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(-) Description

Title :  CRYSTAL STRUCTURE OF AN IMMUNOGLOBULIN-LIKE PROTEIN (PA1606) FROM PSEUDOMONAS AERUGINOSA AT 1.50 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  26 May 10  (Deposition) - 21 Jul 10  (Release) - 21 Jul 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  A,B  (1x)
Keywords :  Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of An Immunoglobulin-Like Protein (Pa1606 From Pseudomonas Aeruginosa At 1. 50 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - IMMUNOGLOBULIN-LIKE PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Strain: HK100
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: PA1606
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 287

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B
Biological Unit 3 (1x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 8)

Asymmetric Unit (3, 8)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
2PG41Ligand/IonTETRAETHYLENE GLYCOL
3SO41Ligand/IonSULFATE ION
Biological Unit 1 (2, 4)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE
2PG41Ligand/IonTETRAETHYLENE GLYCOL
3SO4-1Ligand/IonSULFATE ION
Biological Unit 2 (2, 4)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE
2PG4-1Ligand/IonTETRAETHYLENE GLYCOL
3SO41Ligand/IonSULFATE ION
Biological Unit 3 (3, 8)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
2PG41Ligand/IonTETRAETHYLENE GLYCOL
3SO41Ligand/IonSULFATE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:105 , ARG B:28 , ARG B:148 , HOH B:187 , HOH B:197 , HOH B:344BINDING SITE FOR RESIDUE SO4 B 1
2AC2SOFTWAREASP A:30 , LEU A:79 , SER A:80 , PRO A:117 , GLY A:118 , ALA A:119 , PRO A:120BINDING SITE FOR RESIDUE PG4 A 2

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3N6Y)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3N6Y)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3N6Y)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3N6Y)

(-) Exons   (0, 0)

(no "Exon" information available for 3N6Y)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:124
 aligned with Q9I3B5_PSEAE | Q9I3B5 from UniProtKB/TrEMBL  Length:158

    Alignment length:137
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       
         Q9I3B5_PSEAE    22 AAQAEVRIDGPIEYGVFESRYQDFQPGERVLTRSEQNIQQTTEVPAKLGTKFGMRYQLSGKQEGDTPLTLLYLTPGVVTPDGQRHDKFEVVQKLVPGAPTDVMAYEFTEPHEVVKGEWRLMVFQGDRLLAEKSFDVR 158
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee....eeeee...-------------....eee..eee.....eeeeee.ee........eeeeeeeeeee.....eeeeeeeee........eeeeee..hhhhh..eeeeeeeee..eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3n6y A   0 GAQAEVRIDGPIEYGVFESR-------------SEQNIQQTTEVPAKLGTKFGmRYQLSGKQEGDTPLTLLYLTPGVVTPDGQRHDKFEVVQKLVPGAPTDVmAYEFTEPHEVVKGEWRLmVFQGDRLLAEKSFDVR 158
                            ||      31        41         -   |    61        71   |    81        91       101       111       121  |    131       141|      151       
                            ||                41            55                  75-MSE                                          124-MSE           142-MSE            
                            0|                                                                                                                                       
                            23                                                                                                                                       


Chain B from PDB  Type:PROTEIN  Length:123
 aligned with Q9I3B5_PSEAE | Q9I3B5 from UniProtKB/TrEMBL  Length:158

    Alignment length:137
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       
         Q9I3B5_PSEAE    22 AAQAEVRIDGPIEYGVFESRYQDFQPGERVLTRSEQNIQQTTEVPAKLGTKFGMRYQLSGKQEGDTPLTLLYLTPGVVTPDGQRHDKFEVVQKLVPGAPTDVMAYEFTEPHEVVKGEWRLMVFQGDRLLAEKSFDVR 158
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -DUF3859-3n6yB01 B:              23-157                                                                                                 - Pfam domains (1)
           Pfam domains (2) -DUF3859-3n6yB02 B:              23-157                                                                                                 - Pfam domains (2)
         Sec.struct. author ......ee....eeeee..--------------....ee...eee.....eeeeee.ee........eeeeeeeeeee.....eeeeeeeee........eeeeee..hhhhh..eeeeeeeee..eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3n6y B   0 GAQAEVRIDGPIEYGVFES--------------SEQNIQQTTEVPAKLGTKFGmRYQLSGKQEGDTPLTLLYLTPGVVTPDGQRHDKFEVVQKLVPGAPTDVmAYEFTEPHEVVKGEWRLmVFQGDRLLAEKSFDVR 158
                            ||      31        |-         -   |    61        71   |    81        91       101       111       121  |    131       141|      151       
                            0|               40             55                  75-MSE                                          124-MSE           142-MSE            
                            23
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3N6Y)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3N6Y)

(-) Pfam Domains  (1, 2)

Asymmetric Unit
(-)
Clan: no clan defined [family: DUF3859] (1)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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