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(-) Description

Title :  CRYSTAL STRUCTURE OF MANDELATE RACEMASE/MUCONATE LACTONIZING PROTEIN FROM ACTINOBACILLUS SUCCINOGENES 130Z
 
Authors :  V. N. Malashkevich, R. Toro, J. M. Sauder, S. K. Burley, S. C. Almo, New Y Structural Genomix Research Consortium (Nysgxrc), New York S Research Center For Structural Genomics (Nysgxrc)
Date :  25 May 10  (Deposition) - 21 Jul 10  (Release) - 21 Jul 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Structural Genomics, Protein Structure Initiative, New York Structural Genomix Research Consortium, Nysgxrc, Enolase, Psi-2, Isomerase, New York Sgx Research Center For Structural Genomics (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  V. N. Malashkevich, R. Toro, J. M. Sauder, S. K. Burley, S. C. Almo
Crystal Structure Of Mandelate Racemase/Muconate Lactonizin Protein From Actinobacillus Succinogenes 130Z
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - MANDELATE RACEMASE/MUCONATE LACTONIZING PROTEIN
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: BC-PSGX3(BC)
    Expression System Strain: BL21(DE3)CODON+RIL
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: 152979509, ASUC_1852
    Organism Scientific: ACTINOBACILLUS SUCCINOGENES
    Organism Taxid: 339671
    Strain: 130Z

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 56)

Asymmetric/Biological Unit (1, 56)
No.NameCountTypeFull Name
1MSE56Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 3N6J)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3N6J)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Gly A:103 -Ala A:104
2Gly D:103 -Ala D:104

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3N6J)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3N6J)

(-) Exons   (0, 0)

(no "Exon" information available for 3N6J)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:442
 aligned with A6VQF6_ACTSZ | A6VQF6 from UniProtKB/TrEMBL  Length:445

    Alignment length:442
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443  
         A6VQF6_ACTSZ     4 QSVPVITDMKVIPVAGHDSMLMNVGGAHSPYFTRNIVILTDNSGHTGVGEAPGGATIENALTEAIPHVVGRPISILNKIVNDMHNGYLDADYDTFGKGAWTFELRVNAVAALEAALLDLMGQFLGVPVAELLGPGKQRDEVTVLGYLFYVGDDKITDLPYQQPVTGKHEWYDIRRKKAMDTQAVIELAAASKDRYGFKDFKLKGGVFEGSKEIDTVIELKKHFPDARITLDPNGCWSLDEAIQLCKGLNDVLTYAEDPCIGENGYSGREIMAEFRRRTGIPTATNMIATNWREMCHAIMLQSVDIPLADPHFWTLTGASRVAQLCNEWGLTWGCHSNNHFDISLAMFSHVGAAAPGNPTALDTHWIWQEGDFYLTKNPLEIKDGKIKLNDKPGLGIELNMDNVLKAHELHKKLPNGARNDAIPMQFYYPGWKFDRKRPAMVR 445
               SCOP domains d3n6ja1 A:6-138 automated matches                                                                                                    d3n6ja2 A:139-447 automated matches                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeeeeeeee....ee..ee...eeeeeeeeeee....eeeeeee.hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh.hhhhh........eee..eee....hhhhh...........hhhhhhh.....hhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhh.......eee.........hhhhhhhhhhhhhh..eee.....hhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh..........hhhhhh...........ee..eee...........hhhhhhhhhhhhhh.......hhhhhh................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3n6j A   6 QSVPVITDmKVIPVAGHDSmLmNVGGAHSPYFTRNIVILTDNSGHTGVGEAPGGATIENALTEAIPHVVGRPISILNKIVNDmHNGYLDADYDTFGKGAWTFELRVNAVAALEAALLDLmGQFLGVPVAELLGPGKQRDEVTVLGYLFYVGDDKITDLPYQQPVTGKHEWYDIRRKKAmDTQAVIELAAASKDRYGFKDFKLKGGVFEGSKEIDTVIELKKHFPDARITLDPNGCWSLDEAIQLCKGLNDVLTYAEDPCIGENGYSGREImAEFRRRTGIPTATNmIATNWREmCHAImLQSVDIPLADPHFWTLTGASRVAQLCNEWGLTWGCHSNNHFDISLAmFSHVGAAAPGNPTALDTHWIWQEGDFYLTKNPLEIKDGKIKLNDKPGLGIELNmDNVLKAHELHKKLPNGARNDAIPmQFYYPGWKFDRKRPAmVR 447
                                    15        25 |      35        45        55        65        75        85  |     95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275|      285     | 295   |   305       315       325       335       345     | 355       365       375       385       395       405       415       425   |   435       445  
                                   14-MSE     25-MSE                                                         88-MSE                              125-MSE                                                    184-MSE                                                                                     276-MSE        291-MSE 299-MSE|                                            351-MSE                                               405-MSE                 429-MSE         445-MSE
                                                27-MSE                                                                                                                                                                                                                                                                              304-MSE                                                                                                                                           


Chain B from PDB  Type:PROTEIN  Length:432
 aligned with A6VQF6_ACTSZ | A6VQF6 from UniProtKB/TrEMBL  Length:445

    Alignment length:444
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   445  
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443 |  
         A6VQF6_ACTSZ     4 QSVPVITDMKVIPVAGHDSMLMNVGGAHSPYFTRNIVILTDNSGHTGVGEAPGGATIENALTEAIPHVVGRPISILNKIVNDMHNGYLDADYDTFGKGAWTFELRVNAVAALEAALLDLMGQFLGVPVAELLGPGKQRDEVTVLGYLFYVGDDKITDLPYQQPVTGKHEWYDIRRKKAMDTQAVIELAAASKDRYGFKDFKLKGGVFEGSKEIDTVIELKKHFPDARITLDPNGCWSLDEAIQLCKGLNDVLTYAEDPCIGENGYSGREIMAEFRRRTGIPTATNMIATNWREMCHAIMLQSVDIPLADPHFWTLTGASRVAQLCNEWGLTWGCHSNNHFDISLAMFSHVGAAAPGNPTALDTHWIWQEGDFYLTKNPLEIKDGKIKLNDKPGLGIELNMDNVLKAHELHKKLPNGARNDAIPMQFYYPGWKFDRKRPAMVR--   -
               SCOP domains d3n6jb1 B:6-138 automated matches                                                                                                    d3n6jb2 B:139-449 automated matches                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeeeeeeeeeee....ee..ee...eeeeeeeeeee....eeeeeee.hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.------------.hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eee..eee....hhhhh...........hhhhhhh.....hhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhh.eeeee.........hhhhhhhhhhhhhh..eee.....hhhhhhhhhhhh...ee..hhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhh.........hhhhhh...........ee..eee...........hhhhhhhhhhhhhhh.........hhhhh................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3n6j B   6 QSVPVITDmKVIPVAGHDSmLmNVGGAHSPYFTRNIVILTDNSGHTGVGEAPGGATIENALTEAIPHVVGRPISILNKIVNDmHNGY------------WTFELRVNAVAALEAALLDLmGQFLGVPVAELLGPGKQRDEVTVLGYLFYVGDDKITDLPYQQPVTGKHEWYDIRRKKAmDTQAVIELAAASKDRYGFKDFKLKGGVFEGSKEIDTVIELKKHFPDARITLDPNGCWSLDEAIQLCKGLNDVLTYAEDPCIGENGYSGREImAEFRRRTGIPTATNmIATNWREmCHAImLQSVDIPLADPHFWTLTGASRVAQLCNEWGLTWGCHSNNHFDISLAmFSHVGAAAPGNPTALDTHWIWQEGDFYLTKNPLEIKDGKIKLNDKPGLGIELNmDNVLKAHELHKKLPNGARNDAIPmQFYYPGWKFDRKRPAmVREG 449
                                    15        25 |      35        45        55        65        75        85  |   |  -       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275|      285     | 295   |   305       315       325       335       345     | 355       365       375       385       395       405       415       425   |   435       445    
                                   14-MSE     25-MSE                                                         88-MSE          105                 125-MSE                                                    184-MSE                                                                                     276-MSE        291-MSE 299-MSE|                                            351-MSE                                               405-MSE                 429-MSE         445-MSE
                                                27-MSE                                                                                                                                                                                                                                                                              304-MSE                                                                                                                                             


Chain C from PDB  Type:PROTEIN  Length:442
 aligned with A6VQF6_ACTSZ | A6VQF6 from UniProtKB/TrEMBL  Length:445

    Alignment length:442
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443  
         A6VQF6_ACTSZ     4 QSVPVITDMKVIPVAGHDSMLMNVGGAHSPYFTRNIVILTDNSGHTGVGEAPGGATIENALTEAIPHVVGRPISILNKIVNDMHNGYLDADYDTFGKGAWTFELRVNAVAALEAALLDLMGQFLGVPVAELLGPGKQRDEVTVLGYLFYVGDDKITDLPYQQPVTGKHEWYDIRRKKAMDTQAVIELAAASKDRYGFKDFKLKGGVFEGSKEIDTVIELKKHFPDARITLDPNGCWSLDEAIQLCKGLNDVLTYAEDPCIGENGYSGREIMAEFRRRTGIPTATNMIATNWREMCHAIMLQSVDIPLADPHFWTLTGASRVAQLCNEWGLTWGCHSNNHFDISLAMFSHVGAAAPGNPTALDTHWIWQEGDFYLTKNPLEIKDGKIKLNDKPGLGIELNMDNVLKAHELHKKLPNGARNDAIPMQFYYPGWKFDRKRPAMVR 445
               SCOP domains d3n6jc1 C:6-138 automated matches                                                                                                    d3n6jc2 C:139-447 automated matches                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeeeeeeee...eee..ee...eeeeeeeeeee....eeeeeee.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhh.hhhhh........eee..eee.ee.hhhhh............hhhhhh.....hhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhh........eee.........hhhhhhhhhhhhhh..eee.....hhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhh.........hhhhh............ee..eee...........hhhhhhhhhhhhhh.......hhhhhh................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3n6j C   6 QSVPVITDmKVIPVAGHDSmLmNVGGAHSPYFTRNIVILTDNSGHTGVGEAPGGATIENALTEAIPHVVGRPISILNKIVNDmHNGYLDADYDTFGKGAWTFELRVNAVAALEAALLDLmGQFLGVPVAELLGPGKQRDEVTVLGYLFYVGDDKITDLPYQQPVTGKHEWYDIRRKKAmDTQAVIELAAASKDRYGFKDFKLKGGVFEGSKEIDTVIELKKHFPDARITLDPNGCWSLDEAIQLCKGLNDVLTYAEDPCIGENGYSGREImAEFRRRTGIPTATNmIATNWREmCHAImLQSVDIPLADPHFWTLTGASRVAQLCNEWGLTWGCHSNNHFDISLAmFSHVGAAAPGNPTALDTHWIWQEGDFYLTKNPLEIKDGKIKLNDKPGLGIELNmDNVLKAHELHKKLPNGARNDAIPmQFYYPGWKFDRKRPAmVR 447
                                    15        25 |      35        45        55        65        75        85  |     95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275|      285     | 295   |   305       315       325       335       345     | 355       365       375       385       395       405       415       425   |   435       445  
                                   14-MSE     25-MSE                                                         88-MSE                              125-MSE                                                    184-MSE                                                                                     276-MSE        291-MSE 299-MSE|                                            351-MSE                                               405-MSE                 429-MSE         445-MSE
                                                27-MSE                                                                                                                                                                                                                                                                              304-MSE                                                                                                                                           


Chain D from PDB  Type:PROTEIN  Length:440
 aligned with A6VQF6_ACTSZ | A6VQF6 from UniProtKB/TrEMBL  Length:445

    Alignment length:440
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445
         A6VQF6_ACTSZ     6 VPVITDMKVIPVAGHDSMLMNVGGAHSPYFTRNIVILTDNSGHTGVGEAPGGATIENALTEAIPHVVGRPISILNKIVNDMHNGYLDADYDTFGKGAWTFELRVNAVAALEAALLDLMGQFLGVPVAELLGPGKQRDEVTVLGYLFYVGDDKITDLPYQQPVTGKHEWYDIRRKKAMDTQAVIELAAASKDRYGFKDFKLKGGVFEGSKEIDTVIELKKHFPDARITLDPNGCWSLDEAIQLCKGLNDVLTYAEDPCIGENGYSGREIMAEFRRRTGIPTATNMIATNWREMCHAIMLQSVDIPLADPHFWTLTGASRVAQLCNEWGLTWGCHSNNHFDISLAMFSHVGAAAPGNPTALDTHWIWQEGDFYLTKNPLEIKDGKIKLNDKPGLGIELNMDNVLKAHELHKKLPNGARNDAIPMQFYYPGWKFDRKRPAMVR 445
               SCOP domains d3n6jd1 D:8-138 automated matches                                                                                                  d3n6jd2 D:139-447 automated matches                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -----------------MR_MLE_N-3n6jD01 D:25-138                                                                                         ---------------------------------------------------------------------------------MR_MLE-3n6jD05 D:220-290                                               ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) -----------------MR_MLE_N-3n6jD02 D:25-138                                                                                         ---------------------------------------------------------------------------------MR_MLE-3n6jD06 D:220-290                                               ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) -----------------MR_MLE_N-3n6jD03 D:25-138                                                                                         ---------------------------------------------------------------------------------MR_MLE-3n6jD07 D:220-290                                               ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) -----------------MR_MLE_N-3n6jD04 D:25-138                                                                                         ---------------------------------------------------------------------------------MR_MLE-3n6jD08 D:220-290                                               ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (4)
         Sec.struct. author ...eeeeeeeeeeee.............eeeeeeeeeee....eeeeeee.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eee..eee....hhhhh...........hhhhhhh.....hhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhh.....eeeee.........hhhhhhhhhhhhhh..eee.....hhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhh...........hhhhhh...............eee...........hhhhhhhhhhhhhh.......hhhhhh................. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3n6j D   8 VPVITDmKVIPVAGHDSmLmNVGGAHSPYFTRNIVILTDNSGHTGVGEAPGGATIENALTEAIPHVVGRPISILNKIVNDmHNGYLDADYDTFGKGAWTFELRVNAVAALEAALLDLmGQFLGVPVAELLGPGKQRDEVTVLGYLFYVGDDKITDLPYQQPVTGKHEWYDIRRKKAmDTQAVIELAAASKDRYGFKDFKLKGGVFEGSKEIDTVIELKKHFPDARITLDPNGCWSLDEAIQLCKGLNDVLTYAEDPCIGENGYSGREImAEFRRRTGIPTATNmIATNWREmCHAImLQSVDIPLADPHFWTLTGASRVAQLCNEWGLTWGCHSNNHFDISLAmFSHVGAAAPGNPTALDTHWIWQEGDFYLTKNPLEIKDGKIKLNDKPGLGIELNmDNVLKAHELHKKLPNGARNDAIPmQFYYPGWKFDRKRPAmVR 447
                                  | 17       |27        37        47        57        67        77        87|       97       107       117       127       137       147       157       167       177      |187       197       207       217       227       237       247       257       267       277       287   |   297 |    |307       317       327       337       347   |   357       367       377       387       397       407       417       427 |     437       447
                                 14-MSE     25-MSE                                                         88-MSE                              125-MSE                                                    184-MSE                                                                                     276-MSE        291-MSE 299-MSE|                                            351-MSE                                               405-MSE                 429-MSE         445-MSE
                                              27-MSE                                                                                                                                                                                                                                                                              304-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3N6J)

(-) Pfam Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Clan: Enolase_N (69)
(-)
Clan: Enolase_TIM (82)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (A6VQF6_ACTSZ | A6VQF6)
molecular function
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0009063    cellular amino acid catabolic process    The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

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  Cis Peptide Bonds
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    Gly D:103 - Ala D:104   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A6VQF6_ACTSZ | A6VQF6: 3n6h 3pfr

(-) Related Entries Specified in the PDB File

3n6h RELATED ID: NYSGXRC-9499D RELATED DB: TARGETDB