Chain A from PDB Type:PROTEIN Length:202
aligned with B8FW11_DESHD | B8FW11 from UniProtKB/TrEMBL Length:232
Alignment length:209
27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217
B8FW11_DESHD 18 NFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLACLKRENILDKKKNKIIVYNLGELKHLS 226
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhh......ee....eee........ee......eeeeeee...eeeeeeee................eeee...ee..eehhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh-------.hhhhhhhhhhhhhhhh.ee..ee......hhhhhhhhh..hhhhhhhhhhhhhhhh.ee......ee.hhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3e5q A 18 NFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQV-------PTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLACLKRENILDKKKNKIIVYNLGELKHLS 226
27 37 47 57 67 77 87 97 107 117 127 137 | - | 157 167 177 187 197 207 217
141 149
Chain B from PDB Type:PROTEIN Length:201
aligned with B8FW11_DESHD | B8FW11 from UniProtKB/TrEMBL Length:232
Alignment length:208
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218
B8FW11_DESHD 19 FFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLACLKRENILDKKKNKIIVYNLGELKHLS 226
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhheeeee....eee........eeeeeeeeeeeeee.......eeeee....eee.......eeeeeeeeeeeeeeehhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh-------hhhhhhhhhhhhhh...eee..eeee....hhhhhhhhhh.hhhhhhhhhhhhhhh..ee.....eee.hhhhhhhhh Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3e5q B 19 FFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQV-------PTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLACLKRENILDKKKNKIIVYNLGELKHLS 226
28 38 48 58 68 78 88 98 108 118 128 138 | -| 158 168 178 188 198 208 218
141 149
Chain C from PDB Type:PROTEIN Length:203
aligned with B8FW11_DESHD | B8FW11 from UniProtKB/TrEMBL Length:232
Alignment length:209
27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217
B8FW11_DESHD 18 NFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLACLKRENILDKKKNKIIVYNLGELKHLS 226
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhheeeee....eee........eeee....eeeee........eeeee...eeee........eeeee...eeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.------....hhhhhhhhhh...eee..eeee....hhhhhhhhhh...hhhhhhhhhhhhh..ee.....eee..hhhhhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3e5q C 18 NFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVA------PTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLACLKRENILDKKKNKIIVYNLGELKHLS 226
27 37 47 57 67 77 87 97 107 117 127 137 | - | 157 167 177 187 197 207 217
142 149
Chain D from PDB Type:PROTEIN Length:201
aligned with B8FW11_DESHD | B8FW11 from UniProtKB/TrEMBL Length:232
Alignment length:208
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218
B8FW11_DESHD 19 FFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLACLKRENILDKKKNKIIVYNLGELKHLS 226
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhheeeee..............eeeee....eeeee........eee......eeee.......eeeee...eeeeeehhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh-------hhhhhhhhhhhhhhhhh......eeee....hhhhhhhh..hhhhhhhhhhhhhh...ee....eeee..hhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3e5q D 19 FFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQV-------PTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLACLKRENILDKKKNKIIVYNLGELKHLS 226
28 38 48 58 68 78 88 98 108 118 128 138 | -| 158 168 178 188 198 208 218
141 149
Chain E from PDB Type:PROTEIN Length:203
aligned with B8FW11_DESHD | B8FW11 from UniProtKB/TrEMBL Length:232
Alignment length:209
27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217
B8FW11_DESHD 18 NFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLACLKRENILDKKKNKIIVYNLGELKHLS 226
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhheeeee....eee........eee.....eeeeee.....eeeeeee....eee.......eeeeee...eeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.------hhhhhhhhhhhhhh...ee....eeee...hhhhhhhhh..hhhhhhhhhhhhhhh..eee...eeee.hhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3e5q E 18 NFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVA------PTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLACLKRENILDKKKNKIIVYNLGELKHLS 226
27 37 47 57 67 77 87 97 107 117 127 137 | - | 157 167 177 187 197 207 217
142 149
Chain F from PDB Type:PROTEIN Length:203
aligned with B8FW11_DESHD | B8FW11 from UniProtKB/TrEMBL Length:232
Alignment length:208
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218
B8FW11_DESHD 19 FFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLACLKRENILDKKKNKIIVYNLGELKHLS 226
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhheeeee....eee.......eeeeeee..eeeee........eeeee....eeee.......eeeee...eeeeeehhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....-----hhhhhhhhhhhhhhhh.eee..eee.....hhhhhhhhhh.hhhhhhhhhhhhhhh..eeee..eeee.hhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3e5q F 19 FFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAE-----PTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLACLKRENILDKKKNKIIVYNLGELKHLS 226
28 38 48 58 68 78 88 98 108 118 128 138 | -| 158 168 178 188 198 208 218
143 149
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |