No.	Name	Count	Type	Full Name
1	MG	24	Ligand/Ion	MAGNESIUM ION
2	ZN	24	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Count	Type	Full Name
1	MG	-1	Ligand/Ion	MAGNESIUM ION
2	ZN	-1	Ligand/Ion	ZINC ION

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	HIS A:12 , HIS A:16 , CYS A:40 , CYS A:43	BINDING SITE FOR RESIDUE ZN A 210
02	AC2	SOFTWARE	ASP A:64 , ASP A:116	BINDING SITE FOR RESIDUE MG A 211
03	AC3	SOFTWARE	HIS B:12 , HIS B:16 , CYS B:40 , CYS B:43	BINDING SITE FOR RESIDUE ZN B 210
04	AC4	SOFTWARE	ASP B:64 , ASP B:116 , GLU e:375	BINDING SITE FOR RESIDUE MG B 211
05	AC5	SOFTWARE	HIS E:12 , HIS E:16 , CYS E:40 , CYS E:43	BINDING SITE FOR RESIDUE ZN E 210
06	AC6	SOFTWARE	ASP E:64 , ASP E:116	BINDING SITE FOR RESIDUE MG E 211
07	AC7	SOFTWARE	HIS F:12 , HIS F:16 , CYS F:40 , CYS F:43	BINDING SITE FOR RESIDUE ZN F 210
08	AC8	SOFTWARE	ASP F:64 , ASP F:116	BINDING SITE FOR RESIDUE MG F 211
09	AC9	SOFTWARE	HIS I:12 , HIS I:16 , CYS I:40 , CYS I:43	BINDING SITE FOR RESIDUE ZN I 210
10	BC1	SOFTWARE	ASP I:64 , ASP I:116	BINDING SITE FOR RESIDUE MG I 211
11	BC2	SOFTWARE	HIS J:12 , HIS J:16 , CYS J:40 , CYS J:43	BINDING SITE FOR RESIDUE ZN J 210
12	BC3	SOFTWARE	ASP J:64 , ASP J:116 , GLU W:375	BINDING SITE FOR RESIDUE MG J 211
13	BC4	SOFTWARE	HIS M:12 , HIS M:16 , CYS M:40 , CYS M:43	BINDING SITE FOR RESIDUE ZN M 210
14	BC5	SOFTWARE	ASP M:64 , ASP M:116	BINDING SITE FOR RESIDUE MG M 211
15	BC6	SOFTWARE	HIS N:12 , HIS N:16 , CYS N:40 , CYS N:43	BINDING SITE FOR RESIDUE ZN N 210
16	BC7	SOFTWARE	GLU G:375 , ASP N:64 , CYS N:65 , ASP N:116	BINDING SITE FOR RESIDUE MG N 211
17	BC8	SOFTWARE	HIS Q:12 , HIS Q:16 , CYS Q:40 , CYS Q:43	BINDING SITE FOR RESIDUE ZN Q 210
18	BC9	SOFTWARE	ASP Q:64 , ASP Q:116	BINDING SITE FOR RESIDUE MG Q 211
19	CC1	SOFTWARE	HIS R:12 , HIS R:16 , CYS R:40 , CYS R:43	BINDING SITE FOR RESIDUE ZN R 210
20	CC2	SOFTWARE	ASP R:64 , ASP R:116	BINDING SITE FOR RESIDUE MG R 211
21	CC3	SOFTWARE	HIS U:12 , HIS U:16 , CYS U:40 , CYS U:43	BINDING SITE FOR RESIDUE ZN U 210
22	CC4	SOFTWARE	ASP U:64 , ASP U:116	BINDING SITE FOR RESIDUE MG U 211
23	CC5	SOFTWARE	HIS V:12 , HIS V:16 , CYS V:40 , CYS V:43	BINDING SITE FOR RESIDUE ZN V 210
24	CC6	SOFTWARE	ASP V:64 , ASP V:116	BINDING SITE FOR RESIDUE MG V 211
25	CC7	SOFTWARE	HIS Y:12 , HIS Y:16 , CYS Y:40 , CYS Y:43	BINDING SITE FOR RESIDUE ZN Y 210
26	CC8	SOFTWARE	ASP Y:64 , ASP Y:116	BINDING SITE FOR RESIDUE MG Y 211
27	CC9	SOFTWARE	HIS Z:12 , HIS Z:16 , CYS Z:40 , CYS Z:43	BINDING SITE FOR RESIDUE ZN Z 210
28	DC1	SOFTWARE	ASP Z:64 , ASP Z:116	BINDING SITE FOR RESIDUE MG Z 211
29	DC2	SOFTWARE	HIS c:12 , HIS c:16 , CYS c:40 , CYS c:43	BINDING SITE FOR RESIDUE ZN c 210
30	DC3	SOFTWARE	ASP c:64 , ASP c:116	BINDING SITE FOR RESIDUE MG c 211
31	DC4	SOFTWARE	HIS d:12 , HIS d:16 , CYS d:40 , CYS d:43	BINDING SITE FOR RESIDUE ZN d 210
32	DC5	SOFTWARE	ASP d:64 , ASP d:116	BINDING SITE FOR RESIDUE MG d 211
33	DC6	SOFTWARE	HIS g:12 , HIS g:16 , CYS g:40 , CYS g:43	BINDING SITE FOR RESIDUE ZN g 210
34	DC7	SOFTWARE	ASP g:64 , ASP g:116	BINDING SITE FOR RESIDUE MG g 211
35	DC8	SOFTWARE	HIS h:12 , HIS h:16 , CYS h:40 , CYS h:43	BINDING SITE FOR RESIDUE ZN h 210
36	DC9	SOFTWARE	ASP h:64 , ASP h:116	BINDING SITE FOR RESIDUE MG h 211
37	EC1	SOFTWARE	HIS k:12 , HIS k:16 , CYS k:40 , CYS k:43	BINDING SITE FOR RESIDUE ZN k 210
38	EC2	SOFTWARE	ASP k:64 , ASP k:116	BINDING SITE FOR RESIDUE MG k 211
39	EC3	SOFTWARE	HIS l:12 , HIS l:16 , CYS l:40 , CYS l:43	BINDING SITE FOR RESIDUE ZN l 210
40	EC4	SOFTWARE	GLU S:375 , ASP l:64 , ASP l:116	BINDING SITE FOR RESIDUE MG l 211
41	EC5	SOFTWARE	HIS o:12 , HIS o:16 , CYS o:40 , CYS o:43	BINDING SITE FOR RESIDUE ZN o 210
42	EC6	SOFTWARE	ASP o:64 , ASP o:116	BINDING SITE FOR RESIDUE MG o 211
43	EC7	SOFTWARE	HIS p:12 , HIS p:16 , CYS p:40 , CYS p:43	BINDING SITE FOR RESIDUE ZN p 210
44	EC8	SOFTWARE	ASP p:64 , ASP p:116	BINDING SITE FOR RESIDUE MG p 211
45	EC9	SOFTWARE	HIS s:12 , HIS s:16 , CYS s:40 , CYS s:43	BINDING SITE FOR RESIDUE ZN s 210
46	FC1	SOFTWARE	ASP s:64 , ASP s:116	BINDING SITE FOR RESIDUE MG s 211
47	FC2	SOFTWARE	HIS t:12 , HIS t:16 , CYS t:40 , CYS t:43	BINDING SITE FOR RESIDUE ZN t 210
48	FC3	SOFTWARE	ASP t:64 , ASP t:116	BINDING SITE FOR RESIDUE MG t 211

No.	Residues
1	Val A:141	-	Pro A:142
2	Val E:141	-	Pro E:142
3	Val I:141	-	Pro I:142
4	Val M:141	-	Pro M:142
5	Val Q:141	-	Pro Q:142
6	Val U:141	-	Pro U:142
7	Val Y:141	-	Pro Y:142
8	Val c:141	-	Pro c:142
9	Val g:141	-	Pro g:142
10	Val k:141	-	Pro k:142
11	Val o:141	-	Pro o:142
12	Val s:141	-	Pro s:142

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	12	B:3-43 F:3-43 J:3-43 N:3-43 R:3-43 V:3-43 Z:3-43 d:3-43 h:3-43 l:3-43 p:3-43 t:3-43
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	24	A:53-204 B:54-204 E:53-204 F:54-204 I:53-204 J:54-204 M:53-204 N:54-204 Q:53-204 R:54-204 U:53-204 V:54-204 Y:53-204 Z:54-204 c:53-204 d:54-204 g:53-204 h:54-204 k:53-204 l:54-204 o:53-204 p:54-204 s:53-204 t:54-204

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	1	B:3-43 - - - - - - - - - - -
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	2	A:53-204 B:54-204 - - - - - - - - - - - - - - - - - - - - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	1	- F:3-43 - - - - - - - - - -
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	2	- - E:53-204 F:54-204 - - - - - - - - - - - - - - - - - - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	1	- - J:3-43 - - - - - - - - -
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	2	- - - - I:53-204 J:54-204 - - - - - - - - - - - - - - - - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	1	- - - N:3-43 - - - - - - - -
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	2	- - - - - - M:53-204 N:54-204 - - - - - - - - - - - - - - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	1	- - - - R:3-43 - - - - - - -
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	2	- - - - - - - - Q:53-204 R:54-204 - - - - - - - - - - - - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	1	- - - - - V:3-43 - - - - - -
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	2	- - - - - - - - - - U:53-204 V:54-204 - - - - - - - - - - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	1	- - - - - - Z:3-43 - - - - -
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	2	- - - - - - - - - - - - Y:53-204 Z:54-204 - - - - - - - - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	1	- - - - - - - d:3-43 - - - -
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	2	- - - - - - - - - - - - - - c:53-204 d:54-204 - - - - - - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	1	- - - - - - - - h:3-43 - - -
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	2	- - - - - - - - - - - - - - - - g:53-204 h:54-204 - - - - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	1	- - - - - - - - - l:3-43 - -
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	2	- - - - - - - - - - - - - - - - - - k:53-204 l:54-204 - - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	1	- - - - - - - - - - p:3-43 -
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	2	- - - - - - - - - - - - - - - - - - - - o:53-204 p:54-204 - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	1	- - - - - - - - - - - t:3-43
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	2	- - - - - - - - - - - - - - - - - - - - - - s:53-204 t:54-204

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	3	- F:3-43 - - - V:3-43 - - h:3-43 - - -
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	6	- - E:53-204 F:54-204 - - - - - - U:53-204 V:54-204 - - - - g:53-204 h:54-204 - - - - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	3	B:3-43 - J:3-43 - - - Z:3-43 - - - - -
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	6	A:53-204 B:54-204 - - I:53-204 J:54-204 - - - - - - Y:53-204 Z:54-204 - - - - - - - - - -

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	3	- - - - - - - - - l:3-43 p:3-43 t:3-43
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	6	- - - - - - - - - - - - - - - - - - k:53-204 l:54-204 o:53-204 p:54-204 s:53-204 t:54-204

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZF_INTEGRASE	PS50876	Zinc finger integrase-type profile.	POL_HV2RO	1174-1215	3	- - - N:3-43 R:3-43 - - d:3-43 - - - -
2	INTEGRASE	PS50994	Integrase catalytic domain profile.	POL_HV2RO	1224-1375	6	- - - - - - M:53-204 N:54-204 Q:53-204 R:54-204 - - - - c:53-204 d:54-204 - - - - - - - -

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1b	ENST00000380738	1b	ENSE00001871552	chr9:15510993-15510815	179	PSIP1_HUMAN	-	0	0	-	-
1.2b	ENST00000380738	2b	ENSE00002140211	chr9:15510324-15510115	210	PSIP1_HUMAN	1-24	24	0	-	-
1.3a	ENST00000380738	3a	ENSE00001132884	chr9:15506635-15506559	77	PSIP1_HUMAN	25-50	26	0	-	-
1.5	ENST00000380738	5	ENSE00001132876	chr9:15490122-15489984	139	PSIP1_HUMAN	50-96	47	0	-	-
1.7	ENST00000380738	7	ENSE00001089135	chr9:15486929-15486825	105	PSIP1_HUMAN	97-131	35	0	-	-
1.8b	ENST00000380738	8b	ENSE00001132860	chr9:15486066-15486004	63	PSIP1_HUMAN	132-152	21	0	-	-
1.9	ENST00000380738	9	ENSE00001132852	chr9:15479685-15479589	97	PSIP1_HUMAN	153-185	33	0	-	-
1.10	ENST00000380738	10	ENSE00001132844	chr9:15478550-15478475	76	PSIP1_HUMAN	185-210	26	0	-	-
1.11a	ENST00000380738	11a	ENSE00001132838	chr9:15474235-15474007	229	PSIP1_HUMAN	210-286	77	0	-	-
1.12a	ENST00000380738	12a	ENSE00001420149	chr9:15472748-15472630	119	PSIP1_HUMAN	287-326	40	0	-	-
1.14	ENST00000380738	14	ENSE00001132824	chr9:15469991-15469936	56	PSIP1_HUMAN	326-345	20	0	-	-
1.15	ENST00000380738	15	ENSE00001132819	chr9:15469334-15469264	71	PSIP1_HUMAN	345-368	24	12	C:347-368 G:347-368 K:347-368 O:347-368 S:347-368 W:347-368 a:347-368 e:347-368 i:347-368 m:347-368 q:347-368 u:347-368	22 22 22 22 22 22 22 22 22 22 22 22
1.16	ENST00000380738	16	ENSE00001132811	chr9:15469056-15468955	102	PSIP1_HUMAN	369-402	34	12	C:369-402 G:369-402 K:369-402 O:369-402 S:369-402 W:369-402 a:369-402 e:369-402 i:369-402 m:369-402 q:369-402 u:369-402	34 34 34 34 34 34 34 34 34 34 34 34
1.17	ENST00000380738	17	ENSE00001132806	chr9:15468841-15468628	214	PSIP1_HUMAN	403-474	72	12	C:403-440 G:403-440 K:403-440 O:403-440 S:403-440 W:403-440 a:403-440 e:403-440 i:403-440 m:403-440 q:403-440 u:403-440	38 38 38 38 38 38 38 38 38 38 38 38
1.18	ENST00000380738	18	ENSE00001089131	chr9:15466857-15466746	112	PSIP1_HUMAN	474-511	38	0	-	-
1.19	ENST00000380738	19	ENSE00001486085	chr9:15465578-15464064	1515	PSIP1_HUMAN	511-530	20	0	-	-

Reformat:	Number of residues per line =  ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete  aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:204
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:204
                                  1184      1194      1204      1214      1224      1234      1244      1254      1264      1274      1284      1294      1304      1314      1324      1334      1344      1354      1364      1374    
           POL_HV2RO   1175 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITTE 1378
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....................eeeeeeeee..eeeeeeee.....eeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ZF_INTEGRASE  PDB: - UniProt: 1174-1215  --------INTEGRASE  PDB: A:53-204 UniProt: 1224-1375                                                                                                             --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3f9k A    4 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTE  207
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203    

Chain B from PDB  Type:PROTEIN  Length:196
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:206
                                  1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      
           POL_HV2RO   1172 FLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITT 1377
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....----------......eeeeeeeee..eeeeeeee....eeeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --ZF_INTEGRASE  PDB: B:3-43                 --------INTEGRASE  PDB: B:54-204 UniProt: 1224-1375                                                                                                             -- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3f9k B    1 VLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQC----------VNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITT  206
                                    10        20        30        40  |      -   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
                                                                     43         54                                                                                                                                                        

Chain C from PDB  Type:PROTEIN  Length:94
 aligned with PSIP1_HUMAN | O75475 from UniProtKB/Swiss-Prot  Length:530

    Alignment length:94
                                   356       366       376       386       396       406       416       426       436    
         PSIP1_HUMAN    347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVL  440
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhee..eehhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh...hhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.15 [INCOMPLETE]Exon 1.16  PDB: C:369-402         Exon 1.17  PDB: C:403-440 [INCOMPLETE] Transcript 1
                3f9k C  347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLF  440
                                   356       366       376       386       396       406       416       426       436    

Chain E from PDB  Type:PROTEIN  Length:204
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:204
                                  1184      1194      1204      1214      1224      1234      1244      1254      1264      1274      1284      1294      1304      1314      1324      1334      1344      1354      1364      1374    
           POL_HV2RO   1175 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITTE 1378
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....................eeeeeeeee..eeeeeeee.....eeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ZF_INTEGRASE  PDB: - UniProt: 1174-1215  --------INTEGRASE  PDB: E:53-204 UniProt: 1224-1375                                                                                                             --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3f9k E    4 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTE  207
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203    

Chain F from PDB  Type:PROTEIN  Length:196
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:206
                                  1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      
           POL_HV2RO   1172 FLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITT 1377
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....----------......eeeeeeeee..eeeeeeee....eeeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --ZF_INTEGRASE  PDB: F:3-43                 --------INTEGRASE  PDB: F:54-204 UniProt: 1224-1375                                                                                                             -- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3f9k F    1 VLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQC----------VNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITT  206
                                    10        20        30        40  |      -   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
                                                                     43         54                                                                                                                                                        

Chain G from PDB  Type:PROTEIN  Length:94
 aligned with PSIP1_HUMAN | O75475 from UniProtKB/Swiss-Prot  Length:530

    Alignment length:94
                                   356       366       376       386       396       406       416       426       436    
         PSIP1_HUMAN    347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVL  440
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhee..eehhhhhhhhhhhhhh...hhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.....hhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.15 [INCOMPLETE]Exon 1.16  PDB: G:369-402         Exon 1.17  PDB: G:403-440 [INCOMPLETE] Transcript 1
                3f9k G  347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLF  440
                                   356       366       376       386       396       406       416       426       436    

Chain I from PDB  Type:PROTEIN  Length:204
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:204
                                  1184      1194      1204      1214      1224      1234      1244      1254      1264      1274      1284      1294      1304      1314      1324      1334      1344      1354      1364      1374    
           POL_HV2RO   1175 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITTE 1378
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....................eeeeeeeee..eeeeeeee.....eeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ZF_INTEGRASE  PDB: - UniProt: 1174-1215  --------INTEGRASE  PDB: I:53-204 UniProt: 1224-1375                                                                                                             --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3f9k I    4 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTE  207
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203    

Chain J from PDB  Type:PROTEIN  Length:196
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:206
                                  1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      
           POL_HV2RO   1172 FLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITT 1377
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....----------......eeeeeeeee..eeeeeeee....eeeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --ZF_INTEGRASE  PDB: J:3-43                 --------INTEGRASE  PDB: J:54-204 UniProt: 1224-1375                                                                                                             -- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3f9k J    1 VLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQC----------VNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITT  206
                                    10        20        30        40  |      -   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
                                                                     43         54                                                                                                                                                        

Chain K from PDB  Type:PROTEIN  Length:94
 aligned with PSIP1_HUMAN | O75475 from UniProtKB/Swiss-Prot  Length:530

    Alignment length:94
                                   356       366       376       386       396       406       416       426       436    
         PSIP1_HUMAN    347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVL  440
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhee..eehhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh...hhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.15 [INCOMPLETE]Exon 1.16  PDB: K:369-402         Exon 1.17  PDB: K:403-440 [INCOMPLETE] Transcript 1
                3f9k K  347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLF  440
                                   356       366       376       386       396       406       416       426       436    

Chain M from PDB  Type:PROTEIN  Length:204
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:204
                                  1184      1194      1204      1214      1224      1234      1244      1254      1264      1274      1284      1294      1304      1314      1324      1334      1344      1354      1364      1374    
           POL_HV2RO   1175 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITTE 1378
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....................eeeeeeeee..eeeeeeee.....eeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ZF_INTEGRASE  PDB: - UniProt: 1174-1215  --------INTEGRASE  PDB: M:53-204 UniProt: 1224-1375                                                                                                             --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3f9k M    4 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTE  207
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203    

Chain N from PDB  Type:PROTEIN  Length:196
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:206
                                  1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      
           POL_HV2RO   1172 FLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITT 1377
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....----------......eeeeeeeee..eeeeeeee....eeeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --ZF_INTEGRASE  PDB: N:3-43                 --------INTEGRASE  PDB: N:54-204 UniProt: 1224-1375                                                                                                             -- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3f9k N    1 VLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQC----------VNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITT  206
                                    10        20        30        40  |      -   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
                                                                     43         54                                                                                                                                                        

Chain O from PDB  Type:PROTEIN  Length:94
 aligned with PSIP1_HUMAN | O75475 from UniProtKB/Swiss-Prot  Length:530

    Alignment length:94
                                   356       366       376       386       396       406       416       426       436    
         PSIP1_HUMAN    347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVL  440
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhee..eehhhhhhhhhhhhhh...hhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh....hhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.15 [INCOMPLETE]Exon 1.16  PDB: O:369-402         Exon 1.17  PDB: O:403-440 [INCOMPLETE] Transcript 1
                3f9k O  347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLF  440
                                   356       366       376       386       396       406       416       426       436    

Chain Q from PDB  Type:PROTEIN  Length:204
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:204
                                  1184      1194      1204      1214      1224      1234      1244      1254      1264      1274      1284      1294      1304      1314      1324      1334      1344      1354      1364      1374    
           POL_HV2RO   1175 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITTE 1378
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....................eeeeeeeee..eeeeeeee.....eeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ZF_INTEGRASE  PDB: - UniProt: 1174-1215  --------INTEGRASE  PDB: Q:53-204 UniProt: 1224-1375                                                                                                             --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3f9k Q    4 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTE  207
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203    

Chain R from PDB  Type:PROTEIN  Length:196
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:206
                                  1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      
           POL_HV2RO   1172 FLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITT 1377
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....----------......eeeeeeeee..eeeeeeee....eeeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --ZF_INTEGRASE  PDB: R:3-43                 --------INTEGRASE  PDB: R:54-204 UniProt: 1224-1375                                                                                                             -- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3f9k R    1 VLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQC----------VNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITT  206
                                    10        20        30        40  |      -   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
                                                                     43         54                                                                                                                                                        

Chain S from PDB  Type:PROTEIN  Length:94
 aligned with PSIP1_HUMAN | O75475 from UniProtKB/Swiss-Prot  Length:530

    Alignment length:94
                                   356       366       376       386       396       406       416       426       436    
         PSIP1_HUMAN    347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVL  440
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhee..eehhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.....hhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.15 [INCOMPLETE]Exon 1.16  PDB: S:369-402         Exon 1.17  PDB: S:403-440 [INCOMPLETE] Transcript 1
                3f9k S  347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLF  440
                                   356       366       376       386       396       406       416       426       436    

Chain U from PDB  Type:PROTEIN  Length:204
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:204
                                  1184      1194      1204      1214      1224      1234      1244      1254      1264      1274      1284      1294      1304      1314      1324      1334      1344      1354      1364      1374    
           POL_HV2RO   1175 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITTE 1378
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....................eeeeeeeee..eeeeeeee.....eeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ZF_INTEGRASE  PDB: - UniProt: 1174-1215  --------INTEGRASE  PDB: U:53-204 UniProt: 1224-1375                                                                                                             --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3f9k U    4 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTE  207
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203    

Chain V from PDB  Type:PROTEIN  Length:196
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:206
                                  1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      
           POL_HV2RO   1172 FLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITT 1377
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....----------......eeeeeeeee..eeeeeeee....eeeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --ZF_INTEGRASE  PDB: V:3-43                 --------INTEGRASE  PDB: V:54-204 UniProt: 1224-1375                                                                                                             -- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3f9k V    1 VLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQC----------VNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITT  206
                                    10        20        30        40  |      -   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
                                                                     43         54                                                                                                                                                        

Chain W from PDB  Type:PROTEIN  Length:94
 aligned with PSIP1_HUMAN | O75475 from UniProtKB/Swiss-Prot  Length:530

    Alignment length:94
                                   356       366       376       386       396       406       416       426       436    
         PSIP1_HUMAN    347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVL  440
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhee..eehhhhhhhhhhhhhh...hhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.....hhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.15 [INCOMPLETE]Exon 1.16  PDB: W:369-402         Exon 1.17  PDB: W:403-440 [INCOMPLETE] Transcript 1
                3f9k W  347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLF  440
                                   356       366       376       386       396       406       416       426       436    

Chain Y from PDB  Type:PROTEIN  Length:204
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:204
                                  1184      1194      1204      1214      1224      1234      1244      1254      1264      1274      1284      1294      1304      1314      1324      1334      1344      1354      1364      1374    
           POL_HV2RO   1175 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITTE 1378
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....................eeeeeeeee..eeeeeeee.....eeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ZF_INTEGRASE  PDB: - UniProt: 1174-1215  --------INTEGRASE  PDB: Y:53-204 UniProt: 1224-1375                                                                                                             --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3f9k Y    4 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTE  207
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203    

Chain Z from PDB  Type:PROTEIN  Length:196
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:206
                                  1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      
           POL_HV2RO   1172 FLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITT 1377
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....----------......eeeeeeeee..eeeeeeee....eeeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --ZF_INTEGRASE  PDB: Z:3-43                 --------INTEGRASE  PDB: Z:54-204 UniProt: 1224-1375                                                                                                             -- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3f9k Z    1 VLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQC----------VNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITT  206
                                    10        20        30        40  |      -   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
                                                                     43         54                                                                                                                                                        

Chain a from PDB  Type:PROTEIN  Length:94
 aligned with PSIP1_HUMAN | O75475 from UniProtKB/Swiss-Prot  Length:530

    Alignment length:94
                                   356       366       376       386       396       406       416       426       436    
         PSIP1_HUMAN    347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVL  440
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhee..eehhhhhhhhhhhhhh...hhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh...hhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.15 [INCOMPLETE]Exon 1.16  PDB: a:369-402         Exon 1.17  PDB: a:403-440 [INCOMPLETE] Transcript 1
                3f9k a  347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLF  440
                                   356       366       376       386       396       406       416       426       436    

Chain c from PDB  Type:PROTEIN  Length:204
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:204
                                  1184      1194      1204      1214      1224      1234      1244      1254      1264      1274      1284      1294      1304      1314      1324      1334      1344      1354      1364      1374    
           POL_HV2RO   1175 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITTE 1378
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....................eeeeeeeee..eeeeeeee.....eeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ZF_INTEGRASE  PDB: - UniProt: 1174-1215  --------INTEGRASE  PDB: c:53-204 UniProt: 1224-1375                                                                                                             --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3f9k c    4 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTE  207
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203    

Chain d from PDB  Type:PROTEIN  Length:196
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:206
                                  1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      
           POL_HV2RO   1172 FLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITT 1377
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....----------......eeeeeeeee..eeeeeeee....eeeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --ZF_INTEGRASE  PDB: d:3-43                 --------INTEGRASE  PDB: d:54-204 UniProt: 1224-1375                                                                                                             -- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3f9k d    1 VLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQC----------VNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITT  206
                                    10        20        30        40  |      -   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
                                                                     43         54                                                                                                                                                        

Chain e from PDB  Type:PROTEIN  Length:94
 aligned with PSIP1_HUMAN | O75475 from UniProtKB/Swiss-Prot  Length:530

    Alignment length:94
                                   356       366       376       386       396       406       416       426       436    
         PSIP1_HUMAN    347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVL  440
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhee..eehhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.....hhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.15 [INCOMPLETE]Exon 1.16  PDB: e:369-402         Exon 1.17  PDB: e:403-440 [INCOMPLETE] Transcript 1
                3f9k e  347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLF  440
                                   356       366       376       386       396       406       416       426       436    

Chain g from PDB  Type:PROTEIN  Length:204
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:204
                                  1184      1194      1204      1214      1224      1234      1244      1254      1264      1274      1284      1294      1304      1314      1324      1334      1344      1354      1364      1374    
           POL_HV2RO   1175 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITTE 1378
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....................eeeeeeeee..eeeeeeee.....eeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ZF_INTEGRASE  PDB: - UniProt: 1174-1215  --------INTEGRASE  PDB: g:53-204 UniProt: 1224-1375                                                                                                             --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3f9k g    4 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTE  207
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203    

Chain h from PDB  Type:PROTEIN  Length:196
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:206
                                  1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      
           POL_HV2RO   1172 FLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITT 1377
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....----------......eeeeeeeee..eeeeeeee....eeeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --ZF_INTEGRASE  PDB: h:3-43                 --------INTEGRASE  PDB: h:54-204 UniProt: 1224-1375                                                                                                             -- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3f9k h    1 VLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQC----------VNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITT  206
                                    10        20        30        40  |      -   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
                                                                     43         54                                                                                                                                                        

Chain i from PDB  Type:PROTEIN  Length:94
 aligned with PSIP1_HUMAN | O75475 from UniProtKB/Swiss-Prot  Length:530

    Alignment length:94
                                   356       366       376       386       396       406       416       426       436    
         PSIP1_HUMAN    347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVL  440
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhee..eehhhhhhhhhhhhhh...hhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh....hhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.15 [INCOMPLETE]Exon 1.16  PDB: i:369-402         Exon 1.17  PDB: i:403-440 [INCOMPLETE] Transcript 1
                3f9k i  347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLF  440
                                   356       366       376       386       396       406       416       426       436    

Chain k from PDB  Type:PROTEIN  Length:204
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:204
                                  1184      1194      1204      1214      1224      1234      1244      1254      1264      1274      1284      1294      1304      1314      1324      1334      1344      1354      1364      1374    
           POL_HV2RO   1175 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITTE 1378
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....................eeeeeeeee..eeeeeeee.....eeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ZF_INTEGRASE  PDB: - UniProt: 1174-1215  --------INTEGRASE  PDB: k:53-204 UniProt: 1224-1375                                                                                                             --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3f9k k    4 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTE  207
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203    

Chain l from PDB  Type:PROTEIN  Length:196
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:206
                                  1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      
           POL_HV2RO   1172 FLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITT 1377
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....----------......eeeeeeeee..eeeeeeee....eeeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --ZF_INTEGRASE  PDB: l:3-43                 --------INTEGRASE  PDB: l:54-204 UniProt: 1224-1375                                                                                                             -- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3f9k l    1 VLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQC----------VNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITT  206
                                    10        20        30        40  |      -   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
                                                                     43         54                                                                                                                                                        

Chain m from PDB  Type:PROTEIN  Length:94
 aligned with PSIP1_HUMAN | O75475 from UniProtKB/Swiss-Prot  Length:530

    Alignment length:94
                                   356       366       376       386       396       406       416       426       436    
         PSIP1_HUMAN    347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVL  440
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhee..eehhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh...hhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.15 [INCOMPLETE]Exon 1.16  PDB: m:369-402         Exon 1.17  PDB: m:403-440 [INCOMPLETE] Transcript 1
                3f9k m  347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLF  440
                                   356       366       376       386       396       406       416       426       436    

Chain o from PDB  Type:PROTEIN  Length:204
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:204
                                  1184      1194      1204      1214      1224      1234      1244      1254      1264      1274      1284      1294      1304      1314      1324      1334      1344      1354      1364      1374    
           POL_HV2RO   1175 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITTE 1378
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....................eeeeeeeee..eeeeeeee.....eeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ZF_INTEGRASE  PDB: - UniProt: 1174-1215  --------INTEGRASE  PDB: o:53-204 UniProt: 1224-1375                                                                                                             --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3f9k o    4 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTE  207
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203    

Chain p from PDB  Type:PROTEIN  Length:196
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:206
                                  1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      
           POL_HV2RO   1172 FLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITT 1377
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....----------......eeeeeeeee..eeeeeeee....eeeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --ZF_INTEGRASE  PDB: p:3-43                 --------INTEGRASE  PDB: p:54-204 UniProt: 1224-1375                                                                                                             -- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3f9k p    1 VLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQC----------VNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITT  206
                                    10        20        30        40  |      -   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
                                                                     43         54                                                                                                                                                        

Chain q from PDB  Type:PROTEIN  Length:94
 aligned with PSIP1_HUMAN | O75475 from UniProtKB/Swiss-Prot  Length:530

    Alignment length:94
                                   356       366       376       386       396       406       416       426       436    
         PSIP1_HUMAN    347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVL  440
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhee..eehhhhhhhhhhhhhh...hhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh....hhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.15 [INCOMPLETE]Exon 1.16  PDB: q:369-402         Exon 1.17  PDB: q:403-440 [INCOMPLETE] Transcript 1
                3f9k q  347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLF  440
                                   356       366       376       386       396       406       416       426       436    

Chain s from PDB  Type:PROTEIN  Length:204
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:204
                                  1184      1194      1204      1214      1224      1234      1244      1254      1264      1274      1284      1294      1304      1314      1324      1334      1344      1354      1364      1374    
           POL_HV2RO   1175 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITTE 1378
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....................eeeeeeeee..eeeeeeee.....eeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ZF_INTEGRASE  PDB: - UniProt: 1174-1215  --------INTEGRASE  PDB: s:53-204 UniProt: 1224-1375                                                                                                             --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3f9k s    4 KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTE  207
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203    

Chain t from PDB  Type:PROTEIN  Length:196
 aligned with POL_HV2RO | P04584 from UniProtKB/Swiss-Prot  Length:1464

    Alignment length:206
                                  1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      
           POL_HV2RO   1172 FLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAIHCMNFKRRGGIGDMTPSERLINMITT 1377
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhh....----------......eeeeeeeee..eeeeeeee....eeeeeee...hhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhh.eeee.........hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh........hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --ZF_INTEGRASE  PDB: t:3-43                 --------INTEGRASE  PDB: t:54-204 UniProt: 1224-1375                                                                                                             -- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3f9k t    1 VLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQC----------VNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITT  206
                                    10        20        30        40  |      -   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200      
                                                                     43         54                                                                                                                                                        

Chain u from PDB  Type:PROTEIN  Length:94
 aligned with PSIP1_HUMAN | O75475 from UniProtKB/Swiss-Prot  Length:530

    Alignment length:94
                                   356       366       376       386       396       406       416       426       436    
         PSIP1_HUMAN    347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVL  440
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhee..eehhhhhhhhhhhhhh...hhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh....hhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
               Transcript 1 Exon 1.15 [INCOMPLETE]Exon 1.16  PDB: u:369-402         Exon 1.17  PDB: u:403-440 [INCOMPLETE] Transcript 1
                3f9k u  347 SMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVLEVLF  440
                                   356       366       376       386       396       406       416       426       436    

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'