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(-) Description

Title :  CRYSTAL STRUCTURE OF AN ABC-TYPE BRANCHED-CHAIN AMINO ACID TRANSPORTER (RPA4397) FROM RHODOPSEUDOMONAS PALUSTRIS CGA009 AT 1.50 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  14 May 10  (Deposition) - 14 Jul 10  (Release) - 14 Jul 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym./Biol. Unit :  A
Keywords :  Receptor Family Ligand Binding Region, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of An Abc-Type Branched-Chain Amino Acid Transporter (Rpa4397) From Rhodopseudomonas Palustris Cga00 At 1. 50 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - POSSIBLE SUBSTRATE BINDING PROTEIN OF ABC TRANSPORTER SYSTEM
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Strain: HK100
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: RPA4397
    Organism Scientific: RHODOPSEUDOMONAS PALUSTRIS
    Organism Taxid: 1076
    Synonym: ABC-TYPE BRANCHED-CHAIN AMINO ACID TRANSPORTER

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 14)

Asymmetric/Biological Unit (2, 14)
No.NameCountTypeFull Name
1GOL3Ligand/IonGLYCEROL
2MSE11Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:138 , ASN A:250 , PHE A:298 , HOH A:501 , HOH A:811 , HOH A:828 , HOH A:835 , HOH A:867BINDING SITE FOR RESIDUE GOL A 401
2AC2SOFTWAREASP A:361 , ALA A:363BINDING SITE FOR RESIDUE GOL A 402
3AC3SOFTWAREGLN A:234 , GLU A:244 , LEU A:245 , PRO A:262 , GLY A:263 , MSE A:264 , HOH A:548BINDING SITE FOR RESIDUE GOL A 403

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3N0X)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Gly A:93 -Thr A:94
2Glu A:117 -Pro A:118

 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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Chain A from PDB  Type:PROTEIN  Length:371
 aligned with Q6N1K8_RHOPA | Q6N1K8 from UniProtKB/TrEMBL  Length:388

    Alignment length:371
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387 
         Q6N1K8_RHOPA    18 DLKIALIYGKTGPLEAYAKQTETGLMMGLEYATKGTMTLDGRKIVVITKDDQSKPDLSKAALAEAYQDDGADIAIGTSSSAAALADLPVAEENKKILIVEPAVADQITGEKWNRYIFRTGRNSSQDAISNAVAIGKQGVTIATLAQDYAFGRDGVAAFKEALAKTGATLATEEYVPTTTTDFTAVGQRLFDALKDKPGKKIIWVIWAGGGDPLTKLQDMDPKRYGIELSTGGNILPALAAYKRLPGMEGATYYYYDIPKNPINEWLVTEHQKRFNAPPDFFTAGGFSAAMAVVTAVQKAKSTDTEKLIAAMEGMEFDTPKGKMVFRKEDHQALQSMYHFKVKVDPAVAWAVLEPVRELKIEEMNIPIKNKK 388
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.....hhhhhhhhhhhhhhhhhhhh....ee..eeeeeeeee...hhhhhhhhhhhhhhh....eeee..hhhhhhhhhhhhhhhh..eee....hhhhhh......eee...hhhhhhhhhhhhhh...eeeeeeee.hhhhhhhhhhhhhhhh....eeeeeeee......hhhhhhhhhhhhh....eeeeee......hhhhhhhhhhhhhh.eeeee.....hhhhhhhhh...eeee........hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh..eeee..eeeee......ee..eeeeeee........eeeeeeeehhhhh........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3n0x A  18 DLKIALIYGKTGPLEAYAKQTETGLmmGLEYATKGTmTLDGRKIVVITKDDQSKPDLSKAALAEAYQDDGADIAIGTSSSAAALADLPVAEENKKILIVEPAVADQITGEKWNRYIFRTGRNSSQDAISNAVAIGKQGVTIATLAQDYAFGRDGVAAFKEALAKTGATLATEEYVPTTTTDFTAVGQRLFDALKDKPGKKIIWVIWAGGGDPLTKLQDmDPKRYGIELSTGGNILPALAAYKRLPGmEGATYYYYDIPKNPINEWLVTEHQKRFNAPPDFFTAGGFSAAmAVVTAVQKAKSTDTEKLIAAmEGmEFDTPKGKmVFRKEDHQALQSmYHFKVKVDPAVAWAVLEPVRELKIEEmNIPIKNKK 388
                                    27        37     || 47      | 57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257      |267       277       287       297       307       317       327|  |   337  |    347     | 357       367       377  |    387 
                                                    43-MSE     54-MSE                                                                                                                                                                               236-MSE                     264-MSE                                    307-MSE              328-MSE     340-MSE      353-MSE                    380-MSE    
                                                     44-MSE                                                                                                                                                                                                                                                                                        331-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3N0X)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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