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(-) Description

Title :  SUBSTRATE AND INHIBITOR BINDING TO PANK
 
Authors :  M. -K. Yun, S. W. White
Date :  14 Apr 10  (Deposition) - 15 Sep 10  (Release) - 15 Sep 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.98
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,C  (1x)
Biol. Unit 2:  B,D  (1x)
Keywords :  Pank, Inhibitor, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Leonardi, Y. M. Zhang, M. K. Yun, R. Zhou, F. Y. Zeng, W. Lin, J. Cui, T. Chen, C. O. Rock, S. W. White, S. Jackowski
Modulation Of Pantothenate Kinase 3 Activity By Small Molecules That Interact With The Substrate/Allosteric Regulatory Domain.
Chem. Biol. V. 17 892 2010
PubMed-ID: 20797618  |  Reference-DOI: 10.1016/J.CHEMBIOL.2010.06.006

(-) Compounds

Molecule 1 - PANTOTHENATE KINASE 3
    Chains: A, B, C, D
    EC Number: 2.7.1.33
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28ALIC
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: PANTOTHENATE KINASE 3
    Gene: PANK3
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: HPANK3, PANTOTHENIC ACID KINASE 3

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A C 
Biological Unit 2 (1x):  B D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 12)

Asymmetric Unit (2, 12)
No.NameCountTypeFull Name
1ACO4Ligand/IonACETYL COENZYME *A
2GOL8Ligand/IonGLYCEROL
Biological Unit 1 (2, 7)
No.NameCountTypeFull Name
1ACO2Ligand/IonACETYL COENZYME *A
2GOL5Ligand/IonGLYCEROL
Biological Unit 2 (2, 5)
No.NameCountTypeFull Name
1ACO2Ligand/IonACETYL COENZYME *A
2GOL3Ligand/IonGLYCEROL

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:17 , LYS A:24 , GLY A:115 , GLY A:116 , LYS A:135 , GLU A:138 , GLY A:191 , SER A:192 , GLY A:193 , VAL A:194 , SER A:195 , ARG A:207 , THR A:211 , ARG A:325 , HOH A:394 , HOH A:400 , HOH A:429 , HOH A:451 , HOH A:468 , HOH A:478 , HOH A:491 , HOH A:497 , HOH A:498 , HOH A:525 , ILE C:253 , TYR C:254 , ALA C:267 , VAL C:268 , ALA C:269 , ASN C:299 , TYR C:336 , TYR C:340 , TRP C:341BINDING SITE FOR RESIDUE ACO A 1901
02AC2SOFTWAREGLY A:191 , GLY A:215 , LEU A:219 , ASN A:322 , PHE A:323 , HOH A:413 , HOH A:525BINDING SITE FOR RESIDUE GOL A 369
03AC3SOFTWARETRP A:266 , TYR A:336 , ASP A:339 , TYR A:340 , HOH A:386 , HOH A:464BINDING SITE FOR RESIDUE GOL A 370
04AC4SOFTWARELEU A:75 , PHE A:76 , LYS A:202 , HOH A:425BINDING SITE FOR RESIDUE GOL A 371
05AC5SOFTWAREASP B:17 , GLY B:115 , GLY B:116 , LYS B:135 , GLU B:138 , GLY B:191 , SER B:192 , GLY B:193 , VAL B:194 , SER B:195 , ARG B:207 , THR B:211 , ASN B:322 , ARG B:325 , HOH B:399 , HOH B:403 , HOH B:430 , HOH B:433 , HOH B:441 , HOH B:442 , HOH B:455 , TYR D:254 , ALA D:267 , VAL D:268 , ALA D:269 , ASN D:299 , TYR D:340 , TRP D:341BINDING SITE FOR RESIDUE ACO B 1902
06AC6SOFTWAREGLY B:191 , GLY B:215 , LEU B:219 , ASN B:322 , PHE B:323 , HOH B:439 , HOH B:475BINDING SITE FOR RESIDUE GOL B 369
07AC7SOFTWAREILE A:253 , TYR A:254 , ALA A:267 , VAL A:268 , ALA A:269 , ASN A:299 , TYR A:340 , TRP A:341 , ASP C:17 , GLY C:115 , GLY C:116 , LYS C:135 , GLU C:138 , GLY C:191 , SER C:192 , GLY C:193 , VAL C:194 , SER C:195 , ARG C:207 , THR C:211 , ARG C:325 , HOH C:383 , HOH C:400 , HOH C:402 , HOH C:455 , HOH C:469 , HOH C:520BINDING SITE FOR RESIDUE ACO C 1903
08AC8SOFTWAREGLY C:191 , GLY C:215 , LEU C:219 , ASN C:322 , PHE C:323 , HOH C:421BINDING SITE FOR RESIDUE GOL C 369
09AC9SOFTWAREASN C:315 , GLN C:345 , LEU C:346 , LYS C:347 , HOH C:391 , HOH C:419BINDING SITE FOR RESIDUE GOL C 370
10BC1SOFTWAREILE B:253 , TYR B:254 , ALA B:267 , VAL B:268 , ALA B:269 , ASN B:299 , TYR B:336 , TYR B:340 , TRP B:341 , ASP D:17 , LYS D:24 , GLY D:115 , GLY D:116 , LYS D:135 , GLU D:138 , GLY D:191 , SER D:192 , GLY D:193 , VAL D:194 , SER D:195 , ARG D:207 , THR D:211 , ARG D:325 , HOH D:385 , HOH D:393 , HOH D:394 , HOH D:407 , HOH D:415 , HOH D:420BINDING SITE FOR RESIDUE ACO D 1904
11BC2SOFTWAREGLY D:191 , GLY D:215 , LEU D:219 , ASN D:322 , PHE D:323 , HOH D:452BINDING SITE FOR RESIDUE GOL D 369
12BC3SOFTWAREASN D:315 , GLN D:345 , LEU D:346 , LYS D:347 , HOH D:500BINDING SITE FOR RESIDUE GOL D 370

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3MK6)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Ser A:11 -Pro A:12
2Tyr A:183 -Pro A:184
3Ser B:11 -Pro B:12
4Tyr B:183 -Pro B:184
5Ser C:11 -Pro C:12
6Tyr C:183 -Pro C:184
7Ser D:11 -Pro D:12
8Tyr D:183 -Pro D:184

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3MK6)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3MK6)

(-) Exons   (7, 27)

Asymmetric Unit (7, 27)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1aENST000002392311aENSE00001370266chr5:168006605-168006261345PANK3_HUMAN1-10103A:6-11
B:7-11
C:6-11
-
6
5
6
-
1.3ENST000002392313ENSE00000812752chr5:167996003-167995651353PANK3_HUMAN10-1271184A:12-125 (gaps)
B:11-123 (gaps)
C:12-125 (gaps)
D:11-127 (gaps)
114
114
114
117
1.4bENST000002392314bENSE00000812753chr5:167993271-167993018254PANK3_HUMAN128-212854A:128-212
B:128-212 (gaps)
C:129-212
D:128-212
85
85
84
85
1.5ENST000002392315ENSE00000812754chr5:167991070-167990894177PANK3_HUMAN212-271604A:212-271
B:212-271
C:212-271
D:212-271
60
60
60
60
1.6ENST000002392316ENSE00000812755chr5:167988521-167988398124PANK3_HUMAN271-312424A:271-312
B:271-312
C:271-312
D:271-312
42
42
42
42
1.7ENST000002392317ENSE00000812756chr5:167986162-167986037126PANK3_HUMAN313-354424A:313-354
B:313-354
C:313-354
D:313-354
42
42
42
42
1.8bENST000002392318bENSE00001249572chr5:167984626-1679755009127PANK3_HUMAN355-370164A:355-368
B:355-368
C:355-367
D:355-365
14
14
13
11

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:354
 aligned with PANK3_HUMAN | Q9H999 from UniProtKB/Swiss-Prot  Length:370

    Alignment length:368
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360        
          PANK3_HUMAN     1 MKIKDAKKPSFPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRTIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGLPN 368
               SCOP domains d3mk6a     1 A:6-156 Pantothenate kinase 3, PANK3                                                                                                           d3mk6a2 A:157-368 Pantothenate kinase 3, PANK3                                                                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......-----..eeeee...eeeeeeeee....hhhhhhhhhhhhhhhhhhh..-------hhhhhhheeeeee..eeeeeeeeeee..hhhhhhhhhhhh.hhhhh.eeee...hhhhhh...--....eeee.hhhhhhhhhhhhhhhhh......eeeee........eeee........eeeeee...eeeeeeee..eeeeeeee..hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.eehhhhhh..hhhhh.....eee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeehhhhh..hhhhhhhhhhhhhhh.....eeee....hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1a ---------------------------------------------------------------------------------------------------------------------Exon 1.4b  PDB: A:128-212 UniProt: 128-212                                           ----------------------------------------------------------Exon 1.6  PDB: A:271-312 UniProt: 271-312 Exon 1.7  PDB: A:313-354 UniProt: 313-354 Exon 1.8b      Transcript 1 (1)
           Transcript 1 (2) ---------Exon 1.3  PDB: A:12-125 (gaps) UniProt: 10-127 [INCOMPLETE]                                                           ------------------------------------------------------------------------------------Exon 1.5  PDB: A:212-271 UniProt: 212-271                   ------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 3mk6 A   6 LVPRGS-----PWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSN-------IRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDF--IGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGLPN 368
                                 |   - |      20        30        40        50    |    -  |     70        80        90       100       110       120    |  130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360        
                                11    12                                         55      63                                                           125  |                                                                                                                                                                                                                                                
                                                                                                                                                         128                                                                                                                                                                                                                                                

Chain B from PDB  Type:PROTEIN  Length:351
 aligned with PANK3_HUMAN | Q9H999 from UniProtKB/Swiss-Prot  Length:370

    Alignment length:363
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365   
          PANK3_HUMAN     6 AKKPSFPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRTIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGLPN 368
               SCOP domains d3mk6 b1 B:7-154 Pantothenate kinase 3, PANK3                                                                                                          d3mk6b2 B:157-368 Pantothenate kinase 3, PANK3                                                                                                                                                                       SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....-..eeeee...eeeeeeeee....hhhhhhhhhhhhhhhhhhh..-----hhhhhhh..eeeeee..eeeeeeeeeee..hhhhhhhhhhhh.hhhhh.eeeee..hhhhhhh----....eeee.hhhhhhhhhhhhhhhhh.--...eeeee........eeee........eeeeee...eeeeeeee..eeeeeeee..hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.eehhhhhh..hhhhh.....eee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeehhhhh..hhhhhhhhhhhhhhh.....eeee....hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.1a ---------------------------------------------------------------------------------------------------------------------Exon 1.4b  PDB: B:128-212 (gaps) UniProt: 128-212                                    ----------------------------------------------------------Exon 1.6  PDB: B:271-312 UniProt: 271-312 Exon 1.7  PDB: B:313-354 UniProt: 313-354 Exon 1.8b      Transcript 1 (1)
           Transcript 1 (2) ----Exon 1.3  PDB: B:11-123 (gaps) UniProt: 10-127 [INCOMPLETE]                                                           ------------------------------------------------------------------------------------Exon 1.5  PDB: B:212-271 UniProt: 212-271                   ------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 3mk6 B   7 VPRGS-PWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSN-----TGIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYKFEK----IGNLHLHKLDELDCLVKGLLYIDSVSF--QAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGLPN 368
                                | | 15        25        35        45        55     |  65        75        85        95       105       115       | -  |    135       145        |- |     165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365   
                               11 |                                         55    61                                                           123  128                       154  |                                                                                                                                                                                                                   
                                 12                                                                                                                                              157                                                                                                                                                                                                                   

Chain C from PDB  Type:PROTEIN  Length:351
 aligned with PANK3_HUMAN | Q9H999 from UniProtKB/Swiss-Prot  Length:370

    Alignment length:367
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       
          PANK3_HUMAN     1 MKIKDAKKPSFPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRTIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGLP 367
               SCOP domains d3mk6c     1 C:6-156 Pantothenate kinase 3, PANK3                                                                                                           d3mk6c2 C:157-367 Pantothenate kinase 3, PANK3                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......-----..eeeee...eeeeeeeee....hhhhhhhhhhhhhhhhhhh..--------.hhhhheeeeee..eeeeeeeeeee..hhhhhhhhhhhh.hhhhh..eeee..hhhhhhhhh---....eee.hhhhhhhhhhhhhhhhh......eeeee........eeee........eeeeee...eeeeeeee..eeeeeeee..hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.eehhhhhh............eee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeehhhhh.hhhhhhhhhhhhhhhh.....eeee....hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1a ---------------------------------------------------------------------------------------------------------------------Exon 1.4b  PDB: C:129-212 UniProt: 128-212 [INCOMPLETE]                              ----------------------------------------------------------Exon 1.6  PDB: C:271-312 UniProt: 271-312 Exon 1.7  PDB: C:313-354 UniProt: 313-354 Exon 1.8b     Transcript 1 (1)
           Transcript 1 (2) ---------Exon 1.3  PDB: C:12-125 (gaps) UniProt: 10-127 [INCOMPLETE]                                                           ------------------------------------------------------------------------------------Exon 1.5  PDB: C:212-271 UniProt: 212-271                   ------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 3mk6 C   6 LVPRGS-----PWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSN--------RDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDF---GNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGLP 367
                                 |   - |      20        30        40        50    |    -   |    70        80        90       100       110       120    |  130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       
                                11    12                                         55       64                                                          125 129                                                                                                                                                                                                                                              

Chain D from PDB  Type:PROTEIN  Length:345
 aligned with PANK3_HUMAN | Q9H999 from UniProtKB/Swiss-Prot  Length:370

    Alignment length:355
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360     
          PANK3_HUMAN    11 FPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRTIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLG 365
               SCOP domains d3mk6d1 D:11-156 Pantothenate kinase 3, PANK3                                                                                                     d3mk6d2 D:157-365 Pantothenate kinase 3, PANK3                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -Fumble-3mk6D01 D:12-365                                                                                                                                                                                                                                                                                                                                            Pfam domains (1)
           Pfam domains (2) -Fumble-3mk6D02 D:12-365                                                                                                                                                                                                                                                                                                                                            Pfam domains (2)
           Pfam domains (3) -Fumble-3mk6D03 D:12-365                                                                                                                                                                                                                                                                                                                                            Pfam domains (3)
           Pfam domains (4) -Fumble-3mk6D04 D:12-365                                                                                                                                                                                                                                                                                                                                            Pfam domains (4)
         Sec.struct. author ..eeeeee...eeeeeeeee....hhhhhhhhhhhhhhhhhhh..------hhhhhh..eeeeee..eeeeeeeeeee..hhhhhhhhhhhh.....----.....hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhh......eeeee........eeee........eeeeee...eeeeeeee..eeeeeeee..hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.eehhhhhh............eee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeehhhhh..hhhhhhhhhhhhhhh.....eeee....hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) ---------------------------------------------------------------------------------------------------------------------Exon 1.4b  PDB: D:128-212 UniProt: 128-212                                           ----------------------------------------------------------Exon 1.6  PDB: D:271-312 UniProt: 271-312 Exon 1.7  PDB: D:313-354 UniProt: 313-354 Exon 1.8b   Transcript 1 (1)
           Transcript 1 (2) Exon 1.3  PDB: D:11-127 (gaps) UniProt: 10-127 [INCOMPLETE]                                                          ------------------------------------------------------------------------------------Exon 1.5  PDB: D:212-271 UniProt: 212-271                   ---------------------------------------------------------------------------------------------- Transcript 1 (2)
                 3mk6 D  11 SPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSN------GIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTL----CATGGGAYKFEKDFRTIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLG 365
                                    20        30        40        50    |    - |      70        80        90       100      |  - |     120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360     
                                                                       55     62                                          107  112                                                                                                                                                                                                                                                             

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3MK6)

(-) Pfam Domains  (1, 4)

Asymmetric Unit

(-) Gene Ontology  (8, 8)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (PANK3_HUMAN | Q9H999)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0016301    kinase activity    Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0004594    pantothenate kinase activity    Catalysis of the reaction: ATP + pantothenate = ADP + D-4'-phosphopantothenate.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0015937    coenzyme A biosynthetic process    The chemical reactions and pathways resulting in the formation of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.
    GO:0016310    phosphorylation    The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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        PANK3_HUMAN | Q9H999: 2i7p 3sms 5kpr 5kpt 5kpz 5kq8 5kqd

(-) Related Entries Specified in the PDB File

2i7p