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(-) Description

Title :  CRYSTAL STRUCTURE OF THE ATP-BOUND STATE OF WALKER B MUTANT OF NTRC1 ATPASE DOMAIN
 
Authors :  B. Chen, T. A. Sysoeva, S. Chowdhury, M. Rusu, S. Birmanns, L. Guo, J. Han H. Yang, B. T. Nixon
Date :  02 Mar 10  (Deposition) - 03 Nov 10  (Release) - 01 Dec 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.63
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G
Keywords :  Aaa+ Atpase Domain, Gaftga Loop, Arginine Finger, Sigma54 Activator, Bacterial Enhancer Binding Protein, Bacterial Transcription, Two- Component Signal Transduction, Atp-Binding, Dna-Binding, Nucleotide- Binding, Transcription, Transcription Regulation, Molecular Motor (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Chen, T. A. Sysoeva, S. Chowdhury, L. Guo, S. De Carlo, J. A. Hanson, H. Yang, B. T. Nixon
Engagement Of Arginine Finger To Atp Triggers Large Conformational Changes In Ntrc1 Aaa+ Atpase For Remodeling Bacterial Rna Polymerase.
Structure V. 18 1420 2010
PubMed-ID: 21070941  |  Reference-DOI: 10.1016/J.STR.2010.08.018

(-) Compounds

Molecule 1 - TRANSCRIPTIONAL REGULATOR (NTRC FAMILY)
    Chains: A, B, C, D, E, F, G
    EC Number: 3.6.1.3
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Strain: ROSETTA(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: ATP-ASE DOMAIN
    Gene: AQ_1117, NTRC1
    Mutation: YES
    Organism Scientific: AQUIFEX AEOLICUS
    Organism Taxid: 63363

 Structural Features

(-) Chains, Units

  1234567
Asymmetric/Biological Unit : ABCDEFG

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 14)

Asymmetric/Biological Unit (2, 14)
No.NameCountTypeFull Name
1ATP7Ligand/IonADENOSINE-5'-TRIPHOSPHATE
2MG7Ligand/IonMAGNESIUM ION

(-) Sites  (14, 14)

Asymmetric Unit (14, 14)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHOH A:16 , HOH A:49 , HOH A:98 , TYR A:139 , VAL A:140 , SER A:169 , GLY A:170 , VAL A:171 , GLY A:172 , LYS A:173 , GLU A:174 , VAL A:175 , ASN A:280 , LEU A:320 , VAL A:356 , ARG A:357 , MG A:401 , ASP B:295 , ARG B:299BINDING SITE FOR RESIDUE ATP A 400
02AC2SOFTWAREHOH A:16 , GLU A:174 , ASP A:238 , ATP A:400 , HOH A:416BINDING SITE FOR RESIDUE MG A 401
03AC3SOFTWAREHOH B:14 , HOH B:114 , TYR B:139 , VAL B:140 , SER B:169 , GLY B:170 , VAL B:171 , GLY B:172 , LYS B:173 , GLU B:174 , VAL B:175 , ASN B:280 , VAL B:356 , ARG B:357 , MG B:401 , HOH B:427 , ASP C:295 , ARG C:299BINDING SITE FOR RESIDUE ATP B 400
04AC4SOFTWAREHOH B:14 , GLU B:174 , ATP B:400BINDING SITE FOR RESIDUE MG B 401
05AC5SOFTWAREHOH C:19 , HOH C:43 , TYR C:139 , VAL C:140 , SER C:169 , GLY C:170 , VAL C:171 , GLY C:172 , LYS C:173 , GLU C:174 , VAL C:175 , ASN C:280 , VAL C:356 , ARG C:357 , MG C:401 , ASP D:295 , ARG D:299BINDING SITE FOR RESIDUE ATP C 400
06AC6SOFTWAREHOH C:19 , GLU C:174 , ASP C:238 , ATP C:400BINDING SITE FOR RESIDUE MG C 401
07AC7SOFTWARETYR D:139 , VAL D:140 , SER D:169 , GLY D:170 , VAL D:171 , GLY D:172 , LYS D:173 , GLU D:174 , VAL D:175 , ASN D:280 , LEU D:320 , VAL D:356 , ARG D:357 , MG D:401 , HOH D:410 , HOH E:8 , ASP E:295 , ARG E:299BINDING SITE FOR RESIDUE ATP D 400
08AC8SOFTWAREGLU D:174 , ASP D:238 , ATP D:400 , HOH E:8BINDING SITE FOR RESIDUE MG D 401
09AC9SOFTWAREHOH E:6 , HOH E:68 , TYR E:139 , VAL E:140 , SER E:169 , GLY E:170 , VAL E:171 , GLY E:172 , LYS E:173 , GLU E:174 , VAL E:175 , ASN E:280 , LEU E:320 , VAL E:356 , ARG E:357 , HOH E:395 , MG E:401 , ASP F:295 , ARG F:299BINDING SITE FOR RESIDUE ATP E 400
10BC1SOFTWAREHOH E:6 , GLU E:174 , ATP E:400 , HOH E:405 , ARG F:299BINDING SITE FOR RESIDUE MG E 401
11BC2SOFTWAREHOH F:18 , HOH F:40 , TYR F:139 , VAL F:140 , SER F:169 , GLY F:170 , VAL F:171 , GLY F:172 , LYS F:173 , GLU F:174 , VAL F:175 , ASN F:280 , VAL F:356 , ARG F:357 , MG F:401 , ASP G:295 , ARG G:299BINDING SITE FOR RESIDUE ATP F 400
12BC3SOFTWAREHOH F:18 , GLU F:174 , ASP F:238 , ATP F:400 , HOH F:419BINDING SITE FOR RESIDUE MG F 401
13BC4SOFTWAREASP A:295 , ARG A:299 , HOH G:7 , HOH G:35 , TYR G:139 , VAL G:140 , SER G:169 , GLY G:170 , VAL G:171 , GLY G:172 , LYS G:173 , GLU G:174 , VAL G:175 , ASN G:280 , LEU G:320 , VAL G:356 , ARG G:357 , HOH G:388 , MG G:401BINDING SITE FOR RESIDUE ATP G 400
14BC5SOFTWAREHOH G:7 , GLU G:174 , ASP G:238 , ATP G:400 , HOH G:422BINDING SITE FOR RESIDUE MG G 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3M0E)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3M0E)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3M0E)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3M0E)

(-) Exons   (0, 0)

(no "Exon" information available for 3M0E)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:247
 aligned with O67198_AQUAE | O67198 from UniProtKB/TrEMBL  Length:439

    Alignment length:247
                                   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       
         O67198_AQUAE   138 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV 384
               SCOP domains d3m0ea_ A: automated matches                                                                                                                                                                                                                            SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh......eeee.....hhhhhhhhhhhh.......eeeee....hhhhhhhhhhh..............hhhhhh...eeeee.hhhhhhhhhhhhhhhhhhhee........ee...eeeeee..hhhhhhhh...hhhhhhhhh.eeee..hhhhhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhh...hhhhhhhhhhhhhhhhh...eehhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3m0e A 138 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDAIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV 384
                                   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       


Chain B from PDB  Type:PROTEIN  Length:247
 aligned with O67198_AQUAE | O67198 from UniProtKB/TrEMBL  Length:439

    Alignment length:247
                                   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       
         O67198_AQUAE   138 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV 384
               SCOP domains d3m0eb_ B: automated matches                                                                                                                                                                                                                            SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh......eeee.....hhhhhhhhhhhh.......eeeee....hhhhhhhhhhh..............hhhhhh...eeeee.hhhhhhhhhhhhhhhhhhhee........ee...eeeeee..hhhhhhhh...hhhhhhhhh.eeee..hhhhhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhh...hhhhhhhhhhhhhhhhh...eehhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3m0e B 138 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDAIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV 384
                                   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       


Chain C from PDB  Type:PROTEIN  Length:247
 aligned with O67198_AQUAE | O67198 from UniProtKB/TrEMBL  Length:439

    Alignment length:247
                                   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       
         O67198_AQUAE   138 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV 384
               SCOP domains d3m0ec_ C: automated matches                                                                                                                                                                                                                            SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh......eeee.....hhhhhhhhhhhh.......eeeee....hhhhhhhhhhh..............hhhhhh...eeeee.hhhhhhhhhhhhhhhhhhhee........ee...eeeeee..hhhhhhhh...hhhhhhhhh.eeee..hhhhhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhh...hhhhhhhhhhhhhhhhh...eehhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3m0e C 138 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDAIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV 384
                                   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       


Chain D from PDB  Type:PROTEIN  Length:247
 aligned with O67198_AQUAE | O67198 from UniProtKB/TrEMBL  Length:439

    Alignment length:247
                                   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       
         O67198_AQUAE   138 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV 384
               SCOP domains d3m0ed_ D: automated matches                                                                                                                                                                                                                            SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh......eeee.....hhhhhhhhhhhh.......eeeee....hhhhhhhhhhh..............hhhhhh...eeeee.hhhhhhhhhhhhhhhhhhhee........ee...eeeeee..hhhhhhhh...hhhhhhhhh.eeee..hhhhhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhh...hhhhhhhhhhhhhhhhh...eehhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3m0e D 138 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDAIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV 384
                                   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       


Chain E from PDB  Type:PROTEIN  Length:247
 aligned with O67198_AQUAE | O67198 from UniProtKB/TrEMBL  Length:439

    Alignment length:247
                                   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       
         O67198_AQUAE   138 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV 384
               SCOP domains d3m0ee_ E: automated matches                                                                                                                                                                                                                            SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh......eeee.....hhhhhhhhhhhh.......eeeee....hhhhhhhhhhh..............hhhhhh...eeeee.hhhhhhhhhhhhhhhhhhhee........ee...eeeeee..hhhhhhhh...hhhhhhhhh.eeee..hhhhhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhh...hhhhhhhhhhhhhhhhh...eehhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3m0e E 138 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDAIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV 384
                                   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       


Chain F from PDB  Type:PROTEIN  Length:247
 aligned with O67198_AQUAE | O67198 from UniProtKB/TrEMBL  Length:439

    Alignment length:247
                                   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       
         O67198_AQUAE   138 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV 384
               SCOP domains d3m0ef_ F: automated matches                                                                                                                                                                                                                            SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh......eeee.....hhhhhhhhhhhh.......eeeee....hhhhhhhhhhh..............hhhhhh...eeeee.hhhhhhhhhhhhhhhhhhhee........ee...eeeeee..hhhhhhhh...hhhhhhhhh.eeee..hhhhhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhh...hhhhhhhhhhhhhhhhh...eehhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3m0e F 138 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDAIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV 384
                                   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       


Chain G from PDB  Type:PROTEIN  Length:247
 aligned with O67198_AQUAE | O67198 from UniProtKB/TrEMBL  Length:439

    Alignment length:247
                                   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       
         O67198_AQUAE   138 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV 384
               SCOP domains d3m0eg_ G: automated matches                                                                                                                                                                                                                            SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -Sigma54_activat-3m0eG01 G:139-306                                                                                                                                       ------------------------------------------------------------------------------ Pfam domains (1)
           Pfam domains (2) -Sigma54_activat-3m0eG02 G:139-306                                                                                                                                       ------------------------------------------------------------------------------ Pfam domains (2)
           Pfam domains (3) -Sigma54_activat-3m0eG03 G:139-306                                                                                                                                       ------------------------------------------------------------------------------ Pfam domains (3)
           Pfam domains (4) -Sigma54_activat-3m0eG04 G:139-306                                                                                                                                       ------------------------------------------------------------------------------ Pfam domains (4)
           Pfam domains (5) -Sigma54_activat-3m0eG05 G:139-306                                                                                                                                       ------------------------------------------------------------------------------ Pfam domains (5)
           Pfam domains (6) -Sigma54_activat-3m0eG06 G:139-306                                                                                                                                       ------------------------------------------------------------------------------ Pfam domains (6)
           Pfam domains (7) -Sigma54_activat-3m0eG07 G:139-306                                                                                                                                       ------------------------------------------------------------------------------ Pfam domains (7)
         Sec.struct. author .....hhhhhhhhhhhhhh......eeee.....hhhhhhhhhhhh.......eeeee....hhhhhhhhhhh..............hhhhhh...eeeee.hhhhhhhhhhhhhhhhhhhee........ee...eeeeee..hhhhhhhh...hhhhhhhhh.eeee..hhhhhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhh...hhhhhhhhhhhhhhhhh...eehhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3m0e G 138 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDAIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV 384
                                   147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 7)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3M0E)

(-) Pfam Domains  (1, 7)

Asymmetric/Biological Unit
(-)
Clan: P-loop_NTPase (1112)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G   (O67198_AQUAE | O67198)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0003677    DNA binding    Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0043565    sequence-specific DNA binding    Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
    GO:0008134    transcription factor binding    Interacting selectively and non-covalently with a transcription factor, any protein required to initiate or regulate transcription.
biological process
    GO:0000160    phosphorelay signal transduction system    A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.
    GO:0006355    regulation of transcription, DNA-templated    Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
    GO:0006351    transcription, DNA-templated    The cellular synthesis of RNA on a template of DNA.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

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  O67198_AQUAE | O67198
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        O67198_AQUAE | O67198: 1ny5 1ny6 1zy2 4bs1 4bt0 4bt1 4l4u 4l5e 4ly6 4lzz

(-) Related Entries Specified in the PDB File

1ny5 ATPASE AND REGULATORY DOMAINS OF THE NTRC1, DIMERIC INACTIVE FORM
1ny6 WILD TYPE VERSION OF THE SAME PROTEIN (NTRC1 ATPASE DOMAIN) IN THE ADP-BOUND FORM, HEPTAMER
1zy2 PHOSPHORYLATED RECEIVER DOMAIN OF THE FULL LENGTH PROTEIN