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(-) Description

Title :  X-RAY STRUCTURE OF R[CGCG(5-FLUORO)CG]2
 
Authors :  D. A. Adamiak, J. Milecki, R. W. Adamiak, W. Rypniewski
Date :  21 Sep 09  (Deposition) - 09 Feb 10  (Release) - 09 Sep 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.25
Chains :  Asym. Unit :  A,B,K
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  K  (2x)
Keywords :  Rna, Double Helix (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  D. A. Adamiak, J. Milecki, R. W. Adamiak, W. Rypniewski
The Hydration And Unusual Hydrogen Bonding In The Crystal Structure Of An Rna Duplex Containing Alternating Cg Base Pairs
New J. Chem. V. 34 903 2010
PubMed: search  |  Reference-DOI: 10.1039/B9NJ00601J

(-) Compounds

Molecule 1 - R[CGCG(5-FLUORO)CG]2
    ChainsA, B, K
    EngineeredYES
    Other DetailsTHIS IS A MODIFICATION OF A NATURALLY OCCURING SEQUENCE
    SyntheticYES

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit ABK
Biological Unit 1 (1x)AB 
Biological Unit 2 (2x)  K

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric Unit (1, 3)
No.NameCountTypeFull Name
15CF3Mod. Nucleotide5-FLUOROCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
15CF2Mod. Nucleotide5-FLUOROCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
15CF2Mod. Nucleotide5-FLUOROCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)

(-) Sites  (0, 0)

(no "Site" information available for 3JXR)

(-) SS Bonds  (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:RNA  Length:6
                                    
                   3jxr A 1 CGCGxG 6
                                | 
                                | 
                                5-5CF

Chain B from PDB  Type:RNA  Length:6
                                    
                   3jxr B 1 CGCGxG 6
                                | 
                                5-5CF

Chain K from PDB  Type:RNA  Length:6
                                    
                   3jxr K 1 CGCGxG 6
                                | 
                                5-5CF

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(-) Gene Ontology  (0, 0)

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3jxq