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(-) Description

Title :  CRYSTAL STRUCTURE OF THE SHEATH TAIL PROTEIN LIN1278 FROM LISTERIA INNOCUA, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET LKR115
 
Authors :  F. Forouhar, H. Neely, J. Seetharaman, M. Mao, R. Xiao, D. J. Patel, C. Ciccosanti, H. Wang, J. K. Everett, R. Nair, T. B. Acton, B. Rost, G. T. Montelione, J. F. Hunt, L. Tong, Northeast Structural Genomics Consortium (Nesg)
Date :  31 Jan 10  (Deposition) - 09 Mar 10  (Release) - 09 Mar 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.30
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Keywords :  Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Lkr115, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Forouhar, H. Neely, J. Seetharaman, M. Mao, R. Xiao, D. J. Patel, C. Ciccosanti, H. Wang, J. K. Everett, R. Nair, T. B. Acton, B. Rost, G. T. Montelione, J. F. Hunt, L. Tong
Northeast Structural Genomics Consortium Target Lkr115
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - LIN1278 PROTEIN
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)+ MAGIC
    Expression System Taxid: 469008
    Expression System Vector: PET 21-23C
    Gene: LIN1278
    Organism Scientific: LISTERIA INNOCUA
    Organism Taxid: 1642
    Strain: CLIP11262

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): A     
Biological Unit 2 (1x):  B    
Biological Unit 3 (1x):   C   
Biological Unit 4 (1x):    D  
Biological Unit 5 (1x):     E 
Biological Unit 6 (1x):      F

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 24)

Asymmetric Unit (1, 24)
No.NameCountTypeFull Name
1MSE24Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 4)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE
Biological Unit 3 (1, 4)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE
Biological Unit 4 (1, 4)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE
Biological Unit 5 (1, 4)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE
Biological Unit 6 (1, 4)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 3LML)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3LML)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric Unit
No.Residues
1Thr A:301 -Pro A:302
2Thr B:301 -Pro B:302
3Thr C:301 -Pro C:302
4Thr D:301 -Pro D:302
5Thr E:301 -Pro E:302
6Thr F:301 -Pro F:302

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3LML)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3LML)

(-) Exons   (0, 0)

(no "Exon" information available for 3LML)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:440
 aligned with Q92CB1_LISIN | Q92CB1 from UniProtKB/TrEMBL  Length:452

    Alignment length:440
                                                                                                                                                                                                                                                                                                                                                                                                                                                                              452   
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445      |  -
         Q92CB1_LISIN    16 PGIYTNFKAAAAERTKAGERGTVALPLAASWGAAKEFVEINKEEDVEKKLGLSLAHQSFLLLRETLKLAKTVLVYRLNDGIKATATLATDVVVTAKYGGIVGNSITIKVDENVVDSSKKDVTTYLNEVAVDKQVVGTASELIDSNYVSFKTTSTSELQQSSGTTLVGGTDQPVTNLDYTQFLVSAEGEYFDTIAFPVSSSDVALKTSFVSFVKRMRDEQGVKIKGVVANMPADYEGIINVRNGVTLRDGTILEPHQVVAWVAGADASASMLKSNTFVKYDGAIDATPRLANDEAEEALQNGEFVLTFDARDKAVYVEQDLNSLTTFSKEKSSKFRKNKISRILDGINNDTRRNILDAIKERKDANTDIPADENGVQFILSMQTAYLNELQDSGAITNFDSTADITVSLNNNVDGFIVNQSIEPVDSGEKFYFTTEVK---   -
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh.....eeeeeeee.........eeee.hhhhhhhhhh....hhhhhhhhhhhh.eeeeeeee..eee....ee.eeeeeee...hhhhh.eeeeeee.......eeeeeee...eeeeeee.hhhhh.....eeeeeeeeee......ee....eee..hhhhhhhhhhhhhhh...eee......hhhhhhhhhhhhhhhhhh.....eeeee........eeee...eee....eehhhhhhhhhhhhhhhh.............eee.....hhhhhhhhhhh....eeee....eeee..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh...........eeeee.....eeeeeeee........eeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lml A  16 PGIYTNFKAAAAERTKAGERGTVALPLAASWGAAKEFVEINKEEDVEKKLGLSLAHQSFLLLRETLKLAKTVLVYRLNDGIKATATLATDVVVTAKYGGIVGNSITIKVDENVVDSSKKDVTTYLNEVAVDKQVVGTASELIDSNYVSFKTTSTSELQQSSGTTLVGGTDQPVTNLDYTQFLVSAEGEYFDTIAFPVSSSDVALKTSFVSFVKRmRDEQGVKIKGVVANmPADYEGIINVRNGVTLRDGTILEPHQVVAWVAGADASASmLKSNTFVKYDGAIDATPRLANDEAEEALQNGEFVLTFDARDKAVYVEQDLNSLTTFSKEKSSKFRKNKISRILDGINNDTRRNILDAIKERKDANTDIPADENGVQFILSmQTAYLNELQDSGAITNFDSTADITVSLNNNVDGFIVNQSIEPVDSGEKFYFTTEVKLEH 455
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225    |  235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395|      405       415       425       435       445       455
                                                                                                                                                                                                                                                230-MSE        245-MSE                                 285-MSE                                                                                                        396-MSE                                                       


Chain B from PDB  Type:PROTEIN  Length:435
 aligned with Q92CB1_LISIN | Q92CB1 from UniProtKB/TrEMBL  Length:452

    Alignment length:435
                                                                                                                                                                                                                                                                                                                                                                                                                                                                           452 
                                    28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448   | 
         Q92CB1_LISIN    19 YTNFKAAAAERTKAGERGTVALPLAASWGAAKEFVEINKEEDVEKKLGLSLAHQSFLLLRETLKLAKTVLVYRLNDGIKATATLATDVVVTAKYGGIVGNSITIKVDENVVDSSKKDVTTYLNEVAVDKQVVGTASELIDSNYVSFKTTSTSELQQSSGTTLVGGTDQPVTNLDYTQFLVSAEGEYFDTIAFPVSSSDVALKTSFVSFVKRMRDEQGVKIKGVVANMPADYEGIINVRNGVTLRDGTILEPHQVVAWVAGADASASMLKSNTFVKYDGAIDATPRLANDEAEEALQNGEFVLTFDARDKAVYVEQDLNSLTTFSKEKSSKFRKNKISRILDGINNDTRRNILDAIKERKDANTDIPADENGVQFILSMQTAYLNELQDSGAITNFDSTADITVSLNNNVDGFIVNQSIEPVDSGEKFYFTTEVK-   -
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhh.......eeeeee.........eeee.hhhhhhhhhh....hhhhhhhhhhhh...eeeeee..eee....ee.eeeeeee...hhhhh.eeeeeee.......eeeeeee...eeeeeee.hhhhh.....eeeeeeeeee......ee....eee..hhhhhhhhhhhhhhh...eee......hhhhhhhhhhhhhhhhhh.....eeeee........eeee...eee....eehhhhhhhhhhhhhhhh.............eee.....hhhhhhhhhhh....eeee....eeee..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh...........eeeee.....eeeeeeee........eeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lml B  19 YTNFKAAAAERTKAGERGTVALPLAASWGAAKEFVEINKEEDVEKKLGLSLAHQSFLLLRETLKLAKTVLVYRLNDGIKATATLATDVVVTAKYGGIVGNSITIKVDENVVDSSKKDVTTYLNEVAVDKQVVGTASELIDSNYVSFKTTSTSELQQSSGTTLVGGTDQPVTNLDYTQFLVSAEGEYFDTIAFPVSSSDVALKTSFVSFVKRmRDEQGVKIKGVVANmPADYEGIINVRNGVTLRDGTILEPHQVVAWVAGADASASmLKSNTFVKYDGAIDATPRLANDEAEEALQNGEFVLTFDARDKAVYVEQDLNSLTTFSKEKSSKFRKNKISRILDGINNDTRRNILDAIKERKDANTDIPADENGVQFILSmQTAYLNELQDSGAITNFDSTADITVSLNNNVDGFIVNQSIEPVDSGEKFYFTTEVKL 453
                                    28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228 |     238      |248       258       268       278      |288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448     
                                                                                                                                                                                                                                             230-MSE        245-MSE                                 285-MSE                                                                                                        396-MSE                                                     


Chain C from PDB  Type:PROTEIN  Length:438
 aligned with Q92CB1_LISIN | Q92CB1 from UniProtKB/TrEMBL  Length:452

    Alignment length:438
                                                                                                                                                                                                                                                                                                                                                                                                                                                                             452  
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446     |  
         Q92CB1_LISIN    17 GIYTNFKAAAAERTKAGERGTVALPLAASWGAAKEFVEINKEEDVEKKLGLSLAHQSFLLLRETLKLAKTVLVYRLNDGIKATATLATDVVVTAKYGGIVGNSITIKVDENVVDSSKKDVTTYLNEVAVDKQVVGTASELIDSNYVSFKTTSTSELQQSSGTTLVGGTDQPVTNLDYTQFLVSAEGEYFDTIAFPVSSSDVALKTSFVSFVKRMRDEQGVKIKGVVANMPADYEGIINVRNGVTLRDGTILEPHQVVAWVAGADASASMLKSNTFVKYDGAIDATPRLANDEAEEALQNGEFVLTFDARDKAVYVEQDLNSLTTFSKEKSSKFRKNKISRILDGINNDTRRNILDAIKERKDANTDIPADENGVQFILSMQTAYLNELQDSGAITNFDSTADITVSLNNNVDGFIVNQSIEPVDSGEKFYFTTEVK--   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhh.......eeeeeeee.........eeee.hhhhhhhhhh....hhhhhhhhhhhh.eeeeeeee..eee....ee.eeeeeee...hhhhh.eeeeeee.......eeeeeee...eeeeeee.hhhhh.....eeeeeeeeee......ee....eee..hhhhhhhhhhhhhhh...eee......hhhhhhhhhhhhhhhhhh.....eeeee........eeee...eee....eehhhhhhhhhhhhhhhh.............eee.....hhhhhhhhhhh....eeee....eeee..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh...........eeeee.....eeeeeeee........eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3lml C  17 GIYTNFKAAAAERTKAGERGTVALPLAASWGAAKEFVEINKEEDVEKKLGLSLAHQSFLLLRETLKLAKTVLVYRLNDGIKATATLATDVVVTAKYGGIVGNSITIKVDENVVDSSKKDVTTYLNEVAVDKQVVGTASELIDSNYVSFKTTSTSELQQSSGTTLVGGTDQPVTNLDYTQFLVSAEGEYFDTIAFPVSSSDVALKTSFVSFVKRmRDEQGVKIKGVVANmPADYEGIINVRNGVTLRDGTILEPHQVVAWVAGADASASmLKSNTFVKYDGAIDATPRLANDEAEEALQNGEFVLTFDARDKAVYVEQDLNSLTTFSKEKSSKFRKNKISRILDGINNDTRRNILDAIKERKDANTDIPADENGVQFILSmQTAYLNELQDSGAITNFDSTADITVSLNNNVDGFIVNQSIEPVDSGEKFYFTTEVKLE 454
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226   |   236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446        
                                                                                                                                                                                                                                               230-MSE        245-MSE                                 285-MSE                                                                                                        396-MSE                                                      


Chain D from PDB  Type:PROTEIN  Length:434
 aligned with Q92CB1_LISIN | Q92CB1 from UniProtKB/TrEMBL  Length:452

    Alignment length:434
                                                                                                                                                                                                                                                                                                                                                                                                                                                                          452 
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449  | 
         Q92CB1_LISIN    20 TNFKAAAAERTKAGERGTVALPLAASWGAAKEFVEINKEEDVEKKLGLSLAHQSFLLLRETLKLAKTVLVYRLNDGIKATATLATDVVVTAKYGGIVGNSITIKVDENVVDSSKKDVTTYLNEVAVDKQVVGTASELIDSNYVSFKTTSTSELQQSSGTTLVGGTDQPVTNLDYTQFLVSAEGEYFDTIAFPVSSSDVALKTSFVSFVKRMRDEQGVKIKGVVANMPADYEGIINVRNGVTLRDGTILEPHQVVAWVAGADASASMLKSNTFVKYDGAIDATPRLANDEAEEALQNGEFVLTFDARDKAVYVEQDLNSLTTFSKEKSSKFRKNKISRILDGINNDTRRNILDAIKERKDANTDIPADENGVQFILSMQTAYLNELQDSGAITNFDSTADITVSLNNNVDGFIVNQSIEPVDSGEKFYFTTEVK-   -
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhh..........eeeeee.........eeee.hhhhhhhhhh....hhhhhhhhhhhh...eeeeee..eee....ee.eeeeeee...hhhhh.eeeeeee.......eeeeeee...eeeeeee.hhhhh.....eeeeeeeeee......ee....eee..hhhhhhhhhhhhhhh...eee......hhhhhhhhhhhhhhhhhh.....eeeee........eeee...eee....eehhhhhhhhhhhhhhhh.............eee.....hhhhhhhhhhh....eeee....eeee..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh...........eeeee......eeeeeee........eeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lml D  20 TNFKAAAAERTKAGERGTVALPLAASWGAAKEFVEINKEEDVEKKLGLSLAHQSFLLLRETLKLAKTVLVYRLNDGIKATATLATDVVVTAKYGGIVGNSITIKVDENVVDSSKKDVTTYLNEVAVDKQVVGTASELIDSNYVSFKTTSTSELQQSSGTTLVGGTDQPVTNLDYTQFLVSAEGEYFDTIAFPVSSSDVALKTSFVSFVKRmRDEQGVKIKGVVANmPADYEGIINVRNGVTLRDGTILEPHQVVAWVAGADASASmLKSNTFVKYDGAIDATPRLANDEAEEALQNGEFVLTFDARDKAVYVEQDLNSLTTFSKEKSSKFRKNKISRILDGINNDTRRNILDAIKERKDANTDIPADENGVQFILSmQTAYLNELQDSGAITNFDSTADITVSLNNNVDGFIVNQSIEPVDSGEKFYFTTEVKL 453
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229|      239     | 249       259       269       279     | 289       299       309       319       329       339       349       359       369       379       389      |399       409       419       429       439       449    
                                                                                                                                                                                                                                            230-MSE        245-MSE                                 285-MSE                                                                                                        396-MSE                                                     


Chain E from PDB  Type:PROTEIN  Length:431
 aligned with Q92CB1_LISIN | Q92CB1 from UniProtKB/TrEMBL  Length:452

    Alignment length:431
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450 
         Q92CB1_LISIN    21 NFKAAAAERTKAGERGTVALPLAASWGAAKEFVEINKEEDVEKKLGLSLAHQSFLLLRETLKLAKTVLVYRLNDGIKATATLATDVVVTAKYGGIVGNSITIKVDENVVDSSKKDVTTYLNEVAVDKQVVGTASELIDSNYVSFKTTSTSELQQSSGTTLVGGTDQPVTNLDYTQFLVSAEGEYFDTIAFPVSSSDVALKTSFVSFVKRMRDEQGVKIKGVVANMPADYEGIINVRNGVTLRDGTILEPHQVVAWVAGADASASMLKSNTFVKYDGAIDATPRLANDEAEEALQNGEFVLTFDARDKAVYVEQDLNSLTTFSKEKSSKFRKNKISRILDGINNDTRRNILDAIKERKDANTDIPADENGVQFILSMQTAYLNELQDSGAITNFDSTADITVSLNNNVDGFIVNQSIEPVDSGEKFYFTTEV 451
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhh...eeeeeeee.........eeee.hhhhhhhhhh....hhhhhhhhhhhh.eeeeeeee..eee....ee.eeeeeee...hhhhh.eeeeeee.......eeeeeee...eeeeeee.hhhhh.....eeeeeeeeee......ee....eee..hhhhhhhhhhhhhhh...eee......hhhhhhhhhhhhhhhhhh.....eeeee........eeee..eeee....eehhhhhhhhhhhhhhhh.............eeeee...hhhhhhhhhhh....eeee....eeee..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh...........eeeee......eeeeeee........eeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lml E  21 NFKAAAAERTKAGERGTVALPLAASWGAAKEFVEINKEEDVEKKLGLSLAHQSFLLLRETLKLAKTVLVYRLNDGIKATATLATDVVVTAKYGGIVGNSITIKVDENVVDSSKKDVTTYLNEVAVDKQVVGTASELIDSNYVSFKTTSTSELQQSSGTTLVGGTDQPVTNLDYTQFLVSAEGEYFDTIAFPVSSSDVALKTSFVSFVKRmRDEQGVKIKGVVANmPADYEGIINVRNGVTLRDGTILEPHQVVAWVAGADASASmLKSNTFVKYDGAIDATPRLANDEAEEALQNGEFVLTFDARDKAVYVEQDLNSLTTFSKEKSSKFRKNKISRILDGINNDTRRNILDAIKERKDANTDIPADENGVQFILSmQTAYLNELQDSGAITNFDSTADITVSLNNNVDGFIVNQSIEPVDSGEKFYFTTEV 451
                                    30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240    |  250       260       270       280    |  290       300       310       320       330       340       350       360       370       380       390     | 400       410       420       430       440       450 
                                                                                                                                                                                                                                           230-MSE        245-MSE                                 285-MSE                                                                                                        396-MSE                                                   


Chain F from PDB  Type:PROTEIN  Length:435
 aligned with Q92CB1_LISIN | Q92CB1 from UniProtKB/TrEMBL  Length:452

    Alignment length:435
                                                                                                                                                                                                                                                                                                                                                                                                                                                                          452  
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449  |  
         Q92CB1_LISIN    20 TNFKAAAAERTKAGERGTVALPLAASWGAAKEFVEINKEEDVEKKLGLSLAHQSFLLLRETLKLAKTVLVYRLNDGIKATATLATDVVVTAKYGGIVGNSITIKVDENVVDSSKKDVTTYLNEVAVDKQVVGTASELIDSNYVSFKTTSTSELQQSSGTTLVGGTDQPVTNLDYTQFLVSAEGEYFDTIAFPVSSSDVALKTSFVSFVKRMRDEQGVKIKGVVANMPADYEGIINVRNGVTLRDGTILEPHQVVAWVAGADASASMLKSNTFVKYDGAIDATPRLANDEAEEALQNGEFVLTFDARDKAVYVEQDLNSLTTFSKEKSSKFRKNKISRILDGINNDTRRNILDAIKERKDANTDIPADENGVQFILSMQTAYLNELQDSGAITNFDSTADITVSLNNNVDGFIVNQSIEPVDSGEKFYFTTEVK--   -
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) Phage_sheath_1-3lmlF01 F:20-452                                                                                                                                                                                                                                                                                                                                                                                                                  -- Pfam domains (1)
           Pfam domains (2) Phage_sheath_1-3lmlF02 F:20-452                                                                                                                                                                                                                                                                                                                                                                                                                  -- Pfam domains (2)
           Pfam domains (3) Phage_sheath_1-3lmlF03 F:20-452                                                                                                                                                                                                                                                                                                                                                                                                                  -- Pfam domains (3)
           Pfam domains (4) Phage_sheath_1-3lmlF04 F:20-452                                                                                                                                                                                                                                                                                                                                                                                                                  -- Pfam domains (4)
           Pfam domains (5) Phage_sheath_1-3lmlF05 F:20-452                                                                                                                                                                                                                                                                                                                                                                                                                  -- Pfam domains (5)
           Pfam domains (6) Phage_sheath_1-3lmlF06 F:20-452                                                                                                                                                                                                                                                                                                                                                                                                                  -- Pfam domains (6)
         Sec.struct. author hhhhhhhhhhhh.....eeeeee.........eeee.hhhhhhhhhh....hhhhhhhhhhhh...eeeeee..eee....ee.eeeeeee...hhhhh.eeeeeee.......eeeeeee...eeeeeee.hhhhh.....eeeeeeeeee......ee....eee..hhhhhhhhhhhhhhh...eee......hhhhhhhhhhhhhhhhhh.....eeeee........eeee...eee....eehhhhhhhhhhhhhhhh.............eee.....hhhhhhhhhhh....eeee....eeee...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh...........eeeee.....eeeeeeee........eeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lml F  20 TNFKAAAAERTKAGERGTVALPLAASWGAAKEFVEINKEEDVEKKLGLSLAHQSFLLLRETLKLAKTVLVYRLNDGIKATATLATDVVVTAKYGGIVGNSITIKVDENVVDSSKKDVTTYLNEVAVDKQVVGTASELIDSNYVSFKTTSTSELQQSSGTTLVGGTDQPVTNLDYTQFLVSAEGEYFDTIAFPVSSSDVALKTSFVSFVKRmRDEQGVKIKGVVANmPADYEGIINVRNGVTLRDGTILEPHQVVAWVAGADASASmLKSNTFVKYDGAIDATPRLANDEAEEALQNGEFVLTFDARDKAVYVEQDLNSLTTFSKEKSSKFRKNKISRILDGINNDTRRNILDAIKERKDANTDIPADENGVQFILSmQTAYLNELQDSGAITNFDSTADITVSLNNNVDGFIVNQSIEPVDSGEKFYFTTEVKLE 454
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229|      239     | 249       259       269       279     | 289       299       309       319       329       339       349       359       369       379       389      |399       409       419       429       439       449     
                                                                                                                                                                                                                                            230-MSE        245-MSE                                 285-MSE                                                                                                        396-MSE
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(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3LML)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3LML)

(-) Pfam Domains  (1, 6)

Asymmetric Unit
(-)
Clan: no clan defined [family: Phage_sheath_1] (1)

(-) Gene Ontology  (0, 0)

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  3lml
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  Q92CB1_LISIN | Q92CB1
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  Q92CB1_LISIN | Q92CB1
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 Related Entries

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