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(-) Description

Title :  CRYSTAL STRUCTURE OF SEX PHEROMONE STAPH-CAM373 PRECURSOR
 
Authors :  C. Chang, G. Chhor, S. Clancy, A. Joachimiak, Midwest Center For Str Genomics (Mcsg)
Date :  18 May 10  (Deposition) - 02 Jun 10  (Release) - 02 Jun 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.55
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Structural Genomics, Mcsg, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Chang, G. Chhor, S. Clancy, A. Joachimiak
Crystal Structure Of Sex Pheromone Staph-Cam373 Precursor
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - SEX PHEROMONE STAPH-CAM373
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)MAGIC
    Expression System Taxid: 469008
    Expression System Vector: PMCSG19
    Fragment: SEQUENCE DATABASE RESIDUES 57-340
    Gene: BC_4675
    Organism Scientific: BACILLUS CEREUS
    Organism Taxid: 226900
    Strain: ATCC 14579 / DSM 31

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 7)

Asymmetric Unit (1, 7)
No.NameCountTypeFull Name
1MSE7Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 14)
No.NameCountTypeFull Name
1MSE14Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 3N2Q)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3N2Q)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Tyr A:229 -Pro A:230

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3N2Q)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3N2Q)

(-) Exons   (0, 0)

(no "Exon" information available for 3N2Q)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:282
 aligned with Q816Y4_BACCR | Q816Y4 from UniProtKB/TrEMBL  Length:340

    Alignment length:286
                                    64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334      
         Q816Y4_BACCR    55 VIPLKEQKVINTANIKTNSKLDLAEYENGLINIATQQFDTESHVLQLNQYIPEKLIDELVAKVEAPVLTNIIEQDYFGKQNSNELSLSGVMIGLAMSSSVSNEEAMSKGTEVAKQLIEAINKNDKYNKSPITFAIFKQESTSSLKNGTYIASATVQKNDTNLGNWSTIDEKSYSYPSDEFTQAHGEDNTKINNFAKEIKGFSNGDFIPVNAKVSYKKDQMDTLNMNIVIKYNGKTELMALTQLAAQGMLDKLPKDAKVQLQIKSESKIEAVIIKEKNSDKPFVSFL 340
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --CamS-3n2qA01 A:57-337                                                                                                                                                                                                                                                                    --- Pfam domains
         Sec.struct. author ..........hhhhhhhh...hhhhhhhhhhhhhhhhh.....eeee....hhhhhhhhhhh.....eeeeeeeeeee.---...eeeeeeeeeee....hhhhhhhhhhhhhhhhhhhhhhh.......eeeeeee..........eeeeeeee...............eeeee.hhhhhhhhhhhhhhhhhhhhhhh..-.......eeeeeee..eeeeeeeeee...hhhhhhhhhhhhhhhhhhhhh....eeeeeee....eeeeeee.......eeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3n2q A  55 NAPLKEQKVINTANIKTNSKLDLAEYENGLINIATQQFDTESHVLQLNQYIPEKLIDELVAKVEAPVLTNIIEQDYFGK---NELSLSGVmIGLAmSSSVSNEEAmSKGTEVAKQLIEAINKNDKYNKSPITFAIFKQESTSSLKNGTYIASATVQKNDTNLGNWSTIDEKSYSYPSDEFTQAHGEDNTKINNFAKEIKGF-NGDFIPVNAKVSYKKDQmDTLNmNIVIKYNGKTELmALTQLAAQGmLDKLPKDAKVQLQIKSESKIEAVIIKEKNSDKPFVSFL 340
                                    64        74        84        94       104       114       124        |-  |    144|    | 154     | 164       174       184       194       204       214       224       234       244       254| |    264       274    |  284       294       304       314       324       334      
                                                                                                        133 137     145-MSE|       160-MSE                                                                                        255 |              274-MSE|          292-MSE   302-MSE                                  
                                                                                                                         150-MSE                                                                                                    257                   279-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3N2Q)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3N2Q)

(-) Pfam Domains  (1, 1)

Asymmetric Unit
(-)
Clan: no clan defined [family: CamS] (1)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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  Cis Peptide Bonds
    Tyr A:229 - Pro A:230   [ RasMol ]  
 
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