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(-) Description

Title :  CRYSTAL STRUCTURE OF MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYNTHESIS PROTEIN A FROM ARCHAEOGLOBUS FULGIDUS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET GR189
 
Authors :  F. Forouhar, H. Neely, J. Seetharaman, P. Patel, R. Xiao, C. Ciccosanti J. K. Everett, R. Nair, T. B. Acton, B. Rost, G. T. Montelione, J. F. Hunt Northeast Structural Genomics Consortium (Nesg)
Date :  13 Jun 10  (Deposition) - 11 Aug 10  (Release) - 11 Aug 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.31
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (2x)
Keywords :  Alpha-Beta Protein, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Biosynthetic Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Forouhar, H. Neely, J. Seetharaman, P. Patel, R. Xiao, C. Ciccosanti, H. Wang, J. K. Everett, R. Nair, T. B. Acton, B. Rost, G. T. Montelione, J. F. Hunt, L. Tong
Northeast Structural Genomics Consortium Target Gr189
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYNTHESIS PROTEIN A (MOBA)
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET 21-23C
    Expression System Strain: BL21(DE3)+ MAGIC
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: AF_2005, MOBA
    Organism Scientific: ARCHAEOGLOBUS FULGIDUS
    Organism Taxid: 2234
    Strain: DSM 4304

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 7)

Asymmetric Unit (2, 7)
No.NameCountTypeFull Name
1CA2Ligand/IonCALCIUM ION
2MSE5Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 5)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2MSE5Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 10)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2MSE10Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLU A:109 , ASP A:136 , HOH A:262 , HOH A:263 , HOH A:267BINDING SITE FOR RESIDUE CA A 209
2AC2SOFTWAREASP A:184 , HOH A:265 , HOH A:268BINDING SITE FOR RESIDUE CA A 210

(-) SS Bonds  (1, 1)

Asymmetric Unit
No.Residues
1A:24 -A:192

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3NGW)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:195
 aligned with O28274_ARCFU | O28274 from UniProtKB/TrEMBL  Length:200

    Alignment length:195
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190     
         O28274_ARCFU     1 MKVAVLVGGVGRRIGMEKTEVMLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEAEFIWDLHKGVGSIAGIHAALRHFGSCVVAAIDMPFVKPEVLEHLYKEGEKAGCDALIPKHDYPEPLLAYYAESAADELERAILQGIRKILVPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICSKM 195
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --NTP_transf_3-3ngwA01 A:3-185                                                                                                                                                           ---------- Pfam domains
         Sec.struct. author .eeeee..........hhhh.ee..eehhhhhhhhhh..eeeee..hhhhhhhhhh.....ee.......hhhhhhhhhhhhhh.eeeee......hhhhhhhhhhhhhhhh..eeeee.......eeee...hhhhhhhhhhh....hhhhhhh..eeeee.hhhh.....hhhhh...hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ngw A   1 mKVAVLVGGVGRRIGmEKTEVmLCGKKLIEWVLEKYSPFQTVFVCRDEKQAEKLSSRYEAEFIWDLHKGVGSIAGIHAALRHFGSCVVAAIDmPFVKPEVLEHLYKEGEKAGCDALIPKHDYPEPLLAYYAESAADELERAILQGIRKILVPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICSKm 195
                            |       10     |  20 |      30        40        50        60        70        80        90  |    100       110       120       130       140       150       160       170       180       190    |
                            |             16-MSE |                                                                     93-MSE                                                                                               195-MSE
                            1-MSE               22-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3NGW)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (1, 1)

Asymmetric Unit
(-)
Clan: GT-A (172)

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Asymmetric Unit(hide GO term definitions)
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