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(-) Description

Title :  CRYSTAL STRUCTURE OF THE PVCB (PA2255) PROTEIN FROM PSEUDOMONAS AERUGINOSA
 
Authors :  A. M. Gulick, E. J. Drake
Date :  26 Aug 08  (Deposition) - 14 Oct 08  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  X
Biol. Unit 1:  X  (3x)
Keywords :  Pvcb, Paerucumarin, Fe/Alpha-Ketoglutarate Dependent Hydroxylase, 2-Isocyano-6, 7-Dihydroxycoumarin, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. J. Drake, A. M. Gulick
Three-Dimensional Structures Of Pseudomonas Aeruginosa Pvca And Pvcb, Two Proteins Involved In The Synthesis Of 2-Isocyano-6, 7-Dihydroxycoumarin.
J. Mol. Biol. V. 384 193 2008
PubMed-ID: 18824174  |  Reference-DOI: 10.1016/J.JMB.2008.09.027
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PYOVERDINE BIOSYNTHESIS PROTEIN PVCB
    Chains: X
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15BTEV
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: PVCB, PA2255
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 287
    Strain: PA01

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : X
Biological Unit 1 (3x): X

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1NA1Ligand/IonSODIUM ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1NA-1Ligand/IonSODIUM ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHOH X:422BINDING SITE FOR RESIDUE NA X 304

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3EAT)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Glu X:280 -Pro X:281

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3EAT)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 3EAT)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain X from PDB  Type:PROTEIN  Length:278
 aligned with Q9I1L4_PSEAE | Q9I1L4 from UniProtKB/TrEMBL  Length:291

    Alignment length:293
                              1                                                                                                                                                                                                                                                                                                  
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288   
         Q9I1L4_PSEAE     - --MNAYLSDQPVRLSPLRDEQGNQPRFGLLLEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADAESLTRYCHDFGEVMLWPFGAVLELVEQEGAEDHIFANNYVPLHWDGMYLETVPEFQVFHCVDAPGDSDGGRTTFSSTPAALQLADSSELELWRRASGRYQRSAAHYSSRSAAPIVERHPRREFPILRFCEPPVEGDASFINPSEFHYDGIAPEQRGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAFAHRAPRHLRRVHIHAEPALRNPHLQRD 291
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eeeee............eeeee.....hhhhhhhhhhhhhhhhhheeee.......hhhhhhhhhhhhh..........eeeee.............eeee.......eeeeeeeeeeee.........eeeeehhhhhhhhhhhhhhhhhhheeeee.-----..eeeee.eee......eee......----------..eeee.....hhhhhhhhhhhhhh....eeee......eeeee...eeeee........eeeeeeeeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3eat X  -1 GHMNAYLSDQPVRLSPLRDEQGNQPRFGLLLEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADAESLTRYCHDFGEVMLWPFGAVLELVEQEGAEDHIFANNYVPLHWDGMYLETVPEFQVFHCVDAPGDSDGGRTTFSSTPAALQLADSSELELWRRASGRYQR-----SSRSAAPIVERHPRREFPILRFCEPP----------SEFHYDGIAPEQRGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAFAHRAPRHLRRVHIHAEPALRNPHLQRD 291
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168     | 178       188       198|        - |     218       228       238       248       258       268       278       288   
                                                                                                                                                                                                   168   174                      199        210
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3EAT)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3EAT)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3EAT)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain X   (Q9I1L4_PSEAE | Q9I1L4)
molecular function
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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