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(-) Description

Title :  CRYSTAL STRUCTURE OF TYPE-III SECRETION CHAPERONE IPGC FROM SHIGELLA FLEXNERI (RESIDUES 10-155)
 
Authors :  B. V. Geisbrecht, M. L. Barta
Date :  20 Nov 09  (Deposition) - 25 Aug 10  (Release) - 25 Aug 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.30
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Biol. Unit 5:  I,J  (1x)
Biol. Unit 6:  K,L  (1x)
Biol. Unit 7:  M,N  (1x)
Biol. Unit 8:  O,P  (1x)
Biol. Unit 9:  Q,R  (1x)
Keywords :  Tpr Motif, Chaperone, Virulence (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. L. Barta, L. Zhang, W. L. Picking, B. V. Geisbrecht
Evidence For Alternative Quaternary Structure In A Bacteria Type Iii Secretion System Chaperone
Bmc Struct. Biol. V. 10 21 2010
PubMed-ID: 20633281  |  Reference-DOI: 10.1186/1472-6807-10-21

(-) Compounds

Molecule 1 - CHAPERONE PROTEIN IPGC
    ChainsA, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPT7HMT
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    FragmentRESIDUES 10-155
    GeneIPGC
    Organism ScientificSHIGELLA FLEXNERI
    Organism Taxid623

 Structural Features

(-) Chains, Units

  123456789101112131415161718
Asymmetric Unit ABCDEFGHIJKLMNOPQR
Biological Unit 1 (1x)AB                
Biological Unit 2 (1x)  CD              
Biological Unit 3 (1x)    EF            
Biological Unit 4 (1x)      GH          
Biological Unit 5 (1x)        IJ        
Biological Unit 6 (1x)          KL      
Biological Unit 7 (1x)            MN    
Biological Unit 8 (1x)              OP  
Biological Unit 9 (1x)                QR

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3KS2)

(-) Sites  (0, 0)

(no "Site" information available for 3KS2)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3KS2)

(-) Cis Peptide Bonds  (35, 35)

Asymmetric Unit
No.Residues
1Leu A:25 -Lys A:26
2Leu B:25 -Lys B:26
3Asp B:27 -Ile B:28
4Leu C:25 -Lys C:26
5Asp C:27 -Ile C:28
6Leu D:25 -Lys D:26
7Asp D:27 -Ile D:28
8Leu E:25 -Lys E:26
9Asp E:27 -Ile E:28
10Leu F:25 -Lys F:26
11Asp F:27 -Ile F:28
12Leu G:25 -Lys G:26
13Asp G:27 -Ile G:28
14Leu H:25 -Lys H:26
15Asp H:27 -Ile H:28
16Leu I:25 -Lys I:26
17Asp I:27 -Ile I:28
18Leu J:25 -Lys J:26
19Asp J:27 -Ile J:28
20Leu K:25 -Lys K:26
21Asp K:27 -Ile K:28
22Leu L:25 -Lys L:26
23Asp L:27 -Ile L:28
24Leu M:25 -Lys M:26
25Asp M:27 -Ile M:28
26Leu N:25 -Lys N:26
27Asp N:27 -Ile N:28
28Leu O:25 -Lys O:26
29Asp O:27 -Ile O:28
30Leu P:25 -Lys P:26
31Asp P:27 -Ile P:28
32Leu Q:25 -Lys Q:26
33Asp Q:27 -Ile Q:28
34Leu R:25 -Lys R:26
35Asp R:27 -Ile R:28

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3KS2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3KS2)

(-) Exons   (0, 0)

(no "Exon" information available for 3KS2)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 A  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain B from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 B  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain C from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 C  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain D from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 D  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain E from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 E  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain F from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 F  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain G from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 G  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain H from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 H  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain I from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 I  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain J from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 J  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain K from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 K  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain L from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 L  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain M from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 M  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain N from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 N  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain O from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 O  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain P from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 P  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain Q from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 Q  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

Chain R from PDB  Type:PROTEIN  Length:137
 aligned with IPGC_SHIFL | P0A2U4 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:137
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       
           IPGC_SHIFL    18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ----------------------------------------------------TPR_3-3ks2R01 R:70-103            --------------------------------------------------- Pfam domains (1)
           Pfam domains (2) ----------------------------------------------------TPR_3-3ks2R02 R:70-103            --------------------------------------------------- Pfam domains (2)
           Pfam domains (3) ----------------------------------------------------TPR_3-3ks2R03 R:70-103            --------------------------------------------------- Pfam domains (3)
           Pfam domains (4) ----------------------------------------------------TPR_3-3ks2R04 R:70-103            --------------------------------------------------- Pfam domains (4)
           Pfam domains (5) ----------------------------------------------------TPR_3-3ks2R05 R:70-103            --------------------------------------------------- Pfam domains (5)
           Pfam domains (6) ----------------------------------------------------TPR_3-3ks2R06 R:70-103            --------------------------------------------------- Pfam domains (6)
           Pfam domains (7) ----------------------------------------------------TPR_3-3ks2R07 R:70-103            --------------------------------------------------- Pfam domains (7)
           Pfam domains (8) ----------------------------------------------------TPR_3-3ks2R08 R:70-103            --------------------------------------------------- Pfam domains (8)
           Pfam domains (9) ----------------------------------------------------TPR_3-3ks2R09 R:70-103            --------------------------------------------------- Pfam domains (9)
          Pfam domains (10) ----------------------------------------------------TPR_3-3ks2R10 R:70-103            --------------------------------------------------- Pfam domains (10)
          Pfam domains (11) ----------------------------------------------------TPR_3-3ks2R11 R:70-103            --------------------------------------------------- Pfam domains (11)
          Pfam domains (12) ----------------------------------------------------TPR_3-3ks2R12 R:70-103            --------------------------------------------------- Pfam domains (12)
          Pfam domains (13) ----------------------------------------------------TPR_3-3ks2R13 R:70-103            --------------------------------------------------- Pfam domains (13)
          Pfam domains (14) ----------------------------------------------------TPR_3-3ks2R14 R:70-103            --------------------------------------------------- Pfam domains (14)
          Pfam domains (15) ----------------------------------------------------TPR_3-3ks2R15 R:70-103            --------------------------------------------------- Pfam domains (15)
          Pfam domains (16) ----------------------------------------------------TPR_3-3ks2R16 R:70-103            --------------------------------------------------- Pfam domains (16)
          Pfam domains (17) ----------------------------------------------------TPR_3-3ks2R17 R:70-103            --------------------------------------------------- Pfam domains (17)
          Pfam domains (18) ----------------------------------------------------TPR_3-3ks2R18 R:70-103            --------------------------------------------------- Pfam domains (18)
          Pfam domains (19) ----------------------------------------------------TPR_3-3ks2R19 R:70-103            --------------------------------------------------- Pfam domains (19)
          Pfam domains (20) ----------------------------------------------------TPR_3-3ks2R20 R:70-103            --------------------------------------------------- Pfam domains (20)
          Pfam domains (21) ----------------------------------------------------TPR_3-3ks2R21 R:70-103            --------------------------------------------------- Pfam domains (21)
          Pfam domains (22) ----------------------------------------------------TPR_3-3ks2R22 R:70-103            --------------------------------------------------- Pfam domains (22)
          Pfam domains (23) ----------------------------------------------------TPR_3-3ks2R23 R:70-103            --------------------------------------------------- Pfam domains (23)
          Pfam domains (24) ----------------------------------------------------TPR_3-3ks2R24 R:70-103            --------------------------------------------------- Pfam domains (24)
          Pfam domains (25) ----------------------------------------------------TPR_3-3ks2R25 R:70-103            --------------------------------------------------- Pfam domains (25)
          Pfam domains (26) ----------------------------------------------------TPR_3-3ks2R26 R:70-103            --------------------------------------------------- Pfam domains (26)
          Pfam domains (27) ----------------------------------------------------TPR_3-3ks2R27 R:70-103            --------------------------------------------------- Pfam domains (27)
          Pfam domains (28) ----------------------------------------------------TPR_3-3ks2R28 R:70-103            --------------------------------------------------- Pfam domains (28)
          Pfam domains (29) ----------------------------------------------------TPR_3-3ks2R29 R:70-103            --------------------------------------------------- Pfam domains (29)
          Pfam domains (30) ----------------------------------------------------TPR_3-3ks2R30 R:70-103            --------------------------------------------------- Pfam domains (30)
          Pfam domains (31) ----------------------------------------------------TPR_3-3ks2R31 R:70-103            --------------------------------------------------- Pfam domains (31)
          Pfam domains (32) ----------------------------------------------------TPR_3-3ks2R32 R:70-103            --------------------------------------------------- Pfam domains (32)
          Pfam domains (33) ----------------------------------------------------TPR_3-3ks2R33 R:70-103            --------------------------------------------------- Pfam domains (33)
          Pfam domains (34) ----------------------------------------------------TPR_3-3ks2R34 R:70-103            --------------------------------------------------- Pfam domains (34)
          Pfam domains (35) ----------------------------------------------------TPR_3-3ks2R35 R:70-103            --------------------------------------------------- Pfam domains (35)
          Pfam domains (36) ----------------------------------------------------TPR_3-3ks2R36 R:70-103            --------------------------------------------------- Pfam domains (36)
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ks2 R  18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIK 154
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3KS2)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3KS2)

(-) Pfam Domains  (1, 36)

Asymmetric Unit
(-)
Clan: TPR (230)
1aTPR_3-3ks2R01R:70-103
1bTPR_3-3ks2R02R:70-103
1cTPR_3-3ks2R03R:70-103
1dTPR_3-3ks2R04R:70-103
1eTPR_3-3ks2R05R:70-103
1fTPR_3-3ks2R06R:70-103
1gTPR_3-3ks2R07R:70-103
1hTPR_3-3ks2R08R:70-103
1iTPR_3-3ks2R09R:70-103
1jTPR_3-3ks2R10R:70-103
1kTPR_3-3ks2R11R:70-103
1lTPR_3-3ks2R12R:70-103
1mTPR_3-3ks2R13R:70-103
1nTPR_3-3ks2R14R:70-103
1oTPR_3-3ks2R15R:70-103
1pTPR_3-3ks2R16R:70-103
1qTPR_3-3ks2R17R:70-103
1rTPR_3-3ks2R18R:70-103
1sTPR_3-3ks2R19R:70-103
1tTPR_3-3ks2R20R:70-103
1uTPR_3-3ks2R21R:70-103
1vTPR_3-3ks2R22R:70-103
1wTPR_3-3ks2R23R:70-103
1xTPR_3-3ks2R24R:70-103
1yTPR_3-3ks2R25R:70-103
1zTPR_3-3ks2R26R:70-103
1aaTPR_3-3ks2R27R:70-103
1abTPR_3-3ks2R28R:70-103
1acTPR_3-3ks2R29R:70-103
1adTPR_3-3ks2R30R:70-103
1aeTPR_3-3ks2R31R:70-103
1afTPR_3-3ks2R32R:70-103
1agTPR_3-3ks2R33R:70-103
1ahTPR_3-3ks2R34R:70-103
1aiTPR_3-3ks2R35R:70-103
1ajTPR_3-3ks2R36R:70-103

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R   (IPGC_SHIFL | P0A2U4)
biological process
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
    GO:0006950    response to stress    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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  Cis Peptide Bonds
    Asp B:27 - Ile B:28   [ RasMol ]  
    Asp C:27 - Ile C:28   [ RasMol ]  
    Asp D:27 - Ile D:28   [ RasMol ]  
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    Asp L:27 - Ile L:28   [ RasMol ]  
    Asp M:27 - Ile M:28   [ RasMol ]  
    Asp N:27 - Ile N:28   [ RasMol ]  
    Asp O:27 - Ile O:28   [ RasMol ]  
    Asp P:27 - Ile P:28   [ RasMol ]  
    Asp Q:27 - Ile Q:28   [ RasMol ]  
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        IPGC_SHIFL | P0A2U43gyz 3gz1 3gz2

(-) Related Entries Specified in the PDB File

3gyz CRYSTAL STRUCTURE OF IPGC FROM SHIGELLA FLEXNERI [CHAPERONE]