 1465
23CC5SOFTWAREASP B:189 , PHE B:190 , LEU B:191BINDING SITE FOR RESIDUE GOL B 2016
24CC6SOFTWAREGLN B:59 , ASP B:115 , GLU B:116 , PHE B:120 , HOH B:3192BINDING SITE FOR RESIDUE GOL B 2017
25CC7SOFTWAREVAL B:123 , LEU B:124 , ILE B:174 , ALA B:175BINDING SITE FOR RESIDUE GOL B 2018
26CC8SOFTWAREARG A:100 , ASN A:138 , ASN A:141 , PRO A:142 , GOL A:2004 , ASP B:103BINDING SITE FOR RESIDUE GOL B 2019

(-) SS Bonds  (16, 16)

Asymmetric/Biological Unit
No.Residues
1A:107 -A:117
2A:135 -A:144
3A:258 -A:369
4A:283 -A:328
5A:477 -A:506
6A:515 -A:533
7A:521 -A:568
8A:525 -A:542
9B:107 -B:117
10B:135 -B:144
11B:258 -B:369
12B:283 -B:328
13B:477 -B:506
14B:515 -B:533
15B:521 -B:568
16B:525 -B:542

(-) Cis Peptide Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1Lys A:363 -Pro A:364
2Gly A:566 -Asp A:567
3Lys B:363 -Pro B:364
4Gly B:566 -Asp B:567

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3OKW)

(-) PROSITE Motifs  (1, 2)

Asymmetric/Biological Unit (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SEMAPS51004 Sema domain profile.SEM6A_MOUSE24-512
 		  2A:24-512
B:24-512

(-) Exons   (0, 0)

(no "Exon" information available for 3OKW)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:540
 aligned with SEM6A_MOUSE | O35464 from UniProtKB/Swiss-Prot  Length:1031

    Alignment length:549
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559         
          SEM6A_MOUSE    20 FPEDSEPISISHGNYTKQYPVFVGHKPGRNTTQRHRLDIQMIMIMNRTLYVAARDHIYTVDIDTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNFIKVLLKKNDDTLFVCGTNAFNPSCRNYRVDTLETFGDEFSGMARCPYDAKHANIALFADGKLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVTDVIRINGRDVVLATFSTPYNSIPGSAVCAYDMLDIANVFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPLMDEAVPSIINRPWFLRTMVRYRLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGSLYVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGWVRESGSCAHLSPLSRLTFEQDIERGNTDGLGDC 568
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeehhhhhh...ee.......--.........eeeee..eeeee...eeeeee.hhh...ee...eeee...hhhhhhhhhhh..........eeeeeeee..eeeeee......eeeeee.....eeeeeee.............eeeee..eeeeeee.......eeeeee......ee............eeeeeeee..eeeeeeeee.hhhh--...eeeeeeeee..................eeee...ee.....ee..eeeee...eee..eeeeeeeee........eeeeeeehhhhhhhh....ee........ee.hhhhh..................hhhhhhhhhhhhhhhh...............eee......eeeeeeeeee.....eeeeeeee...eeeeeee....---...eeeeeeee..hhhhhh..........eeeeehhh.eeeee....eeeee...hhhhh.hhhhhhhh....eeee....eeee...--................... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----SEMA  PDB: A:24-512 UniProt: 24-512                                                                                                                                                                                                                                                                                                                                                                                                                                                                      -------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3okw A  20 FPEDSEPISISHGNYTKQYPVFVGHKPGR--TQRHRLDIQMIMIMNRTLYVAARDHIYTVDIDTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNFIKVLLKKNDDTLFVCGTNAFNPSCRNYRVDTLETFGDEFSGMARCPYDAKHANIALFADGKLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYN--GKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVTDVIRINGRDVVLATFSTPYNSIPGSAVCAYDMLDIANVFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPLMDEAVPSIINRPWFLRTMVRYRLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGS---LNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGSLYVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGWVRESGSCAHLSP--RLTFEQDIERGNTDGLGDC 568
                                    29        39        |- |      59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239    |  249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449      |  -|      469       479       489       499       509       519       529       539       | -|      559         
                                                       48 51                                                                                                                                                                                              244  |                                                                                                                                                                                                              456 460                                                                                    547  |                  
                                                                                                                                                                                                                                                             247                                                                                                                                                                                                                                                                                                            550                  


Chain B from PDB  Type:PROTEIN  Length:522
 aligned with SEM6A_MOUSE | O35464 from UniProtKB/Swiss-Prot  Length:1031

    Alignment length:549
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559         
          SEM6A_MOUSE    20 FPEDSEPISISHGNYTKQYPVFVGHKPGRNTTQRHRLDIQMIMIMNRTLYVAARDHIYTVDIDTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNFIKVLLKKNDDTLFVCGTNAFNPSCRNYRVDTLETFGDEFSGMARCPYDAKHANIALFADGKLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVTDVIRINGRDVVLATFSTPYNSIPGSAVCAYDMLDIANVFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPLMDEAVPSIINRPWFLRTMVRYRLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGSLYVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGWVRESGSCAHLSPLSRLTFEQDIERGNTDGLGDC 568
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ----------    --------------       -Sema-3okwB03 B:56-491                                                                                                                                                                                                                                                                                                                                                                                                                               ----------------------PSI-3  okwB01 B:514-568                                 Pfam domains (1)
           Pfam domains (2) ----------    --------------       -Sema-3okwB04 B:56-491                                                                                                                                                                                                                                                                                                                                                                                                                               ----------------------PSI-3  okwB02 B:514-568                                 Pfam domains (2)
         Sec.struct. author ..........----......ee......-------.....eeeee..eeeee...eeeeee.......ee...eeee...hhhhhhhhhhh..........eeeeee....eeeeee......eeeeee..........ee.............eeeee..eeeeeee.......eeeeee......ee............eeeeeeee..eeeeeeeee.....--...eeeeeeeee..................eeee...ee.....ee..eeeee...ee....eeeeeeee........eeeeeeehhhhhhhh....eee......eee.hhhhh..................hhhhhhhhhhhhhhhh...............eee......eeeeeeeeee.....eeeeeeee...eeeeeee....---...eeeeeeee..hhhhhh..........eeeeehhh.eeeee....eeeee..hhhhh--hhhhhhhh.....eee....eee.---------............... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----SEMA  PDB: B:24-512 UniProt: 24-512                                                                                                                                                                                                                                                                                                                                                                                                                                                                      -------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3okw B  20 FPEDSEPISI----YTKQYPVFVGHKPG-------RLDIQMIMIMNRTLYVAARDHIYTVDIDTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNFIKVLLKKNDDTLFVCGTNAFNPSCRNYRVDTLETFGDEFSGMARCPYDAKHANIALFADGKLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYN--GKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVTDVIRINGRDVVLATFSTPYNSIPGSAVCAYDMLDIANVFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPLMDEAVPSIINRPWFLRTMVRYRLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGS---LNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGSLYVAFSTCVIKVPLGRCERH--CKKTCIASRDPYCGWVRESGSCAH---------EQDIERGNTDGLGDC 568
                                    29    |   39       | -     |  59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239    |  249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449      |  -|      469       479       489       499       509        |- |     529       539    |    -    |  559         
                                    29   34           47      55                                                                                                                                                                                          244  |                                                                                                                                                                                                              456 460                                                       518  |                    544       554              
                                                                                                                                                                                                                                                             247                                                                                                                                                                                                                                                                               521
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3OKW)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3OKW)

(-) Pfam Domains  (2, 4)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: PSI] (9)
(-)
Family: PSI (9)
(-)
Mus musculus (Mouse) (3)
1aPSI-3okwB01B:514-568
1bPSI-3okwB02B:514-568
(-)
Clan: no clan defined [family: Sema] (8)

(-) Gene Ontology  (22, 22)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B   (SEM6A_MOUSE | O35464)
molecular function
    GO:0045499    chemorepellent activity    Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0030215    semaphorin receptor binding    Interacting selectively and non-covalently with semaphorin receptors.
    GO:0004888    transmembrane signaling receptor activity    Combining with an extracellular or intracellular signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction.
biological process
    GO:0006915    apoptotic process    A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.
    GO:0007411    axon guidance    The chemotaxis process that directs the migration of an axon growth cone to a specific target site in response to a combination of attractive and repulsive cues.
    GO:0030154    cell differentiation    The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.
    GO:0007166    cell surface receptor signaling pathway    A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription.
    GO:0051642    centrosome localization    Any process in which a centrosome is transported to, and/or maintained in, a specific location within the cell.
    GO:0007275    multicellular organism development    The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
    GO:0050919    negative chemotaxis    The directed movement of a motile cell or organism towards a lower concentration of a chemical.
    GO:0048843    negative regulation of axon extension involved in axon guidance    Any process that stops, prevents, or reduces the frequency, rate or extent of axon extension involved in axon guidance.
    GO:0007399    nervous system development    The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state.
    GO:0001755    neural crest cell migration    The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo.
    GO:0001764    neuron migration    The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature.
    GO:2001224    positive regulation of neuron migration    Any process that activates or increases the frequency, rate or extent of neuron migration.
    GO:0071526    semaphorin-plexin signaling pathway    A series of molecular signals generated as a consequence of a semaphorin receptor (composed of a plexin and a neurophilin) binding to a semaphorin ligand.
cellular component
    GO:0030424    axon    The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0005887    integral component of plasma membrane    The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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  Cis Peptide Bonds
    Gly A:566 - Asp A:567   [ RasMol ]  
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  3okw
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SEM6A_MOUSE | O35464: 3afc 3al8 3oky

(-) Related Entries Specified in the PDB File

3okt 3oky